Prionailurus bengalensis (leopard cat): 122474689
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Entry
122474689 CDS
T07574
Symbol
VPS13A
Name
(RefSeq) vacuolar protein sorting-associated protein 13A isoform X1
KO
K19525
vacuolar protein sorting-associated protein 13A/C
Organism
pbg
Prionailurus bengalensis (leopard cat)
Brite
KEGG Orthology (KO) [BR:
pbg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pbg04131
]
122474689 (VPS13A)
Membrane trafficking [BR:
pbg04131
]
Endosome - Golgi transport
Rab GTPases and associated proteins
Rab associated proteins
122474689 (VPS13A)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
VPS13_N
VPS13_M
VPS13_VAB
VPS13_C
RRM_fung
Motif
Other DBs
NCBI-GeneID:
122474689
NCBI-ProteinID:
XP_043421660
LinkDB
All DBs
Position
D4:18720752..18984982
Genome browser
AA seq
3172 aa
AA seq
DB search
MVFESVVVDVLNRFLGDYVVNLDTSQLTLGIWGGAVALKNLEIKENALSQLDVPFKVKVG
HIGNLNLTIPWKNLYTQPVEAVLEDIYLLIVPSSQIKYDPVKEEKQLLEAKQYELKRIEE
AKQKVADQEKHQVEKPDTFTEKLITQIIKNLQVKISNIHIRYEDDITNRDNPLSFGISLQ
NLSMQTTDQFWIPCLHDETEKLFRKLIRLDNLFAYWNVKSQLFYLNDYDESLDSLRNGIV
NKNIVPEGYDFVFRPISANAKLQMNRRSDFDFSAPKINLEVELHEIAIEFNKPQYFSIME
LLESVDMMTQNLPYRKFKPDVPLHYHAREWWTYAIHGILEVNVCPRLRMWSWKYIREHRQ
KMKQYKELYKKKITTKKPTGELLLSLQELEKILDVFNITISRQQAEVEVKKAGYRIYREG
AKDSEDNKGWFSWLWTWSEPRSKEQPDVKPGILEEMLTPEEKVLLYEAIGYSETAVDPTL
PKTFEAMKFFVHLKSMSIVLREKRETPELLDIVVEEFSTLIVQRPGAQAIKFETKIDSFH
VTGLPDNSTKPHLLSSLDDATSLFQIIFEINPLDETAAQRCIIEAEPLEMIYDARTVNSI
VEFFRPPKEVNLAQLTSATLIKLEEFRDKTATGLLYIIETQKVLDLKIDLKASYVIIPQD
GIFSPTSNLLILDLGHLKVTSKSRLELPDMKQGGARLEEIMHRAYDSFDVQLTSIQLLYS
TVGDNWKEARKLNVSTQHILIPMHFNVELAKAMVFMDIRMPKFKIFGKLPLISLRISDKK
LQGILELIESIPKPTPATETYAPVKPFQIQRSTSLGTSQISQKVLPLLELPCVEDDSEEE
FFDALCSPLEEPPQSPTGVKSCQQKKFQKPDYTKNMIQYKIRFEVPEVLIQFYHLVGDCE
LPVVEIDVLGLGTDVELRTFDLKANAFLKEFCLKCPEYFDENKKPVYLITTLDNTMEDLL
TLEYVKAEKNLPNLKSTYNNVVQLIKVNFSSLDIHLHTEALLNTINYFNNVLPQLEEKRA
SVSVAETEDKGEVIKKMSLKLPKNEDIITLQILAELSCLQIFIQDQKRNISEIKIEGLDS
EIIMRTSATEINAKLRNIIVLDSDKTALYKKAVYITGKEVFSFKMVSFVDATAGSAYTDM
NVVDVQVTLTVGCIEVVFVTKFLCSILAFIDNFQAAKQALAEATVQAAGMAATGVKELAQ
RSSRMSLDVNIKAPVVVIPQSPVSENVFVADFGLITMTNTFHIITESQSNPPPIIDLITI
RLSEMRLYRSQFIDDTYQEVLDLLLPLNLEVIVERNLSWEWYQEVPCFNVNAQLKPMEFI
LSQEDLTTIFKTLHGNVWYEEGYGASPAGVKDEHSITSGASNASHHLEGTTVVTAAVVEI
HSQASQVKTTLNMSFKTDYLTMVLYSPSPEQTSFTDVRDPALKLAEFKLENIISTAKMYT
DDSVFSSFSLKNCILDDKRPHVKKATPRMIGLTVGFDKKDMMDVKYRKVRDGLVTDLVLQ
EMYICASVEFLLTVANVFLEAFTTGTAIETSVQTWTAKEEVPVQEKEKWEVNIIIKNPEI
VFVADMTRSDAPALVITTQCEICWKGDRENSTMTAAIKDLQVRACPFLPVKRKGRITTVL
QPCDLFYQATQISANPQVIDISVKSLTLKVSPVIINTVITITSALYTSKETIPEDTASST
AHLWEKKDTKSLKMWFLEEPNEVENKAPTTELILRGEIIRVNIDSIFIVLEAGVGHRTVP
MLLAKSRFSGEGKNWSSLINLYCQLELEVHYYNEMFGVWEPLLEPLEIDQTEDFRPWNLG
IKMKKKAKMAIVESDTEEENYKVPEYKTVISFHSKDQLNITLSKCGLVMLNNLAKAFTEA
ATGASAVIIRDLAPFMILNSLGLPVSVSPSDSFSVLNVPLARSYVLKNEESLSMDYVGTK
DNDHFNAMTSLSSKLFFILLTPTNHSTADKIPLTKVGRRLYTVRHRESGVERSIVCQVDG
VEGSKKVTIRSPVQIKNHFSIPLSVYEGDTSLGTASPGSEFNIPLTSYRSPLSLKPEDED
YEVCERIDFEEIIKNEGTLLKKICRSTNAAKKPFIINVVPEKDNLASLSVYSEDGWDLPY
IMHLWPPILLRNLLPYKIAYYIEGIEHRVYTLNEGQSAHICTAQLDKARLHLKLLDYLNH
DWKSEYCIKPNQQDISFINFTCVTEIEKTDLDIAIHVTYNIGQTVVAFHSPYWMVNKTGR
MLQYKADGIHRKHPPNYKKPILFSFQPKHFFNNNKVQLMVTDSELSDQFSIDTVGSHGAV
KCKGLKMEYQVGVTIDLSSFNITRIVTFTPLYMIENKSKYHISVAEEGNDKWLSLDLEQC
IPFWPEDASNALLVQVERNQGPPKKIHFNKQENCILLRLDDELGGVIAEVNLAEHSTVIR
FSDYHDGAATFLLINHTKSDIVQYNQSSLSEIEDSLPPGKAVFYTWADPVGSRRLTWICG
KSHGVVTQKDDMMTPINLGKKTIYLVSFFEGLQRIILFTEDPRVFKATYESEKAELAEQE
IVLALQDVGISLVNNYTKQEVAYIGITSSDVVWETKPKKKARWKPMSIKHTEKLEKEFKE
YTESSPSEDKVIELDTNIPVRFTPSGTNMKILQPHVIAIRRNYLPALKVEYSTSAHQSSF
RIQIYRIQIQNQIHGAIFPFVFYPIKPPKSVTMDSAPKPFTDVSIVMRSAGHSQISRIKY
FKVLIQEMDLRLDLGFVYALAELMTEAEVTEKTEVELFHKDIESFQEEYKTASLVDSSQV
SLYEYFHISPIKLHLSVSLRSGREEAKDSEKQEGLMAVHSLNLLLKSIGATLTDVQDVVF
KLAFFQLNYQFHTASELQSEVIRHYSKQAIKQMYVLILGLEVLGNPFGLIREFSEGVEAF
FYEPYQGAIQGPEEFVEGMALGLKALVGGAVGGLAGAASKITNAMAKGVAAMTMDEDYQQ
KRREAMNKQPAGLREGITRGGKGLVSGFVSGITGIVTKPIKGAQKEGAAGFFKGVGKGLV
GAVARPTGGIIDMASSTFQGIKRATESSDEVESLRPPRFFNEDGVIRPYRLRDGTGNQML
QVMENGRFAKYKYFTHVMINKTDMLMITKSGVLFVTKGTFGQLTCEWQYSFDEFTKEPFI
VHGRRLRIEAKERVKSVFHAKEFGKIINFKTPEDARWILTKLEEAREPSPRF
NT seq
9519 nt
NT seq
+upstream
nt +downstream
nt
atggtgttcgagtcggtggtcgtggatgtgttgaaccggttcttgggggactatgtggtg
aacctggacacgtcccagctcactctgggcatctggggaggagctgtggccttgaagaat
cttgaaattaaagaaaatgctctgagtcaactggatgtaccatttaaagttaaagttggt
catataggtaatcttaatcttacaattccatggaaaaacctgtatactcaaccagttgaa
gctgtcctggaagacatttatttactcatagtgccttcttctcaaataaaatacgatcct
gtaaaagaagaaaaacaactcttggaggcaaagcaatatgaacttaagcgaatagaagaa
gcaaaacaaaaagtagctgatcaagaaaaacatcaggtggagaaaccggacactttcaca
gaaaaattaattactcagatcataaaaaatcttcaagtgaaaatttccaacatccatatt
cgttatgaagatgatatcacaaatcgagacaatccattgtcatttggtatttcccttcaa
aatctcagcatgcagacaactgatcaattctggattccatgtttacatgatgaaactgag
aaactctttcgtaagttaatccgattggataacctttttgcctattggaatgtgaagtct
cagttgttttaccttaatgattatgatgagtcattggacagcttgaggaatggtattgtc
aataaaaatattgttccagaaggttatgattttgtgtttcgccccatatctgctaatgcc
aaacttcagatgaatcggcgatcggattttgacttctctgcacccaagataaacctggaa
gttgagttacatgagatagcaattgaatttaataaaccacagtatttcagcattatggag
cttcttgagtcagttgatatgatgacgcaaaatctgccatataggaaattcaaacctgat
gtacctcttcactatcatgccagagaatggtggacttatgctatacatggtattctggaa
gtaaatgtctgcccccggttacggatgtggtcatggaagtatattagagaacacaggcaa
aaaatgaagcagtataaagaactgtataaaaaaaagataacaactaaaaagccaactggt
gaacttctcctctctttgcaggagttggaaaagatcttggatgtatttaatataactata
tcaagacaacaggcagaagttgaggtaaagaaagctggatacaggatttacagagaagga
gcaaaagattcggaggataataaaggatggtttagctggctgtggacttggtcagaacca
agaagtaaagaacagccagatgttaagcctggaattcttgaagaaatgttgacacctgaa
gaaaaagttttactctatgaagcaattggctacagtgaaacagcagttgatccaaccttg
cctaaaacatttgaagccatgaagttttttgttcacttgaaaagtatgtctattgttcta
agagaaaaacgagaaacacctgaactgttagatattgtagtggaagaatttagcactttg
atcgtgcaaagaccaggagcacaagcaattaaatttgaaaccaaaattgattcatttcat
gtcactggcttaccagacaactcaacaaaacctcacctcctttcttccttggatgatgct
acgtcactcttccaaattatatttgagataaatccgttagatgaaactgctgctcaaagg
tgtatcatagaagctgaacctttagaaatgatatatgatgcaagaacggtgaatagtata
gtggaatttttcagacctccaaaagaggtaaatctagcacagctcacttcagcaactttg
attaaacttgaagaatttcgtgacaagacagcaacaggtctactatatattattgaaaca
cagaaagttcttgatctcaaaattgatttgaaggcttcatacgttattatcccacaggat
ggaatttttagccctacgtcaaatttacttattttggatcttggtcatctaaaggtgaca
agcaaaagtcgtttggagttaccagatatgaaacaaggtggggccagacttgaagagata
atgcatagagcttatgattcctttgatgttcagcttacaagcatacagctgctttacagc
acagttggtgataattggaaagaagctcgaaaacttaatgtatctacacaacatattttg
atacctatgcacttcaatgtggaacttgctaaggccatggtttttatggatataaggatg
cccaaattcaagatatttggaaagttaccactgatttctttacgaatctcagataaaaaa
ctgcaagggattttggaattgatcgaaagcattccgaaacccacacctgcaactgaaaca
tatgcccctgtcaaaccatttcagattcaaaggtcgacttctttgggaacatcacagatt
tcacagaaagtgcttcctctcttggaacttccatgtgtcgaagatgattcagaggaagaa
ttttttgacgcactgtgtagtcccttggaagagcctcctcagtctcccactggagttaaa
agttgtcaacagaaaaagtttcaaaagccagattatacaaaaaatatgattcagtataaa
ataagatttgaagtgccagaggttttgattcagttttatcaccttgttggagattgtgaa
ctacctgtggtagaaattgatgttttaggactgggcacagatgttgagcttagaacattt
gatttgaaagcaaatgcctttttgaaagagttctgcttaaaatgcccagaatactttgat
gaaaacaagaaaccagtttatttgattacaacgctggataatacgatggaagatctgcta
acactggagtatgtgaaggcagaaaagaatctacctaatttgaaaagtacttacaacaat
gttgtgcaactaattaaggtgaatttttcctctttggatattcatttacatactgaagca
cttctgaatacaataaactattttaataacgtactcccacaactagaagaaaaacgagcc
tctgtgtctgttgcggagactgaagacaaaggagaggtcattaaaaaaatgtctttaaaa
ctacccaagaacgaagatattattaccttgcagattttggcagaattatcttgtttacag
atctttattcaagatcagaaacgtaacatttctgaaattaagattgaagggcttgattct
gagataataatgaggacttcagccactgaaataaatgcaaagctaaggaatataattgtc
ttggattctgataaaacagctttatacaaaaaggccgtttacatcactggaaaagaagtt
ttcagcttcaaaatggtctcttttgtggatgcaactgctggttctgcatacacagatatg
aacgtggttgatgttcaagttactttaactgttggttgcattgaagtagtttttgtcaca
aaatttctatgttctatattggcttttatagataattttcaagcggctaaacaagctttg
gctgaggctactgttcaggcagcaggaatggcggctactggtgtaaaagaactggcacag
aggagttctagaatgtcattggatgttaacatcaaagccccggtggtggtcatcccacag
tctccagtttctgaaaatgtttttgttgctgattttgggctaattacaatgacaaataca
ttccatataataacagagagccagagcaaccccccacccattattgatttgataacaata
aggctgagtgaaatgcgactatacaggtctcaatttattgatgatacgtaccaggaagta
ctggatctgctactgccattaaatcttgaggtgattgttgagcgaaatttatcttgggag
tggtaccaggaagttccttgttttaatgtaaatgctcagctaaagcccatggagttcatt
cttagtcaagaagatttaacaactatttttaagacattacatggcaatgtatggtatgaa
gaaggttatggtgcctcacctgcaggagtaaaagatgaacatagtattactagtggagct
agtaatgcttcacaccatttagaaggaacaactgtagtgacagctgctgtggtagaaata
cattcacaggcctctcaagttaagacaacgctaaatatgagtttcaaaactgattatctc
accatggtactatatagtccaagtcctgagcagacttcctttacagatgttcgtgatcct
gctctgaaacttgctgaatttaagttggagaatattataagcactgcaaagatgtataca
gatgactcagtattttcttccttctcattaaaaaactgtattttagatgataaaagacct
catgtcaagaaggcaactcctagaatgataggactgacagttgggtttgacaaaaaggac
atgatggatgtaaagtataggaaagtcagagatggtttggtgactgatttagtccttcaa
gaaatgtatatttgtgccagtgtagaatttctgctgacagttgcaaacgtctttcttgag
gccttcaccacaggcacggctatagaaaccagcgttcaaacatggactgctaaggaagaa
gtacctgtacaggaaaaagagaagtgggaagttaatattattattaaaaatcctgaaatt
gtgtttgtggctgatatgacacgaagtgatgctcctgccttagtcattacaacacaatgt
gaaatttgttggaaaggtgaccgtgagaacagtacaatgactgctgccattaaagatctt
caagtgagagcatgcccatttcttccagtcaagagaaaaggcagaatcactacggttttg
cagccctgtgacttattctatcaagctactcaaataagtgcaaatccacaagtgattgat
atatcagtaaaatccttgacactgaaggtttcaccagttatcataaatactgtgattacc
ataacgtcagcactttatacatctaaggaaaccatccctgaggatactgcttcttctaca
gcacatttatgggaaaagaaggatactaagagtttaaaaatgtggtttcttgaagaacca
aatgaagttgaaaacaaagctcccacaactgaattgattctcagaggagagatcataaga
gtgaacattgattctatttttatagttcttgaggctggagttggtcacagaacagtgcct
atgctgttagcaaagtcacgtttttcgggggaaggcaaaaactggagttccttgataaat
ctatactgtcagcttgaattagaagtccattattacaatgaaatgtttggtgtatgggag
cctttgcttgaacctttagaaattgatcagactgaggattttagaccatggaatcttgga
atcaagatgaaaaagaaagcaaaaatggctattgttgagtcagataccgaagaagaaaat
tacaaagtgccagaatataaaactgttatcagtttccattcaaaagaccaactaaatatt
acgttatccaaatgcggccttgtaatgttaaataatttagccaaggcatttacagaagcc
gccactggagcttcagctgtcatcatacgggatctagcgccatttatgattttaaattct
cttggacttccggtctctgtttcaccaagtgattcttttagtgtactcaatgttccattg
gcaagatcctatgtattgaaaaatgaagagagtttaagtatggattatgtgggaactaaa
gacaatgatcatttcaatgcaatgaccagcctaagcagtaaactcttctttattcttctt
acacccactaaccactctactgctgataagattcccttaacaaaagtgggacgacgacta
tacaccgtaagacacagagagtctggggttgaaaggtctattgtttgtcaagtcgatgga
gtggaaggaagtaagaaggtaacaattcgttctccagtgcagattaaaaatcatttttca
attccactttctgtttatgaaggggacacttcattgggaacagcttcacctggaagtgaa
ttcaacataccattaacatcttaccgatcacctctttctctgaagccagaagatgaggac
tatgaagtgtgtgaaagaattgactttgaagaaattataaaaaatgaaggcactcttcta
aagaagatatgtagatctacaaacgctgctaagaaaccatttattattaatgttgtccca
gaaaaagataatttggcatctctctctgtgtattcagaagatggttgggacttaccatac
ataatgcatttgtggccgcctatcctcctccgaaatcttcttccttacaaaattgcttat
tatatagaggggattgaacacagagtttatactctaaatgaaggacagtcagcccatatt
tgtactgcgcagttggataaagccagactacatttaaaattacttgactatcttaatcat
gattggaaaagtgaatattgtataaaacctaatcaacaagatattagtttcatcaatttc
acctgtgttacagaaatagaaaagactgatttagatattgctatccatgtaacttacaat
attggccagaccgttgtggcatttcatagtccttattggatggtcaataaaactggtcga
atgttacagtataaagcagatggaattcatcgaaagcatccacctaattacaaaaaaccc
attcttttttcttttcaaccaaagcatttttttaataacaataaggttcagcttatggta
actgatagtgaattgtcagatcagttttcaattgatactgttgggagtcatggagctgtt
aaatgtaaaggcctgaaaatggagtatcaagttggtgtcactatagacctcagcagtttt
aacattaccagaattgtgacttttacccctctttatatgattgaaaacaaaagcaaatac
catatatcagtggctgaagagggaaatgataaatggctctctcttgatttagagcagtgt
attcccttttggcctgaggatgcttctaatgcactgcttgttcaagttgaaagaaatcaa
ggccctcccaaaaagatacattttaacaagcaagaaaattgtattttattgcgtctggat
gatgagcttggaggtgttatagcagaggttaatttggctgaacattctacagttattaga
ttttcagattatcatgatggagcagctacattcctgttaataaatcacaccaagagtgac
attgttcagtacaaccaaagttctctcagtgaaatagaagattccctccctcctggaaaa
gcagtattttatacatgggctgatccagtgggctctagaaggctgacgtggatatgtgga
aaaagccacggtgtagtaacacaaaaggatgatatgatgacacctataaatttggggaaa
aagaccatttatttagtttcattctttgaaggcttacagcgcattattttattcactgaa
gatccaagggtatttaaagcaacatatgaaagtgagaaagcagagttagcggagcaagaa
attgtgttggccttacaagatgttggaatttccctcgtcaacaattacacaaagcaagaa
gtagcctatattggcattacaagttctgatgtggtttgggagacaaagcccaagaagaag
gcaagatggaagccaatgagtataaagcacactgagaagttagaaaaagaatttaaggaa
tatactgaatcttcaccttcagaagataaggttattgagttggacactaacattccggtt
cgcttcacacctagtggcactaacatgaaaattctgcaaccacatgtaatagccatacga
agaaattatcttccagcattaaaagtagaatatagcacatctgcacatcagtcatcattt
agaattcaaatttacagaatacagatccaaaaccagatacatggtgctatatttcctttt
gtgttttatccgattaaacctcccaagtcggtcaccatggattcagctccaaaacccttc
acagatgtcagtattgttatgagatctgcaggccattcccagatttcacgtattaagtac
ttcaaggtgttgatccaagaaatggatctcaggttagatcttgggtttgtctatgcttta
gcagaacttatgacagaagcagaagtgactgaaaaaacagaggttgaactttttcataaa
gatatagaatctttccaagaagaatataaaacagcttcattagtagattcatcacaagtc
agtctctatgaatactttcatatatctcccatcaagttgcacttaagtgtttcactgcgt
tcgggtagagaagaagctaaagattcagaaaaacaggaaggactgatggcggttcattcc
ttaaatcttctgctgaagagtattggtgcgactcttacagatgtacaagatgtagttttt
aagcttgcattttttcaactcaactatcagttccatacagcatctgaactacaatctgaa
gtaataagacactattcaaaacaggccattaagcaaatgtacgtactcattcttgggctt
gaagttttgggaaatccctttggcttgattagagaattttctgaaggtgtggaagcattt
ttttatgaaccttaccagggagccatccagggtcctgaagagtttgtggagggcatggcc
ctaggactgaaggcactagttggtggagctgtcggtggattagctggtgctgcctctaaa
atcaccaatgctatggcgaaaggggtggcagctatgactatggatgaagactaccaacag
aagagaagagaagccatgaataagcaaccagcgggtcttagagaaggcatcactcgtgga
ggaaaaggcttagtttctggtttcgtaagtggcataacaggaattgttacaaaaccaatc
aaaggagctcaaaaagaaggagcagctggtttcttcaaaggtgttgggaaaggtttagtt
ggagcagtggcaaggccaactggaggcatcatagacatggctagcagtacatttcaggga
ataaaaagagctacagagagttctgatgaagtggagagcctgcgaccccctcgattcttc
aatgaggatggagttatcagaccttacaggttgagggatgggactggcaaccaaatgtta
caggtcatggaaaatggaagatttgcaaaatataagtattttacccatgtcatgatcaac
aaaacagatatgttaatgataactaaaagcggtgtcttgtttgtaacaaaaggaacattt
ggacagcttacatgtgagtggcagtatagttttgatgagtttaccaaagagcccttcatt
gttcatgggagaagattacgcattgaagcaaaggaacgagtgaagtctgtatttcatgcc
aaagagtttgggaaaataattaacttcaagaccccagaagatgctaggtggatcctcacg
aaactagaagaagcaagagaaccttccccgagattctga
DBGET
integrated database retrieval system
