Prionailurus bengalensis (leopard cat): 122476392
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Entry
122476392 CDS
T07574
Symbol
TNR
Name
(RefSeq) tenascin-R
KO
K06252
tenascin
Organism
pbg
Prionailurus bengalensis (leopard cat)
Pathway
pbg04151
PI3K-Akt signaling pathway
pbg04510
Focal adhesion
pbg04512
ECM-receptor interaction
pbg05165
Human papillomavirus infection
pbg05206
MicroRNAs in cancer
Brite
KEGG Orthology (KO) [BR:
pbg00001
]
09130 Environmental Information Processing
09132 Signal transduction
04151 PI3K-Akt signaling pathway
122476392 (TNR)
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
122476392 (TNR)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
122476392 (TNR)
09160 Human Diseases
09161 Cancer: overview
05206 MicroRNAs in cancer
122476392 (TNR)
09172 Infectious disease: viral
05165 Human papillomavirus infection
122476392 (TNR)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
pbg00536
]
122476392 (TNR)
Glycosaminoglycan binding proteins [BR:
pbg00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
122476392 (TNR)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
fn3
Fibrinogen_C
EGF_TEN
EGF_Teneurin
EGF_Tenascin
Ig_DSCAM-DSCAML_C
EGF_2
Pur_ac_phosph_N
FN3_Tor_3rd
Motif
Other DBs
NCBI-GeneID:
122476392
NCBI-ProteinID:
XP_043424943
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All DBs
Position
E4:complement(17042486..17453171)
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AA seq
1358 aa
AA seq
DB search
MGVDGETVVLKNMLIGVNLILLGSLLKPSECQLEVTTERVQRQAVEEEGGVASYNASGKE
RPVVFNHVYNINVPLDSLCSSGLEASAEQEVSAEDEALTEYTGQTSDHESQVTFTHRINL
PKKACPCAGSARVLQELLSRIEMLEREVSVLRDQCNSNCCPESAATGQLDYIPHCSGHGN
FSLQSCGCICNEGWFGKNCSEPYCPLDCSSRGVCVDGQCICDSEYSGGDCSELRCPTDCS
SRGLCVDGECVCEEPYMGKDCSELRCPGDCSGKGICTNGTCFCQEGYVGEDCSQQRCLNA
CSGRGHCQEGLCFCEEGYQGPDCSAVAPPEDLRVAGISDRSIELEWDGPMAVTEYVISYQ
PTALGGLQLQRRVPGDWSGVTITELEPGLTYNISVYAVISNILSLPITAKVATHLSTPQG
LHFKTITETTVEVQWEPFSFSFDGWEISFIPKNNEGGVIAQLPSDVTSFNQTGLKPGEEY
IVNVVALKEQARSPPTSASVSTVIDGPTQILVRDVSDTVAFVEWTPPRAKVDFILLKYGL
VGGEGGKTTFRLQPPLSQYSVQALRPGSRYEVWVSAVRGTNESQSTTTQFTTEIDAPKNL
RVGSHTATSLDLEWDNSEAEVQEYKVVYSTLAGEQYHEMLVPKSIGPTTRATLTDLVPGT
EYGVGISAVMNSQQSVPATMNARTELDSPRDLMVTASSETSISLIWTKANGPIDHYRITF
TPSSGIASEVTVPKDRTSYTLTDLEPGAEYIISITAERGRQQSFESTVDAFTGFRPISHL
HFSHVTSSSVNITWSDPSPPADRLILNYSPRDEEEEMTEISLEATKRHTVLMGLQPATEY
IVNLVAVHGTVTSEPIVGSITTGIDPPKDITVSNVTKDSVMVSWSPPVASFDYYRVSYRP
TQVGRLDSSVVPNTVTEFTITKLYPATEYEISLNSVRGREESERVCTLIHTAMDNPVDLI
ATNITPTEALLQWKAPVGEVENYVIVLTHFAVAGETILVDGGSEGFQLVGLLPSTHYTVT
MYATSGPLTSGTISTNFSTLLDPPANLTASEVTRQSALISWQPPRAEIENYILTYKSTDG
SRKELIVDAEDTWIRLEGLSESTDYTVLLQAAQDTARSSLTSTTFITGGRVFPHPQDCAQ
HLMNGDTLSGVYTIFLNGELSRKLQVYCDMTTDGGGWIVFQRRQNGQTDFFRKWAEYRVG
FGNLEDEFWLGLDNIHRITSQGRYELRVDMRDGQEAAFAYYDKFSVEDGRNLYKLRLGVY
NGTAGDSLSYHQGRPFSTEDRDNDVAVTNCAMSYKGAWWYKNCHRTNLNGKYGESRHSQG
INWYHWKGHELSIPFVEMKMRPYSHRLTAGRKRRSLQF
NT seq
4077 nt
NT seq
+upstream
nt +downstream
nt
atgggggtagacggggaaacagtggtcctgaagaacatgctcatcggggtcaacctgatc
cttctgggctccctgctcaagccttccgagtgtcagctggaggtcaccaccgagagggtc
cagagacaggcggtggaggaggaaggaggtgttgccagttacaacgcctccggcaaagag
cggccggtggtcttcaaccacgtgtacaacatcaacgtgcccctggacagcctctgctcc
tcggggctggaggcctcggccgagcaggaggtgagtgccgaagacgaggcattgacagag
tacacgggccagacctcagaccatgagagccaggtcaccttcacccacaggatcaacctc
cccaaaaaggcctgcccgtgcgccggctccgcccgggtgctgcaggagctgctgagccgg
atcgagatgctggaaagggaggtgtcggtgctgcgggaccagtgcaacagcaactgctgc
ccggaaagcgcggccacaggacaactggactatatccctcactgcagcggccatggcaac
ttcagcctccagtcctgcggctgcatctgcaatgaaggctggttcggcaagaactgctct
gaaccgtactgccccctggactgctccagccggggcgtgtgtgtggatggccagtgcatc
tgtgacagcgagtacagcgggggcgactgctcagagctccggtgcccaacggactgcagc
tcccgggggctctgcgtggacggggagtgtgtctgcgaagagccttacatgggcaaggac
tgcagcgagctgaggtgccccggggactgttcggggaaggggatatgcaccaatggcacc
tgtttctgccaggagggctacgtgggtgaggactgcagccagcagcggtgtctgaacgcc
tgcagtgggcgaggacactgccaggaggggctctgcttctgtgaagagggctaccagggc
cctgactgctcggcagttgcccctccagaggacttgcgagtggctggtatcagcgacagg
tccattgagctggaatgggacgggccgatggcagtgacggaatatgtgatctcttaccag
ccgacggccctggggggcctccagctccagcggcgggtacctggagattggagtggtgtc
accatcacggagctggagccaggtctcacctacaacatcagcgtctacgctgtcattagc
aacatcctcagccttcccatcactgccaaggtggccacccatctctctacccctcaaggg
ctacacttcaagacgatcacggagaccactgtagaggtgcaatgggagcccttctcattc
tccttcgatggatgggagatcagcttcattccaaagaataatgaaggaggggtgattgca
cagctccccagtgatgtaacatccttcaatcagacaggactaaagccgggggaggaatac
attgtcaatgtggtggctctgaaagagcaagcccggagcccccctacctcggccagcgtc
tctaccgtcattgatgggccaacacagatcctggttcgagatgtctcggacaccgtggcc
ttcgtggagtggaccccacctcgagccaaagtcgacttcatcctcttgaagtatggcttg
gtgggcggggaaggcgggaagaccactttccggctccagcccccactgagccaatactca
gtgcaggccctgcggcccggctcccgctatgaggtgtgggtcagtgccgtccgtgggacc
aacgagagccagtccacgaccacccagttcacaacagagattgacgcccccaagaacctg
cgggttggctcccacacggccaccagccttgatctggagtgggacaacagtgaagcagag
gtccaggagtacaaggtcgtgtacagcaccctcgcgggtgagcagtaccacgagatgctg
gtccccaagagtatcggtccaaccaccagagccaccctcacagatttggtgcctggcacg
gagtatggagttggaatatccgctgtcatgaattcacagcaaagtgtaccagccaccatg
aatgccaggactgaactcgatagtccccgagacctcatggtgacagcctcctcggaaacc
tccatctccctcatctggaccaaggccaacggccccattgaccactaccgaattaccttt
accccgtcctccgggattgcctcagaagtcactgtgcccaaggacagaacctcatacaca
ctgacagatctagagcctggggcagagtacatcatttcaatcactgctgagaggggtcgg
cagcaaagcttcgaatccaccgtggatgccttcacaggcttccgccccatctcccatttg
cacttttctcacgtgacctcctccagcgtaaacataacctggagtgacccatcccctcca
gcagacagactcattctgaactacagccctcgggatgaagaggaagagatgacagagatc
tccctggaagctaccaagaggcacactgtcctgatgggtctgcagccagccaccgagtac
atcgtgaacctggtggcagtccatggcacagtgacctctgaacccattgtgggctccatc
accacaggaattgatccccccaaagacatcacagttagcaatgtgaccaaggactcagtt
atggtctcctggagccctcctgttgcatcatttgattactaccgagtatcgtatcggcca
acacaagtgggacggctggacagctcagtggtgcccaacacggtgacagaattcaccatc
accaagttgtatccagccactgaatatgaaataagtctcaacagtgtgcggggcagagag
gagagtgagcgcgtctgcaccctcattcacacagccatggacaaccctgtggatctgatc
gccaccaacatcactccaacagaagccctactgcagtggaaggcaccagtgggtgaagtg
gagaactatgtcattgttctcacacactttgcagttgctggagagaccatcctggttgac
ggaggcagtgagggattccagctcgttggcctgcttcccagcacccactatactgtcact
atgtatgccaccagtggacctctcaccagtggtaccatcagcaccaacttctctaccctc
ctggaccctcctgcaaacctgacggccagtgaagtcaccagacaaagtgccctgatctcc
tggcagcctcccagagcagagattgaaaactacatcttaacctacaaatccactgatgga
agccgcaaggagctgattgtggacgcagaggacacgtggatccgactggagggcctttct
gagagcacagactacacggtgctcctgcaggcggcccaggacactgcccggagcagcctc
acctccaccaccttcatcacagggggccgggtgtttcctcatcctcaagactgtgcccag
catttgatgaatggagacactctgagtggggtttacaccatcttcctcaatggagagcta
agccggaagttacaggtgtactgcgatatgaccaccgatgggggtggctggattgtattc
cagagacggcagaatggccaaaccgattttttccggaaatgggctgagtaccgtgttggc
ttcgggaacctggaggatgagttttggctggggctggataacatacacaggatcacatcc
cagggccgctacgagctgcgtgtggacatgcgtgacggccaggaggccgccttcgcctac
tatgacaagttctctgtggaggatggcagaaacctgtacaaactgcgcctgggagtctac
aatggcaccgcaggggactccctcagctatcatcagggacgccctttctccacagaggac
agagacaatgatgttgcagttaccaactgcgccatgtcatacaagggggcctggtggtac
aagaactgccaccggaccaacctcaatgggaaatatggagagtccaggcacagtcagggg
atcaactggtaccattggaagggccacgagctctccatcccttttgtggaaatgaagatg
cgcccttacagccaccgtctcacggcggggaggaaacggcggtccttgcagttctga
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integrated database retrieval system
