Prionailurus bengalensis (leopard cat): 122474495
Help
Entry
122474495 CDS
T07574
Symbol
FOCAD
Name
(RefSeq) focadhesin isoform X1
KO
K27498
focadhesin
Organism
pbg
Prionailurus bengalensis (leopard cat)
Brite
KEGG Orthology (KO) [BR:
pbg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pbg03019
]
122474495 (FOCAD)
Messenger RNA biogenesis [BR:
pbg03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Other 3'-5' decay factors
122474495 (FOCAD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Focadhesin
DUF3730
HEAT
Motif
Other DBs
NCBI-GeneID:
122474495
NCBI-ProteinID:
XP_043421323
LinkDB
All DBs
Position
D4:45177145..45492849
Genome browser
AA seq
1805 aa
AA seq
DB search
MSDDIRKRFEFPNSLIQSQAVGHLIAAVLKESGFSEKIHQSTDQTPALNLLWEKCCGDNA
VVRTACCEALVALVAQDHAEFSYVLNGILNLIPSTRNTHGLLKAIMKLLQMQALKEGQGG
EKNIRNLYTIRNRPQPLITVLEHRPDCWPVLLQQLTAFFQRCPERSEVSCIQIMAPFLWY
LYCEPSQLEEYAKLRLTLLKVLLQPRVPGDTEQPSTLEQQILQLCCDMVPCLQVKDLVQT
TEVMTFIEEVYLSLLRHPIFWKIQLSQLTLQLLCVCEVSLKITGECSSLIHLLEHSVELL
KEDFPVELVIIGIALLLLQTPASQQKPILSLALKLVSFAEGQKIPKASLVLVMPLLQILS
STALEDCMSTDEEGPSRQQLALNLLEIVQQESCRDDRQKLSYKLAFPIAGMYGSIFTAWR
ILEVMREKSAASDWLFSVESLLPITTVIPAHVFLLLAHLLVEDQGQNLRQILKVTTELAQ
ADSSQVPNLIPVLMFKLGRPLEPVLYNDILYTLPTLGVHKVCIGQILRVIQLLGTTPHLR
AVTVRLLTSLWEKQDRVYPELQRFMAMSDVPSLSVGKEVQWEKLIAKAASIRDICKQRPY
QHGADMLAAISQVLNECTKPDQATPAALVLQGLHALCQAEVVCIRSTWNALSPKLSCDTR
PLILKTLSELFSLVPSLTVNTAEYENFKVQVLSFLWTHTQNKESIVANAAYKSLSHFSAG
EHTVLHLPEEIRPEIPIPDELEEDEDDEGDEKDLDLSIPGSCYLKLLSLTAPLVFPALEE
FFTSLVKQEMVNMPRGVYHSALKGGVRSDQGKTVAGIPNFILKMYETNKQPGLKPGLAGG
MLFCYDISTYQSKEGKPLNRLMASRGRSFKQTSLALVHEVHIQLSEWHRAIFLPQAWLAY
MSRAYHAILQGRIGELDLQLKHGKEGPEEVQYKKGTAWLWVRDMLTDEITKTAVKESPVV
KGNALLALSSLAVVVSRHEASLSSDSEGVPEVHPNFLSMKEWVSMVSDTLLVIVDSHHQP
RGQIFSSFYYKSYSGENTASAIARSAAATALSLLVQVFIISCKEKVEEILNMLTARLPGK
PRADESQAVQIHMGLALGMFLSRLCEEKLSDVSGQQMNLLLMKSLDALENCCFDASLEYN
TGCILGVGLVLSLMSHSSRMESRVHVAASLRKLSTYLDDSGSQSRTFQEVLAYTLSCVCT
SAFSAGIIEATEAEDIMNKLQLLVENNQQTSGFALALGNLVHGLSVCGHGKAEDLGHRLL
PAWIRIVLTEGTPTMLCLAALHGMVALVGSEGDVMQLKAEAIQTSHFQARLNEVIKTVTQ
VISVSGVIGLQSNALWLLGHLHLSTLSSSQSRTSVPTDYSYLPESSFIRAAIGFFITGGK
KGPESVPPSLLKVVMKPIAAVGESYQFPPVSWAALLSPLMRLNFGEEIQQLCLEIMVTQA
QSSQNAAALLGLWVMPPLIHSLSLNAKKYLLVSTPLWIKHVSDEQMAGFVENLMVAVFKT
ASPLPNPELCISALQGLSQAMKLPSPAHHLWSLLCEATGKIFDLLPKKIRRNDLELYISV
AKCLSEMTDDEANRVAQITESSVEKAAFVRLYLVSQGRFPLTGLTDILSVAIQHREKDTL
AWMVLHGLYQARIVSHANTGVLKRMEWLLELMGYIRNLAYQSTSVQNVALDEALDFLLLI
FAIAVVAWADHAAPLLLGLSASWLPWHRENGPAGSASSFLGRSPMHRVTLQETLTLLPSS
MPILLQKEPWKEQTQKFIDWLFSIMESPKGGLSAKSRDLLKATLLSLRILPEFKKKAVWT
RAYGW
NT seq
5418 nt
NT seq
+upstream
nt +downstream
nt
atgtcagatgatatcaggaaaaggtttgaatttccaaattctcttatccaatcacaggct
gtgggtcatctcattgctgccgtcctaaaggaaagtggtttttcagaaaagatccaccaa
tccacagaccagactccggctttgaacttgctgtgggagaagtgttgcggtgataatgcg
gtggttcgaacggcctgctgcgaggctctggtggcactcgtcgcccaggatcacgcagag
ttcagctatgtgctcaatgggatactcaacctgattccgtcgaccaggaatacacatggc
ttgctaaaagccattatgaagttattacaaatgcaagctctaaaggaaggacaaggtggg
gagaagaatattcggaatttatatactataagaaatcgtcctcagcctttgatcactgtg
cttgaacatagacctgattgctggccagtacttttgcagcagctgacggcttttttccag
cgatgtcctgaaaggtcagaagtctcatgcatccaaataatggcaccatttctgtggtat
ctgtattgtgaaccatctcagttagaagaatatgctaaactccgactaaccctgctgaaa
gtcttacttcagccccgggttcctggtgacacagaacagccatcaacattggaacaacag
atacttcaactgtgctgtgacatggttccatgtctgcaggtaaaagatttggtccagaca
acagaagtgatgacgtttattgaagaagtatatttaagccttctgcgtcatcccattttc
tggaaaattcagcttagccagctgacccttcagctcttgtgtgtctgtgaagtcagctta
aagataactggggaatgctcctcgttaattcaccttttagagcacagcgttgaacttctg
aaggaggattttcctgttgaactggtcataattggaatagctttactgcttctacagact
ccagcaagtcagcagaagccgatcttaagtctggctctgaagctcgtctcttttgctgag
ggtcagaaaatcccaaaggcctccttggtgctggtgatgccccttctgcagatcctgtct
tctactgccttggaagactgtatgtccacggacgaagaaggtccctctaggcagcagttg
gctctaaaccttttggaaatagtacagcaggaatcctgcagagacgaccgccagaagctc
tcctacaagcttgcgttccccatagccggcatgtatggatcaatatttacagcctggagg
atcctcgaagtaatgagagaaaagtctgctgcaagtgactggttgttttccgtagagtcc
ttgctccctataaccacagtaatccctgcccatgtttttcttttgttggctcacctcctt
gttgaagatcaaggacaaaatcttcgccaaatactgaaggtcactacagaattggcccaa
gcagattcctctcaggtaccgaatctgattccagttttgatgttcaaattgggaagacca
ctggaacctgtattatataatgatatcttgtatactttgcctacacttggtgttcacaag
gtgtgcataggacaaattctacgagtgatccaacttcttggaactactccacacctaaga
gctgtcactgtgcgcttgttgacatctttgtgggaaaagcaggatcgtgtatatcctgaa
ctgcagcgtttcatggccatgtctgacgtgccttctctgtctgtgggcaaagaagtccag
tgggagaaactcatcgctaaagcagcatcgataagagacatatgtaagcaaaggccctat
cagcacggagcagacatgttggcagccatttcccaggtgttgaatgagtgcaccaaacct
gaccaagccactccagcagccttggtgctacaaggtcttcatgccctctgccaagctgag
gttgtttgcattcgctccacgtggaatgctctctccccgaagctcagctgtgacacgaga
cctctcattttgaagaccctcagtgaactgttctctctggttccttccttgacagtcaat
acagctgaatatgagaattttaaagtccaagtcctcagcttcctctggacccacactcaa
aacaaggaatcaattgtagcaaacgctgcctataaatctctgtcacattttagcgcggga
gagcataccgttcttcatctgcccgaagagataagaccggaaatccctattcctgatgag
ctagaagaagatgaagatgatgagggtgatgaaaaggatctggatctttccatccctggc
tcttgctatctcaaactattgtcacttactgctcctttggtttttccagctttggaggaa
ttttttacatctcttgtgaagcaagaaatggtgaatatgccccgtggagtatatcactct
gcattaaaaggaggtgttcgctcagaccaaggaaagaccgtagcaggaatccccaatttt
atattgaaaatgtatgaaacaaacaagcaaccgggtttgaaacctggccttgcaggtggt
atgttattttgttatgatatttcaacgtaccagagtaaagaaggcaaaccattgaatcga
ctgatggccagtagagggcgaagtttcaagcagacctcgcttgctcttgtgcatgaggtt
cacatccagctttctgagtggcaccgtgcgattttcctgccacaggcctggcttgcgtat
atgagtcgagcctaccatgccattttacagggcagaataggagaactggatttgcagttg
aaacatgggaaggaaggacccgaggaggtgcagtacaaaaaaggcacagcctggctctgg
gtccgagacatgttgactgatgagatcaccaagacggctgtgaaggagagcccagtggtc
aagggcaacgcgctgttagccttaagcagccttgctgtcgtcgtatccagacacgaagcc
agcctctcctccgactctgagggggtcccggaggttcatcctaatttcctttcaatgaaa
gagtgggtttccatggtgtctgatactctcctggtcattgtggatagccatcaccaaccc
agaggacaaatcttctcctcattttattataaatcctattctggtgaaaacacagccagt
gccattgcccgctcggctgccgccacggctttgtctctcctcgtgcaagttttcattatc
tcttgcaaagagaaggttgaggaaatcctcaacatgctgactgccaggttacctgggaaa
ccaagagctgatgagtctcaagccgtgcaaatccacatgggccttgctttggggatgttt
ctgtcccgcttgtgtgaggagaaactcagtgatgtatctggccaacagatgaacctcctt
ctgatgaagtctttggatgccctggaaaattgctgctttgatgctagtcttgaatataac
acgggctgtatattgggagttggacttgttctgtccctcatgagccacagcagccgaatg
gagtctcgagttcatgtggcagcatcacttcggaagctgtctacctacctggatgacagt
gggagccaaagcagaacatttcaggaggtccttgcctataccctcagctgtgtatgcaca
tcagcattcagtgccggaatcattgaggctaccgaggctgaagatatcatgaacaagctt
cagctgttggtagaaaacaaccaacagacgtcaggttttgccctagcgttaggaaacctg
gttcacggattgtctgtgtgtggacacggaaaagcggaggacttgggccaccggctgctc
cctgcctggatcagaattgtcctgacagagggcactccgacaatgctctgccttgcagct
cttcatggcatggtggccttggtgggctctgaaggggatgtaatgcagctgaaggcagaa
gccatccagacctctcattttcaagccagacttaatgaagtcattaaaactgtaactcag
gtcatcagcgtgtctggagtgattggtcttcagtcaaatgcgctctggcttctgggccat
cttcatctgtctaccctgtcctcgagtcaaagcaggacctccgttcctaccgactatagc
tatttgcccgagagcagttttattagagcagccattggcttcttcattacaggaggaaaa
aaaggtcctgagtctgtgcctccttcccttctcaaagtcgtgatgaaacccatcgcagct
gttggagagagctaccagttcccccccgtgagctgggccgcgctcctctcgccactcatg
aggctaaacttcggagaagaaatacagcagctgtgcctggaaattatggtgacgcaggcg
caatcatcccagaatgcagctgcgctgttgggactgtgggtgatgccaccactgatccac
agtctgagtttgaacgccaagaaatacctcctggtttctacacctctgtggataaaacac
gtctcagacgaacagatggcgggttttgttgaaaacttaatggtggcggtgtttaaaacg
gcttccccacttcccaaccccgagttatgcatcagtgccttacagggcctgagtcaggcc
atgaaactgcccagccctgcccaccacctctggagtctgctctgcgaagccaccgggaag
atttttgaccttctgccaaagaagattcggagaaatgatctagagctctatatcagcgta
gcaaaatgcctctcagaaatgacagatgatgaagccaatcgagttgcccagattactgag
agcagcgtagaaaaggctgcctttgtcagactgtacttggtctctcaaggacgattcccc
ttgacgggcttgactgatatactcagcgttgctattcagcaccgtgaaaaagacacacta
gcttggatggtactgcacggtttataccaagcccggattgtgagccatgccaacacaggc
gtgttgaagagaatggaatggctcttggaactgatgggttacatcagaaaccttgcatac
cagtctacctctgttcagaacgtggctcttgacgaggctttggacttcttgttgctgata
tttgcaatcgcagtggttgcatgggcagaccacgcggcccctctcctccttggccttagt
gccagttggttgccatggcatcgggaaaatggcccagctgggtcagcttcgagcttcctt
ggcaggagtccaatgcacagggtcactctgcaggagactctcactctccttcccagtagc
atgcctattctgctgcagaaagagccatggaaggaacagacccagaagttcattgactgg
ctcttcagcatcatggaaagccccaaaggaggcctctcagccaaatccagggatcttttg
aaagccaccctgctgtccttgagaattctcccagagtttaagaagaaagccgtatggacc
agagcgtatggttggtga
DBGET
integrated database retrieval system