Prionailurus bengalensis (leopard cat): 122475883
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Entry
122475883 CDS
T07574
Symbol
SMG5
Name
(RefSeq) protein SMG5 isoform X1
KO
K11125
protein SMG5
Organism
pbg
Prionailurus bengalensis (leopard cat)
Pathway
pbg03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
pbg00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
122475883 (SMG5)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pbg03019
]
122475883 (SMG5)
03032 DNA replication proteins [BR:
pbg03032
]
122475883 (SMG5)
Messenger RNA biogenesis [BR:
pbg03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Other surveillance factors
122475883 (SMG5)
mRNA cycle factors
Common to processing body (P body) and stress granule
122475883 (SMG5)
DNA replication proteins [BR:
pbg03032
]
Eukaryotic type
DNA Replication Termination Factors
Telomerase complex (animals)
122475883 (SMG5)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EST1_DNA_bind
PIN_4
EST1
Motif
Other DBs
NCBI-GeneID:
122475883
NCBI-ProteinID:
XP_043423953
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All DBs
Position
E4:67208789..67234130
Genome browser
AA seq
1030 aa
AA seq
DB search
MSQGPPPGESSEPEAKVLHTKRLYRAVVEAVHRLDLILCNKTAYQEVFKPENISLRNKLR
ELCVKLMFLHPVDYGRKAEELLWRKVYYEVIQLIKTNKKDTSGSRDWLLPAPASLHPVPL
PAGASVLHRLDPRHRPPHRMQEASVCLREGDGLGTDGVPPMSHVPGGFVLSLQLHRVDSQ
TRGRFSETRHHGVFFLLSPAARYQNELAGVDTELLAERFYYQALSVAPQIGMPFNQLGTL
AGSKYYNVEAMYCYLRCIQSEVSFEGAYGNLKRLYDKAAKMYHQLKKCETRKLSPSRKRC
KDIKRLLVNFMYLQSLLQPRSSPVDAELTSLCQSVLEDFNLCLFYLPSSPNLSLASEGEE
DYEGGYAFLPDLLIFQMVIVCLMGVHSLKRAGSKQYSAAIAFTLALFSHLVNHVNIRLQA
ELEEGENPVPAFQSDGTDEPLEKEEAPGPEPPPAAPQAGEVRKSRKFSRLSCLRRRRHPP
RAGDDSDLSEGFESDSSRDSARASEGSDSGSDKSLEGGGTAFDAETDSEMNSQESRSDLE
DIEDEEGTRSPALEPPRPRSEAPESLNGPLGPSEASIASNLQAMSTQMFQTKRCFRLAPT
FSNLLLQPPAEAPTAASRRPCVNGDADKPSEPASEDGSESEGSESSGRSCRNERSVQEKL
QVLAAEGLLPAVKVFLDWLRANPELIVVCAQSSQSLWNRLSVLLNLLPAAGELQESGLAL
CPEVQDLLEGGELPDLPSSLLLPEDTALRNLPPLRAAHRRFNFDTDRPLLSALEESVVRI
CCIRSFGHFVARLQGSILQFSAEAGIFVSIAQSEQEGVLPQAQAQIRMAQEEARRNRLMR
DMAQLRLQLEVSQLEGSLQQPKAQSAMSPYLVPDTQALCHHLPVIRQLATSGRFIVIIPR
TVIDGLDLLKKEHPGARDGIRYLEAEFKKGNRYIRCQKEVGKSFERHKLKRQDADAWTLY
KILDSCKQLTLAQGAGEEDPSGMVTIVTGLPLDDPSALSGPMQAALQAAAHASVDIKNVL
DFYKQWKEIG
NT seq
3093 nt
NT seq
+upstream
nt +downstream
nt
atgagccaaggcccccccccaggggagagcagcgagcccgaggcgaaggtcctccacacc
aagcggctttaccgggctgtggtggaggccgtgcatcgacttgacctcatcctttgcaac
aaaaccgcttatcaagaagtgttcaaaccagagaacattagcctgaggaacaagctgcgt
gagctctgcgtcaagctcatgttcctgcacccggtggactatgggaggaaggctgaggag
ctgctgtggagaaaggtgtactatgaagttattcagcttatcaagactaacaaaaaggac
acatctggtagccgggattggcttctaccagcacctgcttctctacatccagtcccacta
ccagctggagcttcagtgctgcatcgactggacccacgtcaccgaccccctcataggatg
caagaagccagtgtctgcctcagggaaggagatggactgggcacagatggcgtgccaccg
atgtctcatgtacctgggggatttgtgctctcactacagctgcacagagtggactcccag
acgaggggacgtttttctgaaacgcggcatcacggagttttcttcctcctctctcctgca
gcacggtatcagaatgaattagctggcgtagacaccgagctgctagctgagagattttac
tatcaagccctgtcagtagccccccagattggaatgcccttcaaccagctgggcacgctc
gcgggcagcaagtactacaacgtggaagctatgtactgctacctccgctgcatccagtcg
gaggtgtcctttgagggggcctatgggaatctcaagcggttgtatgacaaggctgccaaa
atgtaccaccagctaaagaagtgtgagactcggaaactctcccccagcaggaagcgatgt
aaagacattaagaggttgctggtgaacttcatgtacctgcaaagcctcctgcagcccaga
agcagcccggtggacgcggagctcacatccctctgccagtcggtcctggaggacttcaac
ctgtgcctcttctacctgccctcctcacccaacctcagcctggccagcgagggcgaggag
gactacgagggtggctacgctttcctcccggaccttctcatcttccagatggtcatcgtc
tgtctcatgggtgtgcacagcttgaagagagcagggtccaagcagtacagcgcggccatc
gccttcaccctggccctcttctcccacctcgtcaatcacgtcaacatacggctacaggct
gagctggaggagggcgagaaccccgtgccggcgttccagagtgatggcacagatgagccc
ttggagaaggaggaggcgccgggccctgagccccctcccgcagcacctcaagctggcgag
gtcagaaagagccggaagttctcccgcctctcctgcctccgccgccgtcgccatccaccc
agagctggggacgacagtgacctgagtgaaggttttgagtcggactccagccgtgactcg
gccagggccagcgagggctcggacagcggctccgacaagagtctggaaggtgggggaacg
gcctttgatgcggagacagactcggaaatgaacagccaagagtcccgatcagacctggaa
gatattgaggatgaggaggggacgcggtccccagccctggagccccctcggcccaggtca
gaggctcccgagtcgctcaacggcccactgggccccagcgaggccagcatcgccagcaat
ctacaagccatgtccacccagatgttccagaccaagcgctgcttccgactggcccccacc
ttcagcaacctgctcctccagccccctgccgaagcccccaccgcggccagccgcaggccc
tgtgtcaacggagacgcagacaagccctcggagccagcctctgaggacggctccgagtcg
gagggcagcgagtccagcgggcgctcctgtcggaacgagcggagtgtccaggagaagctg
caggtgctggcggctgaaggcctgcttcctgcggtcaaggtcttcctggactggctgcgg
gccaacccggagctcatcgtcgtgtgcgcgcagagctctcagagcctgtggaatcgcctg
tctgtgttgctgaacctgttgccagctgccggtgaactccaggagtctggcctggccctg
tgtcccgaggtccaggaccttctcgaaggtggtgaactgcctgacctgccctctagcctg
ctgctcccagaggacacggcccttcgtaacctgcctcccctccgggccgcccatagacgc
tttaactttgacacagaccggcccctgctcagcgccttagaagagtcggtcgtgcgcatc
tgctgcatccgcagctttggccacttcgtcgcccgcctgcaaggcagcatcctgcagttc
agcgcagaggccggcatcttcgtcagcatcgcccagtctgagcaggagggcgtgttgcca
caggcccaggcccagatccgcatggctcaggaggaagcgcgtcggaacaggctgatgcgg
gacatggcccagctacgactccagctcgaggtctctcagctagaagggagcctgcagcag
cccaaggcccagtcggcgatgtctccctacctcgtccccgacacccaggccctctgccac
cacctcccggttatccgccagctggccaccagtggccgcttcattgtcatcatcccgagg
acagtgatcgacggcttggatttgctgaagaaggaacacccaggggcccgggatgggatc
cgatacctggaggcagagtttaaaaaaggaaacaggtatattcgctgccagaaagaggtg
ggaaagagcttcgagaggcacaagctgaagaggcaggatgcggatgcctggaccctctat
aagatcctggacagctgcaaacagctgaccctggcccagggggcaggtgaggaggatcca
agcggcatggtgaccattgtcacgggcctcccactggatgaccccagtgcgttgtcaggc
cctatgcaggcagccctgcaggccgctgcacacgccagtgtggacatcaagaatgttctg
gatttctacaagcagtggaaggagattggttga
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