Prionailurus bengalensis (leopard cat): 122477586
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Entry
122477586 CDS
T07574
Symbol
COL25A1
Name
(RefSeq) collagen alpha-1(XXV) chain isoform X1
KO
K24356
collagen type XXV alpha
Organism
pbg
Prionailurus bengalensis (leopard cat)
Pathway
pbg04974
Protein digestion and absorption
Brite
KEGG Orthology (KO) [BR:
pbg00001
]
09150 Organismal Systems
09154 Digestive system
04974 Protein digestion and absorption
122477586 (COL25A1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
pbg00536
]
122477586 (COL25A1)
Glycosaminoglycan binding proteins [BR:
pbg00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
122477586 (COL25A1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Collagen
Motif
Other DBs
NCBI-GeneID:
122477586
NCBI-ProteinID:
XP_043426661
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All DBs
Position
B1:114395003..114864376
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AA seq
693 aa
AA seq
DB search
MLVKKHAGKGGGREPGSEDPRQRCAWTVPPCTSLAALLSVVALMSCLYLGVKTNDLQARI
AALESAKGDPSIHLLPDRLDQLKAVVQEKVEQLLAQRSYEHMAKIRIAREAPSECNCPAG
PPGKRGKRGRRGESGPPGQPGPQGPPGPKGDKGEQGDQGPRMVFPKINHGFLSADQQLIK
RRLIKGDQGQAGPPGPPGPPGPRGPPGDTGKDGPRGMPGVPGEPGKPGEQGLMGPLGPPG
QKGSVGMPGIPGVNGQKGEPGLPGTVGQNGIPGPKGEPGDRGEKGDAGESGPKGDTGEKG
DPGSSAAGIKGEPGESGRPGQKGEPGLPGLPGLPGIKGEPGFIGPQGEPGLPGLPGTKGE
RGEAGPPGRGERGEPGAPGPKGKQGESGTRGPKGSKGDRGEKGDSGALGPRGPPGQKGDQ
GATEIIDYNGNLHEALQRITTLTVTGPPGPPGPQGLQGPKGEPGSPGVPGVDGEQGLKGS
KGDMGDPGMPGEKGGIGLPGLPGANGMKGEKGDSGLPGPQGPSIIGPPGPPGPHGPPGPM
GPHGLPGPKGEPGLNGVKGLKGEPGQKGDRGPLGLPGASGLDGKPGSRGTDGPMGPHGPA
GPKGERGEKGAMGEPGPRGPYGLPGKDGEPGLDGFPGPRGEKGDVGEKGEKGEKGKKGKK
GPKGEKGEQGAPGLDAPCPLGPDGLPMPGCWQK
NT seq
2082 nt
NT seq
+upstream
nt +downstream
nt
atgctggtgaagaagcatgcggggaaaggtgggggccgggagccaggctccgaggacccg
aggcagcgttgtgcctggaccgtgccgccgtgcacctccctggcggcccttctctcagtg
gtggccctgatgtcttgtctgtaccttggggtgaaaaccaacgacctccaggcgaggatc
gctgctctcgaatccgcaaaaggggacccttccattcatctgctccctgatcgcctggat
cagctcaaagcagtggtgcaagagaaagtggagcaacttctggctcagagatcctatgaa
catatggctaaaataagaatcgcaagagaagcaccttcagagtgcaactgcccagcaggc
cctccggggaaacgaggtaagaggggccgaagaggagaatctggtcctcctggccaacct
ggtcctcagggccctcctggtccaaaaggtgataagggagaacaaggtgaccagggacct
cggatggtgtttcctaaaatcaatcatgggtttctctctgctgatcagcagctcattaaa
cgccgcctcattaagggtgaccaagggcaggctgggcctccaggacctccaggccctccc
ggcccaagaggacctcctggggacacagggaaagatggccctcgtggaatgccaggagtg
cctggtgaaccagggaaaccaggagaacaaggcttgatgggtcctctggggcctccagga
caaaagggttctgttggaatgcctggaattccaggggtgaatggtcaaaagggtgagcct
gggttgcctggaacagtaggacaaaacggaataccagggccaaagggagaacctggagat
cgaggagaaaagggagatgctggagagagtggccccaaaggtgacacaggcgaaaagggt
gaccctggatcatctgcggcaggaattaagggggaacctggagaatctggtcgtccaggg
caaaagggtgaaccagggcttcctgggcttcctggacttccggggataaagggagaacca
ggtttcattggtcctcaaggagaaccaggtttaccagggttaccaggaacaaagggtgaa
cgtggggaggcagggcctcctggaagaggtgagcgaggggagcctggagcccctggacca
aaggggaaacaaggtgaatcaggaactagaggcccaaaggggtcaaagggtgatcgtgga
gagaaaggggactctggagccctgggaccaaggggtccacctggtcaaaagggagatcaa
ggagccactgagatcatagactacaatggcaacctccacgaagccttgcagaggattacc
accttaactgtcacgggtccccctggaccacctggacctcaaggactacaagggccaaag
ggagagccaggatctccaggagtcccaggagttgatggagagcagggacttaaaggctca
aagggagacatgggggacccaggtatgccaggtgaaaaaggaggaatcggacttcctgga
ttaccgggtgccaatggaatgaaaggagaaaaaggagactctggattaccaggtcctcag
ggtccttccatcataggcccaccaggcccaccaggcccccatggcccaccaggccccatg
ggacctcatggacttcctggaccaaagggtgaaccagggttaaatggtgttaaaggattg
aagggtgaaccaggtcaaaagggtgacagaggaccccttggtcttccaggagcatctggc
ttagacgggaagccaggatcccggggtacagatggccctatgggaccccatggccctgca
ggtcccaaaggagaaagaggtgaaaaaggagctatgggagagcctggacccagaggaccc
tatggtctgcctgggaaagatggagagcctggtcttgatggcttccctggtccacgaggc
gagaagggtgatgtaggagaaaagggagaaaagggggaaaagggaaagaaaggcaaaaag
gggcctaaaggggagaaaggagaacagggtgctcctggattagatgcaccttgcccgttg
gggccagatggattacctatgcctggctgttggcaaaagtga
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