Prionailurus bengalensis (leopard cat): 122481554
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Entry
122481554 CDS
T07574
Symbol
COL3A1
Name
(RefSeq) collagen alpha-1(III) chain isoform X1
KO
K19720
collagen type III alpha
Organism
pbg
Prionailurus bengalensis (leopard cat)
Pathway
pbg04611
Platelet activation
pbg04820
Cytoskeleton in muscle cells
pbg04926
Relaxin signaling pathway
pbg04933
AGE-RAGE signaling pathway in diabetic complications
pbg04974
Protein digestion and absorption
pbg05146
Amoebiasis
pbg05415
Diabetic cardiomyopathy
Brite
KEGG Orthology (KO) [BR:
pbg00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
122481554 (COL3A1)
09150 Organismal Systems
09151 Immune system
04611 Platelet activation
122481554 (COL3A1)
09152 Endocrine system
04926 Relaxin signaling pathway
122481554 (COL3A1)
09154 Digestive system
04974 Protein digestion and absorption
122481554 (COL3A1)
09160 Human Diseases
09174 Infectious disease: parasitic
05146 Amoebiasis
122481554 (COL3A1)
09166 Cardiovascular disease
05415 Diabetic cardiomyopathy
122481554 (COL3A1)
09167 Endocrine and metabolic disease
04933 AGE-RAGE signaling pathway in diabetic complications
122481554 (COL3A1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
pbg00536
]
122481554 (COL3A1)
Glycosaminoglycan binding proteins [BR:
pbg00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
122481554 (COL3A1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Collagen
COLFI
VWC
Motif
Other DBs
NCBI-GeneID:
122481554
NCBI-ProteinID:
XP_043433207
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Position
C1:176849829..176904419
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AA seq
1466 aa
AA seq
DB search
MTSFVQKGTWLLLALLHPTVILAQQQEAVDGGCSHLGQSYADRDVWKPEPCQICVCDSGS
VLCDDIICDEQELDCPNPEIPFGECCAVCPQPPTAPPRPPNGHGPQGPKGDPGPPGIPGR
NGDPGIPGQPGSPGSPGPPGICESCPTGPQNYSPQFESYDVKSGVVGPGIAGYPGPPGPP
GPPGPPGTSGHPGSPGSPGYQGPPGEPGQAGPAGPPGPSGAIGPSGPAGKDGESGRPGRP
GERGLPGPPGMKGPAGMPGFPGMKGHRGFDGRNGEKGETGAPGLKGENGLPGENGAPGPM
GPRGAPGERGRPGLPGAAGARGNDGARGSDGQPGPPGPPGTAGFPGSPGAKGEIGPAGSP
GSSGSPGQRGEPGPQGHAGAPGPPGPPGTNGSPGGKGEMGPAGIPGAPGLIGPRGPPGPS
GTNGAPGQRGAAGEPGKNGAKGEPGPRGERGEAGSPGIPGPKGEDGKDGSPGEPGANGLP
GAAGERGVPGFRGPAGANGLPGEKGPPGERGSPGPAGPRGAPGEPGRDGVPGGPGIRGMP
GSPGGPGSDGKPGPPGSQGESGRPGPPGPSGPRGQPGVMGFPGPKGNDGAPGKNGERGGP
GGPGPQGPAGKNGETGPQGPPGPTGPAGDKGDVGPPGPQGLQGLPGTSGPPGENGKPGEP
GPKGEAGSPGTPGGKGDSGAPGERGPPGALGPAGPRGGAGPPGPEGGKGPAGPPGPPGLA
GTPGLQGMPGERGGPGGPGPKGDKGEPGSSGTDGAPGKDGPRGPTGPIGPPGPAGQPGDK
GEGGAPGLPGIAGPRGGPGERGEHGPPGPAGFPGAPGQNGEPGAKGERGAPGEKGEGGPP
GVAGPPGGSGPAGPPGPQGVKGERGSPGGPGSAGFPGGRGPPGPPGNNGNPGPPGPTGAP
GKDGPPGPPGSSGAPGSPGVSGPKGDAGQPGEKGSPGAQGPPGAPGPLGIAGITGARGLA
GPPGIPGPRGSPGPQGVKGESGKPGSPGHNGERGAPGPQGLPGLAGAAGEPGRDGNPGSD
GLPGRDGAPGGKGDRGENGSPGPPGAPGHPGPPGPVGPAGKNGDRGETGPAGPSGAPGPA
GSRGAPGPQGPRGDKGETGERGSNGIKGHRGFPGNPGAPGAPGPAGHQGAVGSPGPAGPR
GPVGPSGPPGKDGTSGHPGPIGPPGPRGNRGERGSEGSPGHPGQPGPPGPPGAPGPCCGA
GGGVFPSIGGEKAGGFAPYYGDEPMDFKINTEEIMTSLKSVNGQIESLISPDGSRKHPAR
NCRDLKFCHPELQSGEYWIDPNQGCKLDAIKVFCNMETGETCINASPVNVPRKNWWIDSG
AEKKHVWFGETMDGGFQFSYGNPDLPEDILDVQLAFLRLLSSRASQNITYHCKNSIAYMD
QASGNVKKALRLMGSNEGEFKAEGNSKFTYTVLEDGCTKHTGEWGKTVFEYRTRKAVRLP
IVDIAPYDVGGPDQEFGVDIGPVCFL
NT seq
4401 nt
NT seq
+upstream
nt +downstream
nt
atgacgagctttgtgcaaaaggggacctggttacttcttgctctgcttcatcccactgtt
attttggcacaacaacaggaagctgttgatggaggatgctcccatcttggtcagtcctat
gcggatagagatgtctggaagccagaaccttgccaaatatgcgtctgtgactcaggatct
gttctctgcgatgacataatatgtgacgaacaagaattagactgtcccaacccagagatc
ccttttggagaatgttgtgcagtttgcccacagcctccaacagctcctcctcgccctcct
aatggtcatggacctcaaggccctaagggagatccaggccctcctggtattcctgggaga
aatggtgatcctggtattccaggacagccaggttcccctggttctcctggcccccctgga
atctgtgaatcatgccctactggtcctcagaactattctccccagtttgaatcatacgat
gtcaagtctggagtagtaggaccaggaattgcaggctaccccgggccacctggtccccct
ggccctcctggtcctcctgggacatctggtcatcctggctctccaggttctccaggatac
caaggtccccctggtgaacctgggcaagctggtcctgcaggccccccaggaccctctggt
gctataggcccatctggtcctgctggaaaagatggggaatcaggaagacctgggcgacct
ggagagcgagggttgcccggacctccaggtatgaagggtccagctggcatgcctggattc
cctggtatgaaaggacatagaggctttgatggacgaaatggagaaaaaggtgaaacaggt
gctcctggattaaagggggaaaatggcctgcctggtgaaaacggagctcctggacccatg
ggtccaagaggagctcctggtgaaagaggacggccaggacttcccggagccgcaggggct
cgaggtaatgatggtgctcgcggaagtgatggacaaccaggtccccctggtccccctgga
actgcaggattccctggttcccctggtgctaagggtgaaattggacctgcaggatctcct
ggttcaagtggctcccctggacaaagaggagaaccaggacctcagggacacgctggtgct
ccaggtcctcctggccctcctgggaccaatggtagtcccggtggtaaaggcgaaatgggt
cctgctggcatccctggggctcctggactgataggaccccggggtcctcctggaccatct
ggaaccaatggtgctcctggacagcgaggggctgcgggtgaacctggtaaaaacggtgcc
aaaggagagccagggccacgtggtgaacgtggtgaagctggttctccaggtatcccaggg
cctaaaggtgaagacggcaaagatggttcgcctggagaacctggtgcaaatggacttccg
ggagcagcaggagaaaggggtgttcctgggttccgaggacctgctggagcgaacggcctt
ccaggagaaaagggcccccctggggagcgtggtagtccaggccctgcagggccccgagga
gctcctggagaacctggccgagatggtgtccctggaggtccaggaataaggggcatgcct
ggaagcccaggaggaccaggcagtgatgggaaaccaggacctcccggaagtcaaggagaa
agtggccgaccaggtcctccaggcccatctggtccccgaggtcagcctggtgtcatgggt
ttccctggtcctaaaggaaatgatggtgcaccaggcaagaatggagaacgaggtggtcct
ggaggtcctggccctcagggtcctgctgggaaaaatggtgaaactggacctcagggcccc
ccaggacctaccgggccagctggtgacaaaggagatgtaggaccccctggtccacaagga
ttacaaggcttaccaggaaccagtggacctccaggagaaaatggaaaacctggagaacca
ggtccaaagggtgaagctggttcacccggaactccaggaggcaagggtgattccggtgcc
cccggtgaacgtgggccccctggagccttggggcccgctggaccgagaggtggagctggc
ccccctggtcccgaaggaggaaaggggcctgctggtccccctgggccacctggccttgct
gggactcctggtctgcaagggatgcctggagaaagaggaggtcctggaggccctggtccc
aagggtgacaagggtgaaccaggcagttcaggtactgatggtgctccagggaaagatggt
ccaaggggtcctactggtcccattggtcctcctggcccagctggccagcctggagataag
ggtgaaggtggtgcccctggacttccgggtatagctggtcctcgtggtggccctggtgag
agaggtgaacatgggcctccaggacctgctggcttccctggtgctcctggacagaatggt
gagcccggtgctaaaggagaaagaggtgctcctggtgagaaaggtgaaggaggcccccct
ggagtcgcagggccccccggaggttctgggcctgctggtccccctggtccccagggtgtc
aaaggtgaacgtggcagtcctggtggtcccggttctgctggcttccccggtggtcgtggt
cctcctggtcctcctggtaataatgggaacccaggccccccaggccccaccggtgctcca
ggcaaggatgggccccctggtccacctggtagcagtggtgctcctggaagccctggagtg
tctggacccaaaggtgatgctggccagcctggtgagaagggatctcctggcgcccagggc
cccccgggagctccaggcccacttggcattgccgggattacgggagcaaggggtcttgca
ggaccaccaggcataccaggtcccaggggaagcccaggcccgcagggcgtcaagggtgaa
agtgggaaaccaggatctcctgggcacaatggagaacgtggtgctcctggaccccagggt
cttcctggtctggctggtgcagctggtgaacctggaagggatggaaacccaggatcagat
ggtctgccaggccgagatggagctcctggtggcaagggtgaccgtggagaaaacggctct
cctggtcctcctggtgctcctggtcatccaggcccacctggccccgtcggtccggctgga
aagaatggtgacagaggagaaaccggccctgctggtccttctggggctccaggtcctgct
ggctcccgaggtgctcctggtccccaaggcccacgtggtgacaaaggtgaaacaggtgaa
cgtggttctaatggcatcaaaggacatcgaggattccctggtaatccaggagccccaggt
gctccaggtcctgctggtcaccaaggtgcagttggtagtccaggacccgcaggccccaga
ggacctgttggacccagtgggccccccggcaaagatggaacaagtggacatccaggtccc
attggacccccggggcctcgaggtaacagaggtgaaagaggatctgagggctccccaggt
cacccaggacaaccgggtcctcctggacctcctggtgcccctggtccatgctgtggtgct
ggtgggggtgtcttccctagtattggaggtgaaaaagctggcggatttgccccatattat
ggagatgaaccaatggatttcaaaatcaacaccgaggagattatgacctcactcaaatca
gtcaatggacagatagagagcctcattagtcctgatgggtcccgtaaacacccagctcgg
aactgccgagacctgaagttctgccatcctgaactccagagtggagaatattggattgat
cctaaccaaggctgcaagttggatgctattaaagtattctgtaatatggaaactggggaa
acatgcataaatgccagtcctgtgaatgttccacgtaagaactggtggatagattctggt
gctgagaagaaacatgtttggtttggagaaaccatggatggtggttttcagtttagctat
ggcaatcctgaccttcctgaagatatcctcgatgtccagctggcattcctccgacttctc
tccagccgggcctcccaaaacatcacgtatcactgcaagaatagcattgcatacatggat
caggccagtgggaatgtaaagaaagccctgaggctgatgggttcaaatgaaggtgaattc
aaggctgaagggaatagcaaattcacatacacagttctggaggatggttgcactaaacac
actggggaatggggcaaaacagtcttcgaatatcgaacacgcaaggccgtgagattacct
attgtagatattgcaccctatgatgttggtggtcctgatcaagaatttggtgtggacatt
gggcccgtttgctttttataa
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integrated database retrieval system
