Prionailurus bengalensis (leopard cat): 122476943
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Entry
122476943 CDS
T07574
Name
(RefSeq) LOW QUALITY PROTEIN: probable ATP-dependent RNA helicase DDX46
KO
K12811
ATP-dependent RNA helicase DDX46/PRP5 [EC:
5.6.2.7
]
Organism
pbg
Prionailurus bengalensis (leopard cat)
Pathway
pbg03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
pbg00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
122476943
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
pbg03041
]
122476943
Enzymes [BR:
pbg01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
122476943
Spliceosome [BR:
pbg03041
]
Complex A
U2 snRNP components
U2 related factors
122476943
Complex B
122476943
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
KH_12
KH-I_KHDC4-BBP
FAM176
Motif
Other DBs
NCBI-GeneID:
122476943
NCBI-ProteinID:
XP_043425803
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All DBs
Position
X:complement(59809115..59813010)
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AA seq
1039 aa
AA seq
DB search
MGRESCHYRKWSASRGRSXSSRSRSRSRSSRSRSRSPDRRSKRGDDRRSRSRDRDRRRER
SPSRDKRRSRSRDWKRLRHSRSRERDRSRERRRSRSRDRRCSRSRSRGRRSRSSSPGNKR
KKAENRSRSKEKTNSGESSKEKKKDXDDKEDEKEKDAGNFDQNKLEEEMRKRKERVEKWR
EEQRKKAMENIGELKKEIEEMKQGKKWSLEDGDDDEDDPAEAEKEGNEMEGEELDPLDAY
MEEVKEEVKKFNMRSVKGGGGNXKKSGPTVTKVVTVVTTKKAVVDSDKKKGELMENDQDA
MEYSSEEEEVDLQTALTGYQTKQRKLLEPVDHGKIEYEPFRKNFYVEVPELAKMSQEEVN
VFRLEMEGITVKGKGCPKPIKSWVQCGISMKILNSLKKHGYEKPTPIQSQAIPAIMSGQD
LIGIAKTGSGKTIAFLLPMFRHIMDQRSLEEREGPIAVIMTPTRELALQITKEREKFSKT
LGLRVVCVYGGTGISEQIAELKRGAEIIVCTPGRMIDMLAANSGRVTNLGRVTYVVLDLA
DRMFDMGFEPQVMRIVDNVHPDQQTVMFSATFPRAMEALARRILSKPIEVQVGGRSVVYS
DVEQVIVIEEEKKFLKLLELLGHYQELGSVIIFVDKQEHADGLLKDLMRASYPCMSLHGG
IDQYDRDSIINNFKNGTCKLLIATSVAARGLDVKHLLLVNYSCPNHYEDYVHRAGRTGRA
GNKGYAYTFITEDQAHYAGDIIKALELSGTAVSSDLEKLWSDFKDQQKSEGKIIKKSSGF
SGKGFKFDETEQALANERKKLQKAALGLQDSDDEDAAIDIDEQIESMFNSKKRVKDMAAP
GASSVPAPTVGNAEKLEIAKRLALRINAQKNLGIESQVDVMQQATNAILRGGTILAPTVS
AKTIAEQLAEKINAKLNYVPLEKQEEERQDGGQNESFKRYEEELEISDFPQTARWKVTSK
EALQRISEYYEAAITIRGTYFPPGKEPKEGEWKIYLAIESANELAVQKAKAEITRLIKEE
LIRLQSSYQPTNKGRYKVL
NT seq
3118 nt
NT seq
+upstream
nt +downstream
nt
atgggccgggaatcatgccattatcggaagtggtcagcatcaagggggcgctcttgatct
agtcgatctagatctagatctagatctagtcgatctagaagtcgctcacctgacagaaga
agtaaacgtggagatgacaggcggtccagaagcagagatagagatagaaggagagagagg
tctcctagcagggataaaagaagatctcggtcaagagactggaagcgcctgaggcattcc
agaagtagagagagagatcgaagtcgagagcgaagaagatctcgaagtcgagacaggaga
tgctccaggagtagaagccgaggccggcgatccagatcctcaagtcctggcaataaaagg
aagaaagctgagaataggtctaggtccaaagagaaaacaaatagtggggaaagttctaaa
gagaagaaaaaagacagatgacaaggaggatgaaaaagaaaaagatgctggtaactttga
tcagaataagctggaagaagaaatgaggaagcgaaaagaacgagtagaaaaatggcgaga
ggagcaacgtaaaaaggccatggaaaacattggggaactgaaaaaggaaatagaagagat
gaaacaagggaaaaaatggagtttagaagatggtgatgatgatgaagatgatcctgcaga
agctgaaaaggaaggaaatgaaatggagggtgaggagttagatccattagatgcttacat
ggaagaagtgaaagaggaagtaaaaaagtttaatatgcgaagtgtgaagggtggtggagg
gaattaaaagaagtctgggccaacagtcacaaaagttgtcactgtagtgacaaccaaaaa
agcagtggtagattctgataagaagaaaggtgagctaatggagaatgaccaggatgccat
ggagtattcttcagaggaggaagaagttgatcttcagacggcccttacaggctaccagac
aaaacagagaaagcttctagaaccagtggatcatggaaaaattgaatatgaaccattcag
aaaaaacttttatgttgaagttccagaattagcaaaaatgtctcaagaggaggtaaatgt
ttttcggttggaaatggaaggcattactgtcaagggaaaaggttgccccaaaccaattaa
atcttgggtccagtgtggaatttccatgaagatcctaaattctctcaaaaagcatggcta
tgaaaaacccacgccaatccagtcccaggcgattcctgctataatgtctggacaagattt
gattggtattgccaagacaggaagcggaaagaccattgcttttctgttgcccatgtttag
acacatcatggatcagaggtcattagaagaaagagaggggccaatagctgtcatcatgac
tccaactcgagaactggctttacaaattactaaagaacgtgagaagttttcaaagaccct
gggacttagagtggtctgtgtttatggaggaacaggaatcagtgagcagattgctgagct
gaaaagaggtgctgaaattattgtttgcacacctggtcgaatgattgacatgttagcagc
taatagtggtcgggtcacaaatcttggaagagtaacatatgttgttttagacctagcaga
cagaatgtttgacatgggttttgaaccacaggtcatgcgcattgtggataatgtccatcc
tgaccaacagacagttatgttttcagctactttccccagagctatggaggctttggctcg
cagaatcctcagtaaacccattgaagtgcaggttggaggcagaagcgtggtttactcaga
tgtggaacaagtgattgtgattgaagaagaaaagaagttcttgaagttacttgagcttct
cggccattatcaagagttgggatctgtcattatatttgtggataagcaggaacatgcaga
tggtcttctgaaagatttaatgagagcatcttatccttgcatgtctcttcatggaggcat
tgatcaatatgacagagatagcatcataaataacttcaagaatgggacctgcaaacttct
catagccacttctgttgctgcccgaggtttagatgtgaaacatctgcttcttgtaaatta
cagctgccccaaccattatgaggattatgtgcacagagcgggacggactggaagagcagg
caataaaggttatgcgtatacttttatcacagaagatcaagctcactatgctggtgacat
aattaaagctcttgaattgtcaggaactgcagtgtcttctgatctggagaaactttggag
tgatttcaaagatcagcagaaatctgaagggaaaataattaaaaagagtagtgggttctc
tggtaagggattcaaatttgatgaaacagaacaagctttggctaatgagaggaagaagtt
gcaaaaagcagctctcggtttgcaagattcagatgatgaggatgctgcaatcgacattga
tgaacaaattgaaagtatgtttaattcaaagaagagagtaaaagatatggctgctcctgg
agcatctagtgttcctgctccaactgtgggaaatgctgagaaattagaaatagctaagag
actggctcttagaatcaatgctcagaagaatttgggtattgagtctcaggtagatgtgat
gcaacaggccaccaatgcaattctcagaggcggcaccatcctggctcccactgtgtctgc
aaaaaccattgcagagcaacttgctgaaaagatcaatgctaagctcaattatgtgccttt
ggagaaacaagaagaggagaggcaagatggtggacagaatgaatcttttaaaagatatga
agaagaattagagatcagtgacttcccacagactgctaggtggaaagttacctctaagga
agctctgcagagaatcagtgaatattatgaagctgcaattacaatcagaggaacatattt
cccacctggcaaagaacctaaggaaggagagtggaaaatttacttggcaattgaaagtgc
caatgaactggctgtgcagaaagcaaaggcagaaatcaccagacttataaaagaagaact
gatccggctgcaaagttcataccaaccaacaaataaaggaagatacaaagtcttataa
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