Prionailurus bengalensis (leopard cat): 122481343
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Entry
122481343 CDS
T07574
Symbol
PRPF40A
Name
(RefSeq) pre-mRNA-processing factor 40 homolog A isoform X1
KO
K12821
pre-mRNA-processing factor 40
Organism
pbg
Prionailurus bengalensis (leopard cat)
Pathway
pbg03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
pbg00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
122481343 (PRPF40A)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
pbg03041
]
122481343 (PRPF40A)
Spliceosome [BR:
pbg03041
]
Complex A
U1 snRNP components
U1 related factors
122481343 (PRPF40A)
Complex B
122481343 (PRPF40A)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FF
WW
WW_TCERG1
FF_RHG35_4th
WW_2
Motif
Other DBs
NCBI-GeneID:
122481343
NCBI-ProteinID:
XP_043432667
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All DBs
Position
C1:complement(143837318..143890866)
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AA seq
1040 aa
AA seq
DB search
MQATPSEAEAGGESPKSCVSTAHSDWTAGKPVSLLAPLIPPRSAGQPLTFGPSGRQPLRS
LLVGMCSGSGRRRSSLSPTMRPGTGAERGGLMVSEMENHPPSRGPGDGERRLSGSSLCSS
SWVSADGFLRRRPSMGHPGMHYAPMGMHPMGQRANMPPVPHGMMPQMMPPMGGPPMGQMP
GMMSSVMPGMMMSHMSQASMQPALPPGVNNMDVAAGTASGAKSMWTEHKSPDGRTYYYNT
ETKQSTWEKPDDLKTPAEQLLSKCPWKEYKSDSGKPYYYNSQTKESRWAKPKELEDLEGY
QNTIVAGSLITKSNLHAMIKAEETSKQEECTTTSTAPVPTTEIPTTMSTMAAAEAAAAVV
AAAAAAAAAAAAANASASTSASNTVGGTVPVVPEPEVTSIVATVVDNENTVTISTEEQAQ
LTSTPAVQDQSMEVSSNTGEETAKQEAVADFTPKKEEEESQPAKKTYTWNTKEEAKQAFK
ELLKEKRVPSNASWEQAMKMIINDPRYSALAKLSEKKQAFNAYKVQTEKEEKEEARSKYK
EAKESFQRFLENHEKMTSTTRYKKAEQMFGEMEVWNAISERDRLEIYEDVLFFLSKKEKE
QAKQLRKRNWEALKNILDNMANVTYSTTWSEAQQYLMDNPTFAEDEELQNMDKEDALICF
EEHIRALEKEEEEEKQKSLLRERRRQRKNRESFQIFLDELHEHGQLHSMSSWMELYPTIS
SDIRFTNMLGQPVFSLGSTALDLFKFYVEDLKARYHDEKKIIKDILKDKGFVVEVNTTFE
DFVAIISSTKRSTTLDAGNIKLAFNSLLEKAEAREREREKEEARKMKRKESAFKSMLKQA
TPPIELDAVWEDIRERFVKEPAFEDITLESERKRIFKDFMHVLEHECQHHHSKNKKHSKK
SKKHHRKRSRSRSGSDSDDDDSHSKKKRQRSESRSASEHSSSAESERSYKKSKKHKKKSK
KRRHKSDSPESDAERDKDKKEKDRESEKDRTRQRSESKHKSPKKKTGKDSGNWDTSGSEL
SEGELEKRRRTLLEQLDDDQ
NT seq
3123 nt
NT seq
+upstream
nt +downstream
nt
atgcaggcgacgccaagtgaggctgaggctgggggcgaatcgccgaagagctgcgtgtcg
acagcgcactctgattggacagcggggaagcctgtcagcttattggccccgctgatcccg
ccccgtagcgcagggcagcctttaacctttggccccagcgggcgccagccactcagatcg
cttcttgttggtatgtgtagcggcagtggccgccggcggagcagtctgagcccgacgatg
aggccggggacgggagctgagcgtggaggcctcatggtgagtgaaatggagaaccatcct
ccttcgcggggtcccggggacggggagcggagattgtccggctcaagcctctgctccagc
tcttgggtctctgctgacggcttcctgaggagacggccctcgatggggcaccctggcatg
cattatgccccaatgggaatgcaccctatgggtcagagagccaatatgcctcctgtacct
catggaatgatgccgcaaatgatgccccctatgggagggccgccaatgggacaaatgcct
ggaatgatgtcttcagtaatgcctggaatgatgatgtctcatatgtctcaagcttccatg
cagcctgccttaccgccaggagtaaataatatggatgtagcagctggtacagcgtctggt
gcaaaatcaatgtggaccgaacataaatcacctgatggaaggacttactactacaatact
gaaacaaaacagtctacttgggagaaaccggatgatctgaaaacacctgctgagcaactt
ttatctaaatgtccctggaaggaatacaaatctgactctggaaagccttactattataat
tctcaaacaaaagaatcccgctgggccaaacctaaagaacttgaggatcttgaaggatac
cagaataccattgttgctggaagtcttattacaaaatcaaacctgcatgcaatgatcaaa
gctgaagaaaccagtaagcaagaagagtgcaccacaacatcaacagccccagttcctaca
accgaaattccgaccacaatgagcaccatggctgccgcagaagctgcagccgctgttgtt
gcagccgcagcggcagctgctgccgctgctgctgcagccaatgccagtgcttccacctct
gcttctaatactgtgggtggaactgttccagttgttcctgagcctgaggttacttcgatt
gttgctactgttgtagataacgaaaatacagtaacaatttcaactgaagaacaagcacaa
cttactagtactcctgctgttcaggatcagagtatggaagtatccagtaatactggagaa
gaaacagctaagcaggaagcagtagctgattttactcccaaaaaagaagaggaggaaagc
caaccagcaaaaaagacctatacttggaatacaaaggaggaggcaaagcaagcatttaaa
gaattattaaaagaaaagcgagtaccatctaatgcttcatgggaacaagctatgaaaatg
atcattaatgatccacgatacagtgctttagcaaagttgagtgaaaaaaagcaggccttt
aatgcttacaaagtccaaacagagaaagaagaaaaagaagaagcaagatcgaaatacaaa
gaagctaaggaatcctttcagcgttttcttgaaaatcatgagaaaatgacttccacaacc
agatacaaaaaagcagagcaaatgtttggagagatggaagtctggaatgcaatatcagaa
cgtgatcgtcttgaaatctatgaagatgttttattctttctttcaaaaaaagaaaaggag
caagcaaagcaattacgaaagagaaattgggaagccttaaaaaacatacttgacaacatg
gctaatgtaacatactctactacgtggtctgaagcacagcagtatctgatggataatcca
acctttgcagaagatgaggaattgcagaacatggataaagaagatgcattaatttgcttt
gaagaacacatccgggctttagaaaaggaagaagaagaagaaaaacaaaagagtttgctg
agggaaaggagacgacagcgtaaaaatagagaatcttttcagatatttttagatgaacta
cacgaacatggacaactgcattctatgtcatcttggatggaattgtatccaacaattagt
tccgacatcagattcactaatatgcttggtcagccggttttttcattaggatcaactgca
cttgaccttttcaagttttatgttgaggatcttaaagcacgttatcatgatgagaagaag
atcataaaagacatcttaaaggataaaggatttgtagttgaagtgaatactacttttgaa
gacttcgtggccataatcagttcaactaaaagatcaaccacattagatgccggaaatatt
aagttggctttcaatagtttactagaaaaagcagaagcccgtgaacgtgaacgagaaaaa
gaggaggctcggaagatgaaacgaaaagaatctgcatttaagagtatgttgaaacaagct
actcctccaatagaattggatgctgtctgggaagatatccgggagagatttgtaaaagag
ccagcatttgaggatataactctagagtctgaaagaaaacgaatatttaaagattttatg
catgtgcttgagcatgaatgtcaacatcatcattcaaagaacaagaaacattctaaaaaa
tctaaaaaacatcacaggaaacgttcacgctctagatcggggtcagattcagatgatgat
gacagccactcaaagaaaaaaagacagcgatcagagtctcggtctgcttcagaacattct
tctagtgctgaatctgagagaagttataagaagtcaaaaaaacataagaagaaaagcaag
aagaggagacataaatctgactctccagagtctgatgctgagcgagacaaggataaaaaa
gaaaaagaccgagaaagtgaaaaagacagaactagacaaagatcagaatcaaaacacaaa
tcacctaagaaaaagactggaaaggattctgggaattgggatacttctggcagtgagctg
agtgaaggggaattggaaaagcgcagaaggacccttctggaacaactggatgatgatcaa
taa
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