Prionailurus bengalensis (leopard cat): 122480403
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Entry
122480403 CDS
T07574
Symbol
IFT88
Name
(RefSeq) intraflagellar transport protein 88 homolog isoform X1
KO
K16474
intraflagellar transport protein 88
Organism
pbg
Prionailurus bengalensis (leopard cat)
Brite
KEGG Orthology (KO) [BR:
pbg00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
pbg03037
]
122480403 (IFT88)
Cilium and associated proteins [BR:
pbg03037
]
Primary cilia and associated proteins
Intraflagellar transport (IFT) complex B1
122480403 (IFT88)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_1
TPR_2
TPR_12
TPR_8
TPR_7
TPR_19
TPR_6
TPR_14
TPR_16
TPR_11
ANAPC3
TPR_17
TPR_10
TPR_CcmH_CycH
ARM_TT21_4th
ARM_TT21_5th
TPR-S
TPR_21
ARM_TT21_N
ARM_TT21_C
DUF6584
RPN7
TPR_15
HEAT_Nup120
HAT_PRP39_C
ARM_TT21_2nd
Motif
Other DBs
NCBI-GeneID:
122480403
NCBI-ProteinID:
XP_043430690
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Position
A1:1597933..1731088
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AA seq
825 aa
AA seq
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MMQNVHLAPETDEDDLYSGYNDYNPTYDTEELENDTAFQEAVRTSHGRRPPITAKIPSTA
VTRPVATGYGSKTSLASSMGRPMTGAIQDGVTRPMTAVRAAGFTKAAVRGSAFDPLGQSR
GPAPPLEAKNEDSPEEKIRQLEKKVNELVEESCIANSCGDLKLALEKAKDAGRKERILVR
QREQVTTPENINLDLTYSVLFNLASQYSANEMYAEALNTYQVIVKNKMFSNAGRLKVNMG
NIYLKQRNYSKAIKFYRMALDQIPSVHKEMRIKIMQNIGVTFIKTGQYSDAINSFEHIMS
LAPNLKAGFNLILSYFAVGDRDKMKKAFQKLIAVPLEIDEDDKYISPSDDPHTNLVIEAI
KNDHLRQMERERKAMAEKYIMTAAKLIAPVIETSFAVGYDWCVEVVKASQYVELANDLEI
NKAITYLRQKDFNQAVETLKMFEKKESRVKSAAATNLSFLYYLENEFAQASSYADLAVNS
DRYNPSALTNKGNTVFANGDYEKAAEFYKEALRNDSSCTEALYNIGLTYKRLNRLDEALD
CFLKLHAILRNSAQVLYQIANVYELMEDPNQAIEWLMQLISVVPTDSRALSKLGELYDSE
GDKSQAFQYYYESYRYFPSNIEVIEWLGAYYIDTQFCEKAIQYFERASLIQPSQVKWQLM
VASCFRRSGNYQKALDTYKDIHRKFPENVECLRFLVRLCTDIGLKEVQEYATKLKRLEKM
KEIREQRVRSGRDGGGGSRSRREGSAGSDSGQSCSASSKGERLSAKLRALPGTNEPYESS
SNKEIDASYVDPLGPQIERPKTAARKRIDEDDFADEELGDDLLPE
NT seq
2478 nt
NT seq
+upstream
nt +downstream
nt
atgatgcaaaatgtacacctggccccagagacagatgaagatgatctttattctggttat
aatgactacaatccaacctatgacactgaggaattagagaacgacacagcttttcaggaa
gccgtgagaactagtcatggcagaagacctccaataactgctaaaataccaagcacagca
gttactagacctgtagctactggatatgggtccaagacatccctggcatcatcgatggga
agaccaatgacaggggctattcaggatggagttactagaccaatgacagcagtgagagca
gctggttttaccaaagcagctgtaagaggctctgcatttgacccccttggtcagtcaagg
ggccctgctcctcctttggaagccaaaaatgaagatagtccagaagaaaagattagacaa
ttagagaagaaagtaaatgaattggtagaagaaagctgtattgccaacagttgtggagac
ttaaagttggccttagaaaaggcaaaagatgcaggaagaaaggagagaatcttggtgaga
caacgagaacaagttacaactccagaaaatatcaatttggatttaacttactcagttctt
ttcaacttggccagtcaatattcagcgaatgaaatgtatgctgaagcactaaatacatac
caagttatagtgaaaaataagatgtttagcaatgcaggaagattgaaagtgaatatggga
aatatttatttaaagcaaagaaattattccaaagccattaaattctaccgaatggcacta
gatcaaattccaagcgtccataaagaaatgaggattaaaatcatgcagaacattggtgtt
acatttattaaaactggtcaatattcagatgccattaattcatttgagcacataatgagt
ctggcaccaaatctgaaggcaggcttcaacctgattcttagttactttgctgttggagat
cgagacaaaatgaagaaggcgttccaaaaattgattgcggttccattagaaatcgatgaa
gatgataaatatatctcaccaagtgatgatccacatactaacttagtaatcgaagctata
aaaaatgatcatctaaggcaaatggaacgtgaacggaaagctatggcagaaaaatacatc
atgacagctgcaaaactcattgctcctgtaattgaaacatcttttgctgtaggttatgat
tggtgtgttgaagttgtgaaagcctctcagtatgtagagctagcaaatgatctggaaata
aacaaagcaattacatacttgagacaaaaggactttaaccaagctgtggagaccttaaaa
atgtttgaaaaaaaggagagtagagtgaaaagtgcagctgcaaccaacctctcatttctg
tattatttggaaaatgaatttgcacaagccagtagctatgcagatttagctgtgaactct
gataggtataatccctcagctctgactaacaaagggaatacagtttttgcaaacggtgat
tatgagaaggcagctgaattctacaaagaggctctaagaaatgattcttcttgtactgaa
gcactttataatattggccttacctataagaggctaaaccggcttgatgaagctttggac
tgtttcctgaaacttcatgcaatcctaagaaacagtgcccaagttctttaccagatagca
aatgtatatgaattaatggaagatcccaatcaagctattgaatggttaatgcaactgatc
agtgttgttccaactgattctagagctctgtctaaactaggagaattatatgatagtgaa
ggagataaatcccaagcatttcagtactactatgagtcatataggtatttcccctctaac
attgaagttattgagtggcttggagcttattacattgacacccagttttgtgaaaaagcc
attcaatactttgaaagagcttctcttatacagccttcacaagtgaaatggcagctgatg
gtggctagttgttttagaagaagtggtaactaccaaaaagcattggatacttacaaggat
attcacagaaaatttccagaaaatgttgaatgtctgcgcttcttggttcgtctctgcacg
gatattggattaaaagaagttcaagaatatgcaacaaaacttaagagattggaaaaaatg
aaagaaataagggaacagcgcgtaaggtctggcagagatggcggcgggggctcccgcagc
agaagagagggcagtgccggcagtgatagtggccagagctgtagtgccagtagtaaaggt
gaacgactaagtgccaaactcagagctttacctgggacaaatgaaccttatgaaagtagc
agtaacaaagaaatagatgcctcttatgtggatccactgggccctcaaatagaaaggcca
aaaactgcagcaagaaaaagaattgacgaggatgattttgctgatgaagagttaggagat
gatttgcttccagaataa
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