Prionailurus bengalensis (leopard cat): 122481388
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Entry
122481388 CDS
T07574
Symbol
IFIH1
Name
(RefSeq) interferon-induced helicase C domain-containing protein 1
KO
K12647
interferon-induced helicase C domain-containing protein 1 [EC:
5.6.2.6
]
Organism
pbg
Prionailurus bengalensis (leopard cat)
Pathway
pbg04622
RIG-I-like receptor signaling pathway
pbg05161
Hepatitis B
pbg05162
Measles
pbg05164
Influenza A
pbg05168
Herpes simplex virus 1 infection
pbg05171
Coronavirus disease - COVID-19
Brite
KEGG Orthology (KO) [BR:
pbg00001
]
09150 Organismal Systems
09151 Immune system
04622 RIG-I-like receptor signaling pathway
122481388 (IFIH1)
09160 Human Diseases
09172 Infectious disease: viral
05161 Hepatitis B
122481388 (IFIH1)
05171 Coronavirus disease - COVID-19
122481388 (IFIH1)
05164 Influenza A
122481388 (IFIH1)
05162 Measles
122481388 (IFIH1)
05168 Herpes simplex virus 1 infection
122481388 (IFIH1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04054 Pattern recognition receptors [BR:
pbg04054
]
122481388 (IFIH1)
Enzymes [BR:
pbg01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
122481388 (IFIH1)
Pattern recognition receptors [BR:
pbg04054
]
Cytoplasmic pattern recognition receptors
RIG-I-like receptors
122481388 (IFIH1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CARD_2
RIG-I_C-RD
RIG-I_C
ResIII
DEAD
Helicase_C
CARD
SWI2_SNF2
Cas3-like_C_2
Sigma70_ner
DUF3638
NrS1-pol-like_tail
Arg_decarbox_C
Motif
Other DBs
NCBI-GeneID:
122481388
NCBI-ProteinID:
XP_043432840
LinkDB
All DBs
Position
C1:complement(152269328..152325988)
Genome browser
AA seq
1026 aa
AA seq
DB search
MSNGYCADRSFCYLLSCFRTRVKTYIQVEPVLDYLTFLPADLKEQIQRTAVTAGNIHAAE
LLLSTLEKGVWPPGWARQFVVALQRAGSVLAARYLNPELTDLPSPSSENAHDECLQLLNL
LQPSLVDRILVKDVLDKCVEEKLLTNEDRNRISAAESNGNESGVRELLKRIVQKENWFSA
FLTVLRQTENYALVEELTGTTCFGSNAGTESLSQEDGPEVKEGVLVATGQLSPDKEGRDT
ETHSLESSFADPCVTSESDTSLAEGSVSCLDESLGHNSNMGSDSGTMGSDSEEEHVAERA
SPEPELHLRPYQMEVAQPALEGKNIIICLPTGSGKTRVAVYIAKDHLDRKKKASEPGKVI
VLVNKVPLVEQLFRKEFEPFLKKWYHTIGLSGDTQLKISFPEVVKTYDVIISTAQILENS
LLNSEIGEDDGVQLSDFSLIVIDECHHTNKEAVYNNIMRRYLKQKLKNNKLKKECKPVIP
LPQILGLTASPGVGGAKRQAEAKEHILKICANLDACTIKTVKENLNQLKGQIKEPCKKFA
IADDTREDPFKDKLVEIMTRIQSFCEMSPMSDFGTQPYEQWTIQMEKKAAREGNRKDRVC
AEHLRKYNEALQINDTIRTIDAYNHLEAFYNDEKEKKFAVQEDDSDESGEEGNDDGNEDE
DDDKKPLRVDKTDRFLMDLFIENNRMLKKLAENPKHENEKLTKLRNTIMEQYTRTEESAR
GIIFTKTRQSAYALSQWITENKKFAEVGVKAHHLIGAGHSSEFKPMTQNEQKEVISKFRT
GKINLLIATTVAEEGLDIKECNIVIRYGLVTNEIAMVQARGRARADESTYVLVAHSGSGV
IEREIVNDFREKMMYKAIDHVQNMNPEEYAHKILELQMQSIMEKKMKIKRSITKYYKENP
SLINFLCKNCGVVACSGEDIHVIEKMHHVNMTPIFKELYIVRENKALRKKFVDYQTNGEI
ICKICGQAWGTMMVHKGLDFPCLKIKNFVVVFKNNSPKKQYKKWVELPITFPDLDYSEYC
LLSDED
NT seq
3081 nt
NT seq
+upstream
nt +downstream
nt
atgtcgaatggatattgcgcagacaggagtttctgctacctcctctcgtgtttcaggacc
agagtgaaaacgtacatccaggtggagcccgtactggactacctgacctttctccctgca
gacttgaaggagcagattcagaggacggccgtcaccgctgggaacatacacgcagcggaa
ctgcttctgagcaccttggagaagggagtctggcccccaggctgggctagacaatttgtg
gtggcccttcagagagcaggcagcgttttagccgcccgctacctgaacccagagctcacc
gacttgccctctccatcctctgagaacgctcatgatgagtgtctccagctgctgaacctc
cttcagccctccctggtggacagaattctggttaaagatgtcttggataagtgtgtggag
gagaaactgttgacaaacgaagacagaaatcggatttctgctgcagaaagcaatggaaat
gaatcaggtgtaagagagctactgaaaaggatcgtgcagaaagaaaactggttttctgca
tttctgactgttttgcgtcaaacagaaaactatgcccttgtcgaggagctaacaggcacc
acttgctttggaagcaatgcagggactgagagtttatcacaagaagatggccctgaagtt
aaagagggggttcttgtagccacgggtcagctgagtccagacaaagaaggtcgggacacg
gagactcactcactggaatcgtcttttgctgatccttgtgtaacttcagaatcagacaca
agtttggcagaaggaagtgtcagctgcttagatgaaagtcttggacataacagcaacatg
ggcagtgattcaggcaccatgggaagtgattcagaggaagaacatgtggcagaaagagca
tcccctgagccagaactgcatctcaggccctaccaaatggaagttgcccaaccagccttg
gaggggaaaaatatcattatatgcctccctacagggagtgggaaaaccagagtggccgtt
tacattgccaaggatcacttggacaggaagaaaaaagcatctgaacctggaaaagttata
gtccttgtcaataaggtaccactagttgaacagctcttccgcaaagagtttgaaccattt
ttgaagaaatggtatcatactattggattaagtggtgatacccaattgaaaatatcattt
ccagaagttgtcaaaacctatgatgttatcatcagtacagcccagatccttgaaaactcc
cttttaaactcagaaataggagaagatgatggtgtccagttgtcagacttttccctcatc
gttattgatgaatgccatcacaccaacaaagaagcagtctataataacatcatgaggcgt
tacttgaaacagaagttgaaaaacaataaactcaagaaagaatgcaaaccagtgattccc
ctacctcagatactaggactgacagcttcaccaggtgttggaggagccaaaaggcaagct
gaagccaaagaacatattttaaaaatatgtgccaatcttgatgcatgtaccattaaaact
gtgaaagaaaatctaaatcaactcaaaggccaaataaaagagccatgcaaaaagtttgca
atcgcagatgacaccagagaagatccatttaaagataaacttgtagaaataatgaccagg
attcaaagtttttgtgaaatgagtccaatgtcagattttggaactcaaccctatgaacaa
tggaccattcaaatggaaaaaaaagctgcaagagaaggaaatcgcaaagaccgagtttgc
gcagagcatttgaggaagtacaatgaggccctacaaattaatgatacaattcgaacgatc
gatgcttataatcacctggaagctttctataatgatgaaaaagaaaagaagtttgcagtc
caagaagatgatagcgatgagagtggtgaggagggtaacgatgatggtaacgaagatgag
gatgatgacaagaagcctttgagagtggataagacagatagatttctcatggatttattt
atagaaaacaatagaatgttgaaaaagctggctgaaaacccaaaacatgaaaatgagaag
ctgaccaaattaagaaacaccataatggaacaatacacaaggactgaggaatcagcccga
ggaataattttcacaaaaacacgacagagtgcatatgccctttcccagtggattactgaa
aataaaaaatttgctgaagttggcgtcaaagcccatcatctgattggagctggacacagc
agtgagttcaagcccatgacacagaatgaacaaaaagaagtcattagtaaattccgcact
ggaaaaataaatctgcttatcgctaccacagtggcagaagaaggtctggatattaaagaa
tgtaatattgttatccgttatggtctcgtcactaatgaaatagccatggtccaggcccga
ggtcgagccagagctgatgagagtacctacgtcctggttgcccacagtggttcaggagtt
attgaacgtgagatagttaatgatttccgagagaaaatgatgtataaagctatagaccat
gttcaaaatatgaacccagaggagtatgctcataagattttggaattacagatgcaaagt
ataatggaaaagaaaatgaaaatcaagagaagtatcacaaagtattacaaggaaaaccca
tcgttaataaatttcctctgcaaaaactgtggtgtggtagcctgctctggggaagacatc
catgtaattgagaagatgcaccatgtcaacatgacaccaatattcaaggaactctacatt
gtgagagaaaacaaagccctacgaaagaagtttgtagactatcaaacaaatggcgagatt
atctgcaaaatatgtggccaagcttggggaacgatgatggtgcacaaaggcttagatttt
ccttgtctcaaaataaagaattttgtagtggttttcaaaaataattcaccaaagaaacaa
tacaaaaagtgggtggaattaccgatcacgtttcctgatcttgactattcagaatattgt
ttgttaagtgatgaggactaa
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