Prionailurus bengalensis (leopard cat): 122479852
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Entry
122479852 CDS
T07574
Symbol
CHD5
Name
(RefSeq) chromodomain-helicase-DNA-binding protein 5 isoform X1
KO
K14435
chromodomain-helicase-DNA-binding protein 5 [EC:5.6.2.-]
Organism
pbg
Prionailurus bengalensis (leopard cat)
Brite
KEGG Orthology (KO) [BR:
pbg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
pbg03036
]
122479852 (CHD5)
Chromosome and associated proteins [BR:
pbg03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
122479852 (CHD5)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
CHDCT2
CHDII_SANT-like
Helicase_C
CHDNT
PHD
DUF1087
Chromo
PHD-1st_NSD
HDA2-3
ResIII
PHDvar_NSD
HTH_CHD1_Hrp3
DEAD
PHD_2
AAA_22
Motif
Other DBs
NCBI-GeneID:
122479852
NCBI-ProteinID:
XP_043429563
LinkDB
All DBs
Position
C1:complement(3939519..4002644)
Genome browser
AA seq
1948 aa
AA seq
DB search
MRGPLGTEEELPRLFADEMENEDEMSEEEDGLGGFDDCFPEEPVGLPKKKKSKKPKENRS
KGKRKKKEGSNDELTENEEDLEEKSESEGSDYSPNKKKKKKLKDKKEKKAKRKRKDDDED
DNDDGCLKEPKSSGQLMAEWGLDDVEYLFSEADYHTLTNYKAFSQFLRPLIAKKNPKIPM
SKMMTVLGAKWREFSANNPFKGSSAAAAAAAVAAAVETVTIAPPLSVSPQQAPQPVPIRK
AKTKEGKGPGVRKKIKASKDSKKKGKGRKVAGLKFRFGGISNKRKKGSSSEEDEREESDF
DSASIHSSSVRSEGSAALGKKSKRRRKKRRIDDGDGYETDHQDYCEVCQQGGEIILCDTC
PRAYHLVCLDPELEKAPEGKWSCPHCEKEGIQWEPKDDEDDEEEGGCEEEEDDHMEFCRV
CKDGGELLCCDACPSSYHLHCLNPPLPEIPNGEWLCPRCTCPPLKGKVQRILHWRWTEPP
APFMVGLPGPDVEPGVPPPKPLEGIPEREFFVKWAGLSYWHCSWVKELQQLELYHTVMYR
NYQRKNDMDEPPPFDYGSGDEDGKSEKRKNKDPLYAKMEERFYRYGIKPEWMMIHRILNH
SFDKKGDVHYLIKWKDLPYDQCTWEIDDIDIPYYDNLKQAYWGHRELMLGEDARLPKRLV
KKGKKPKEDKQKPPDTPIVDPTVKFDKQPWYIDSTGGTLHPYQLEGLNWLRFSWAQGTDT
ILADEMGLGKTVQTIVFLYSLYKEGHSKGPYLVSAPLSTIINWEREFEMWAPDFYVVTYT
GDKESRSVIRENEFSFEDNAIRSGKKVFRMKKEVQIKFHVLLTSYELITIDQAILGSIEW
ACLVVDEAHRLKNNQSKFFRVLNSYKIDYKLLLTGTPLQNNLEELFHLLNFLTPERFNNL
EGFLEEFADISKEDQIKKLHDLLGPHMLRRLKADVFKNMPAKTELIVRVELSQMQKKYYK
FILTRNFEALNSKGGGNQVSLLNIMMDLKKCCNHPYLFPVAAVEAPVLPNGSYDGSSLVK
SSGKLMLLQKMLKKLRDEGHRVLIFSQMTKMLDLLEDFLEYEGYKYERIDGGITGGLRQE
AIDRFNAPGAQQFCFLLSTRAGGLGINLATADTVIIYDSDWNPHNDIQAFSRAHRIGQNK
KVMIYRFVTRASVEERITQVAKRKMMLTHLVVRPGLGSKSGSMTKQELDDILKFGTEELF
KDDVEGMMSQGQRPVTPIPDVQSSKGGALAASAKKKHGSTPPGDNKDVEDSSVIHYDDAA
ISKLLDRNQDATDDTELQNMNEYLSSFKVAQYVVREEDGVEEVEREIIKQEENVDPDYWE
KLLRHHYEQQQEDLARNLGKGKRIRKQVNYNDASQEDQEWQDELSDNQSEYSIGSEDEDE
DFEERPEGQSGRRQSRRQLKSDRDKPLPPLLARVGGNIEVLGFNARQRKAFLNAIMRWGM
PPQDAFNSHWLVRDLRGKSEKEFRAYVSLFMRHLCEPGADGAETFADGVPREGLSRQHVL
TRIGVMSLVRKKVQEFEHVNGKYSTPDLIPEGPEGKKPSEVISSDPNTPVPASPAHLLPA
PLGLPDKMEAQLGYMDEKELGVQKPKKPPEIQALPTALDRVEGEDKHENSDGQERLEDTE
KAPPSPEQPPKEEVLPEKEKILDKLELSLIHSRGDGNDFRPDDTKVEEKEPIETQQNGDK
EEDEEGKKEDKNGKFKFMFNIADGGFTELHTLWQNEERAAVSSGKIYDIWHRRHDYWLLA
GIVTHGYARWQDIQNDPRYMILNEPFKSEIHKGNYLEMKNKFLARRFKLLEQALVIEEQL
RRAAYLNMTQDPNHPAMALNARLAEVECLAESHQHLSKESLAGNKPANAVLHKVLNQLEE
LLSDMKADVTRLPSMLSRIPPVAARLQMSERSILSRLTNRAGDPTTQQGAFGNSQMYNNN
FGPNFRGPGPGGIVNYNQMPLGPYVTDI
NT seq
5847 nt
NT seq
+upstream
nt +downstream
nt
atgcggggcccgctgggcaccgaggaggagctgccgcggctgttcgcggacgagatggag
aacgaggacgagatgtcagaagaagaagatggtcttgggggcttcgatgactgcttccct
gaggagcctgtgggccttcccaagaagaagaaatccaagaagcccaaggagaacaggtct
aaagggaaacggaagaagaaggaggggagcaatgacgagctgacggaaaatgaagaagat
ctggaagagaagtcggagagtgagggcagtgactactcccctaataagaagaagaaaaag
aaactcaaggacaagaaggagaaaaaagccaagcgaaagaggaaagatgatgacgaggat
gataacgatgatgggtgcctgaaggagcccaagtcctcggggcagctcatggccgagtgg
ggcctggacgatgtggagtacctgttctcagaggccgactaccacacactgaccaactac
aaggccttcagtcagttcctcaggccgctcattgccaagaagaacccgaagatccccatg
tccaaaatgatgaccgtcctgggtgccaagtggcgggaattcagcgccaacaaccctttc
aagggcagctcggcagcggctgcagcggcagcagtggccgcggccgtggagacagtcacc
atcgcccctccgctgtctgtcagcccccagcaggcaccccagcctgtacctatccgcaag
gccaagaccaaggagggcaaggggccaggagtgaggaagaagatcaaagcctccaaggac
tcgaagaaaaagggcaaagggagaaaggtagccgggctcaagttccgctttggagggatc
agcaacaagaggaagaagggctcctcgagcgaggaagatgagcgggaggagtcggacttc
gacagcgccagcatccacagctcctccgtgcgctccgagggctcggcagccctggggaag
aaaagcaagaggcggcgcaagaagaggaggattgacgatggtgatggctatgagacggac
caccaggactactgtgaggtgtgccagcagggcggggagatcatcctgtgcgacacctgc
ccgcgggcctaccacctagtctgcctcgacccagagctggagaaggctccggagggcaag
tggagctgtcctcactgtgaaaaggaggggatccagtgggagccgaaggacgacgaggac
gacgaggaggagggcggctgcgaggaggaggaggacgaccacatggagttctgccgcgtg
tgcaaagacggcggcgaactgctctgctgcgacgcctgcccgtcctcctaccacctgcat
tgcctcaacccgccgctgcccgagatcccaaacggtgaatggctctgcccgcgctgtact
tgtcccccactgaagggcaaagtccagcggatcctgcactggaggtggacggagcccccg
gctcccttcatggtggggctgccggggcccgacgtggagcccggtgtccccccaccgaag
cccctggagggcattccggagagggagttctttgtcaagtgggctggactctcctactgg
cactgctcctgggtgaaagagttacagcagctggagctgtaccacacggtgatgtatcgc
aactaccaaagaaagaacgacatggatgagccgccgccctttgactacggctctggcgac
gaggacggcaaaagcgagaagaggaagaacaaggaccccctctatgccaagatggaggag
cgcttctaccgctacggcatcaagcccgagtggatgatgatccaccgtatcctgaaccac
agcttcgacaagaagggggacgtgcactacctgatcaagtggaaagacctgccctatgac
caatgcacctgggagatcgacgacatcgacatcccctactacgacaacctgaagcaggcc
tattggggtcacagggagctgatgctgggtgaggatgccaggctgcccaagaggctggtc
aagaagggcaagaagccaaaggaggataaacagaagccgccagacacacccatcgtggat
cccacggtcaagtttgacaagcagccttggtacattgactccacgggtggcacactgcac
ccgtaccagctggagggcctcaactggctgcgcttctcctgggcccagggcacggacacc
atcctggccgacgagatgggcctgggcaagactgtgcagaccatcgtcttcctctactcc
ctgtacaaggaggggcactccaaggggccctacctggtcagcgcgcccctgtccaccatc
atcaactgggagcgggagtttgagatgtgggcgcccgacttctatgtggtcacctacacg
ggggacaaggagagccgctccgtgatccgggagaacgagttttctttcgaggacaacgcc
attcggagcggaaagaaggtgttccgcatgaagaaagaagtgcagatcaaattccacgtc
ctgctcacctcctacgagctcatcaccatcgaccaggccatcctgggctccatcgagtgg
gcctgccttgtggtggacgaggcccaccggctcaagaacaaccagtccaagttcttcaga
gtcttgaacagctacaagatcgattacaagctgctgctgacggggaccccgcttcagaac
aacctggaggagcttttccacctcctcaacttcctgactccagagaggttcaacaatctg
gagggcttcctggaggagtttgctgatatctccaaggaagaccagatcaaaaagctccat
gacctgctggggccgcacatgctgaggcggctcaaggccgatgtgttcaagaacatgccg
gccaagaccgagctgatcgttcgcgtggagctgagccagatgcagaagaagtactacaag
ttcatcctcacgcggaacttcgaggcactgaactccaaggggggcgggaaccaggtgtcg
ctgctcaacatcatgatggacctgaagaagtgttgcaaccacccctacctcttccccgtg
gctgccgtggaggcccccgtcttgcccaatggctcctatgacggcagctccctggtcaag
tcctcgggcaagctcatgctgctacagaagatgctcaagaaactgagggatgaagggcac
cgcgtgctcattttctcccagatgacgaagatgttggaccttctggaggacttcctggag
tatgagggctacaagtatgagcggattgatggtggcatcactgggggcctccgacaagag
gcgatcgacagattcaacgcccccggggcccagcagttctgcttcctcctctcgacccgg
gcgggtggcctgggcatcaacctggctacagcagacacggtcatcatctacgactcggac
tggaatccacacaatgacatccaggccttcagccgcgcccaccgcatcggacagaacaag
aaggtaatgatctaccgctttgtgactcgggcctcggtggaggagcgcatcacgcaggtg
gccaagcgcaagatgatgctcacccacctggtggtgcggcctggcctcggttccaagtct
ggctccatgaccaagcaggagctggacgacatcctcaagttcggcaccgaggagctcttc
aaggacgacgtggagggcatgatgtctcagggccagaggcctgtcacgcccatcccggat
gtccagtcctctaaagggggagccctggctgccagcgccaagaaaaagcatggcagtacc
ccgccaggcgacaacaaggacgtggaggacagcagtgtgatccactatgacgatgcggcc
atctccaagctgctggacagaaaccaggacgccacggacgacacggagctgcagaacatg
aacgaatacctgagctccttcaaggtggcgcagtacgtggtgcgcgaggaggatggcgtg
gaggaggtggagcgggagatcatcaagcaggaggagaacgtggaccccgactactgggag
aagctgcttcggcaccactacgagcagcagcaggaggacctggcccgcaatctgggcaag
ggcaagcgcatccgcaagcaggtcaactacaacgacgcctcccaggaggaccaggagtgg
caggacgagctctcggataaccagtctgaatattccatcggctccgaggacgaggatgag
gactttgaggaaaggccagaagggcagagtggacggcgacaatccaggaggcagctgaaa
agcgacagggacaagcccctgccacctcttctcgcccgtgtgggtggcaatatcgaggtg
ctgggcttcaacgcccggcagcggaaggcctttctgaacgccatcatgcgctggggcatg
cccccccaggacgccttcaactcccactggctggtgcgggaccttcgagggaagagcgag
aaggagtttagagcctatgtgtccctcttcatgcggcacctgtgtgagccgggggctgac
ggtgcagagaccttcgcggacggcgtgccccgtgagggcctctcgaggcagcacgtgctt
acccgcatcggggtcatgtcactggttaggaagaaggttcaggagtttgaacacgttaac
gggaagtacagcaccccggacttgatccccgaggggcccgagggcaagaagccaagcgaa
gtcatctcctcggaccccaacacgccagtgcccgccagccctgcccacctcctgccggcc
ccactgggcctgccagacaaaatggaagcccagctgggctacatggatgagaaggagctg
ggggtgcagaagccaaagaagcccccagaaatccaggccctgccaactgccctggacaga
gtggagggcgaggacaagcatgagaactcagatggccaggagcgactggaggacacagag
aaggccccgccgtccccagagcagccgccaaaagaagaagtgcttcctgagaaggagaaa
attctggacaagctggagctaagcttgattcacagcagaggggatggcaacgatttcagg
ccagatgacaccaaagtggaggagaaggagcccattgaaacacagcaaaatggtgacaaa
gaggaagatgaggaggggaagaaggaggacaagaatgggaagttcaaattcatgttcaac
attgcagatgggggcttcacagagctgcacacgttgtggcagaatgaggaacgtgccgct
gtgtcctcggggaaaatctacgacatctggcaccggcgtcatgactactggctgctggcg
ggcatcgtgacgcacggctacgcccgctggcaggacatccagaatgacccgaggtacatg
atcctcaacgagcccttcaagtctgagatccacaagggcaactatctggagatgaagaac
aagttcctggcccgcaggttcaagctgctggagcaggccctggtcatcgaggagcagctc
cggagggccgcgtaccttaacatgacccaggaccccaaccacccagccatggccctcaac
gcccgcctggccgaggtggagtgccttgctgagagccaccagcacctgtccaaggagtcc
cttgccgggaacaagccagccaatgctgtcctgcacaaggtcctgaaccagctggaggag
ctgctgagtgatatgaaggcggatgtgacgcgcctgccctccatgctgtcgcgcatcccc
cccgtggctgcccgtctccagatgtcagagcgcagcatcctgagccgcctgaccaaccga
gctggtgaccccaccactcagcagggcgctttcggcaactcccagatgtacaacaacaac
tttgggcccaacttccggggccctggaccgggagggattgtcaactacaaccagatgccc
ctggggccctatgtgaccgatatctag
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integrated database retrieval system
