KEGG   Prionailurus bengalensis (leopard cat): 122481215
Entry
122481215         CDS       T07574                                 
Symbol
WDR33
Name
(RefSeq) pre-mRNA 3' end processing protein WDR33 isoform X1
  KO
K15542  polyadenylation factor subunit 2
Organism
pbg  Prionailurus bengalensis (leopard cat)
Pathway
pbg03015  mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:pbg00001]
 09120 Genetic Information Processing
  09122 Translation
   03015 mRNA surveillance pathway
    122481215 (WDR33)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:pbg03019]
    122481215 (WDR33)
Messenger RNA biogenesis [BR:pbg03019]
 Eukaryotic type
  mRNA processing factors
   3' end processing
    Cleavage and polyadenylation specificity factor (CPSF) complex
     122481215 (WDR33)
SSDB
Motif
Pfam: Beta-prop_WDR5 WD40 Beta-prop_THOC3 Beta-prop_WDR3_1st WD40_CDC20-Fz WD40_Prp19 WD40_WDHD1_1st Beta-prop_EML_2 Beta-prop_WDR3_2nd Beta-prop_EML Beta-prop_CAF1B_HIR1 WD40_Gbeta WDR55 EIF3I Beta-prop_IFT140_1st Beta-prop_WDR36-Utp21_2nd Beta-prop_Aladin Beta-prop_TEP1_2nd Beta-prop_WDR90_POC16_2nd WD40_MABP1-WDR62_2nd Beta-prop_WDR36-Utp21_1st ANAPC4_WD40 Beta-prop_RIG_2nd Beta-prop_WDR19_1st Beta-prop_EIPR1 Collagen WDR90_beta-prop_4th Beta-prop_WDR75_1st Beta-prop_Vps41 Beta-prop_IFT122_1st eIF2A WD40_RFWD3 Beta-prop_SCAP WD40_MABP1-WDR62_1st Beta-prop_WDR35_TULP_N Beta-prop_DCAF4 Beta-prop_HPS5 Beta-prop_WDR11_2nd Beta-prop_WDR41 Ge1_WD40 PEP5_VPS11_N
Other DBs
NCBI-GeneID: 122481215
NCBI-ProteinID: XP_043432381
LinkDB
Position
C1:111539552..111648757
AA seq 1330 aa
MATEIGSPPRFFHMPRFQHQAPRQLFYKRPDFAQQQAMQQLTFDGKRMRKAVNRKTIDYN
PSVIKYLENRIWQRDQRDMRAVQPDAGYYNDLVPPIGMLNNPMNAVTTKFVRTSTNKVKC
PVFVVRWTPEGRRLVTGASSGEFTLWNGLTFNFETILQAHDSPVRAMTWSHNDMWMLTAD
HGGYVKYWQSNMNNVKMFQAHKEAIREASFSPTDNKFATCSDDGTVRIWDFLRCHEERIL
RGHGADVKCVDWHPTKGLVVSGSKDSQQPIKFWDPKTGQSLATLHAHKNTVMEVKLNLNG
NWLLTASRDHLCKLFDIRNLKEELQVFRGHKKEATAVAWHPVHEGLFASGGSDGSLLFWH
VGVEKEVGGMEMAHEGMIWSLAWHPLGHILCSGSNDHTSKFWTRNRPGDKMRDRYNLNLL
PGMSEDGVEYDDLEPNSLAVIPGMGIPEQLKLAMEQEQMGKDESNEIEMTIPGLDWGMEE
VMQKDQKKVPQKKVPYAKPIPAQFQQAWMQNKVPIPAPNEVLNDRKEDIKLEEKKKTQAE
IEQEMATLQYTNPQLLEQLKIERLAQKQAEQIQPPPSSGTPLLGPQPFPGQGPMSQIPQG
FQQPHPSQQMPMNMAQMGPPGPQGQFRPPGPQGQMGPQGPPLHQGGGGPQGFMGPQGPQG
PPQGLPRPQDMHGPQGMQRHPGPHGPLGPQGPPGPQGNSGPQGHMGPQGPPGPQGHIGPQ
GPPGPQGHLGPQGPPGTQGMQGPPGPRGMQGPPHPHGIQGGPGSQGIQGPVSQGPLMGLN
PRGMQGPPGPRENQGPAPQGMMMGHPPQEMRGPHPPSGLLGHGPQEIRGMQGPPAQGSML
GPPQELRGPPGSQGQQGPPQGSLGPPPQGGMQGPPGPQGQQNPARGPHPSQGPIPFQQQK
TALLGDGPRAPFNQEGQNAGPPPLIPGLGQQGAQGRIPPLNPGQGPGPNKGDSRGPPNHH
MGPMSERRHEQSSGPEHGPERGPFRGGQDCRGPPDRRGPHPDFPDDFSRPDDFHPDKRFG
HRLREFEGRGGPLPQEEKWRRGGPGPPFPPDHREFSEGDGRGAARGLPGAWEGRRPGDER
FPRDPEDPRFRGRREESFRRGAPPRHEGRAPPRGRDGFPGPEDFGPEENFDPSDESARGR
DLRGRGRGTPRGGRKGLLPTPDEFPRFEGGRKPDSWDGNREPGPGHEHFRDAPRPDHPPH
DGHSPASRERSSSLQGMDMASLPPRKRPWHDGPGTSEHREMEAPGGPSEDRGGKGRGGPG
PSQRVPKSGRSSSLDGDHHDGYHRDEPFGGPPGSGTPSRGGRSSSNWGRGSNMNSGPPRR
GASRGGGRGR
NT seq 3993 nt   +upstreamnt  +downstreamnt
atggctacagaaattggttctcctcctcgttttttccatatgccaaggttccaacaccaa
gcacctcgacaactcttttataagcgacctgattttgcacagcagcaagcaatgcaacag
cttacttttgatggaaaacggatgagaaaagcagtaaaccgaaaaaccatagactataat
ccatctgtaattaagtatttggagaatagaatatggcaaagagaccagagagacatgcgg
gcagttcagcctgacgcaggttattataatgatctggtcccacctatagggatgttgaat
aatcctatgaatgcagtaacaacaaaatttgttcgaacatcaacaaataaagtaaagtgt
cccgtatttgttgttaggtggactccagaaggaagacgtttggtcactggagcttctagt
ggagagttcactttgtggaatggactcaccttcaattttgaaacaatattacaggctcat
gatagcccagtgagggccatgacttggtcacataatgacatgtggatgttgacagcagac
catggaggatatgtgaaatattggcagtcgaacatgaacaacgtcaagatgttccaggca
cataaggaggcgattagagaggccagtttctcacccacggataataaatttgctacatgc
tctgatgacggcactgttagaatctgggactttcttcgttgccatgaggaaagaattctc
cgagggcatggtgcagatgtgaaatgtgtagactggcatccaacaaaagggttagttgtt
tcaggaagtaaagatagtcaacaaccaatcaagttctgggatcccaagacggggcagagt
cttgcaacacttcacgcccataaaaacacagtaatggaagtgaaattaaatctcaatggc
aattggctgctcaccgcatcacgtgaccacctctgcaaactttttgatatccgaaacctg
aaggaagagcttcaagtcttccgaggtcacaagaaagaagccacagctgtggcctggcat
cctgttcacgaaggactgtttgccagtggcgggtccgatggctctttgttattctggcat
gtgggggtagagaaggaagtgggtgggatggagatggcccatgaaggaatgatctggagt
ctggcttggcatcctcttggacatattctctgctcaggttcaaatgaccatactagcaaa
ttttggacccgaaaccgaccaggtgataaaatgcgagatcgatataatctcaacctattg
cctggaatgtctgaagatggagtagaatatgatgaccttgaacctaatagcctggcagta
attccaggaatgggaataccagaacaactaaaactggctatggaacaggagcagatgggg
aaagatgagtcaaatgaaattgagatgacaattccaggtttggactggggaatggaggag
gtgatgcaaaaggatcagaaaaaagttcctcagaagaaagttccatatgcaaaacctatt
cctgctcagttccagcaggcgtggatgcaaaataaagttccaattcctgccccaaatgag
gtactgaatgacagaaaagaggacattaaattggaagagaagaagaaaacacaagcggaa
attgaacaagaaatggccacgttacagtatactaacccacagcttctggagcaacttaaa
attgaaagacttgcacagaaacaggctgagcaaattcagccgcctccttcatctggcact
cctctcctcggaccccagccctttccaggacaaggtccaatgtctcagattcctcaaggt
tttcaacaaccccatccatctcagcagatgccaatgaacatggctcaaatggggcctccg
gggccacagggacagtttagaccccctggaccccagggacaaatgggaccacaaggtcct
ccactgcatcagggaggtggggggccacaaggattcatgggaccacaagggccccagggc
ccaccccaggggttgccgaggcctcaggacatgcatgggccccaaggaatgcaaaggcat
cctggacctcatggccctttgggacctcaaggaccacctggaccacagggtaattctggt
cctcaaggtcatatgggacctcagggtccacctggcccacaaggtcacataggcccccaa
ggcccacctggtccccagggtcacttgggccctcaggggcctcctggtactcaaggtatg
cagggaccacctggtcccagaggaatgcaaggacctcctcaccctcatgggatccaaggt
gggccagggtctcaagggatccaaggtcctgtgtctcagggacctctgatgggattgaat
ccaagaggaatgcagggtcctccaggcccccgagagaaccagggtcctgctccccaaggg
atgatgatgggccacccacctcaagagatgagaggacctcaccctccaagtggactgctg
ggacacggccctcaggagatacgaggcatgcaggggcctccagcccaagggtccatgcta
ggccctccccaggaattgcgggggcctccaggctcacaaggtcagcaggggccgccccag
ggctctttggggcctccaccccagggtggcatgcaagggccccctggacctcagggacag
cagaacccggcaagagggccacatccgtctcaagggccaataccattccagcagcagaaa
acagctctgctaggtgatgggcctcgggcccccttcaatcaggaaggacagaacgcaggc
cccccacccctgataccaggcctagggcagcagggagcacaaggtcgcatcccccctctt
aaccctggacaaggacctggccctaacaaaggtgactcacgcggccctccaaaccaccac
atgggccccatgtcagagaggcggcatgagcagagcagcggccctgagcacgggcctgag
agggggcctttccggggcggccaggactgcaggggtccccctgataggcgtggccctcac
cccgacttccctgacgacttcagcagaccagatgacttccacccggacaaacgctttggc
caccgattacgtgaatttgaggggcgaggaggacctttaccacaagaagagaagtggagg
cgtgggggccccgggcctccgtttccgcctgatcacagggaattcagcgagggggatggc
cggggcgcagctcggggccttccgggggcttgggaaggccgcagacctggagatgaacga
ttcccccgggatcctgaggacccacgttttcgagggcgcagagaagaaagctttagaaga
ggagcacccccaagacatgaaggccgtgccccgccccgaggtagggatggctttcctggt
cctgaagactttggtccagaggagaattttgatccttctgatgaatcggcccgaggaaga
gatctccgaggtcgaggtcggggtaccccgcgaggaggaaggaagggtttgctccccact
cctgatgagttccctcgctttgaaggaggacggaaaccagactcctgggatggaaataga
gagccagggccaggtcatgaacatttccgtgatgctccgcgccctgatcatccccctcac
gacggtcattccccagctagcagagaacgttcctcttctctgcagggcatggacatggca
tccctgccaccccgaaagcgcccctggcacgacgggccggggacctcggagcacagagaa
atggaagccccggggggtccatctgaggatcgaggaggcaaaggccgagggggcccagga
ccttcccagagagtgccaaaatctgggcgctccagctccttggatggggatcaccacgac
ggctaccacagagatgaaccttttgggggccctccgggcagcggtactccttccagaggg
ggccgtagcagcagtaactggggtagagggagtaacatgaactctggcccgccacggcga
ggagcttcaaggggtggtggaaggggtcggtag

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