Prionailurus bengalensis (leopard cat): 122481853
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Entry
122481853 CDS
T07574
Symbol
COL4A4
Name
(RefSeq) collagen alpha-4(IV) chain isoform X1
KO
K06237
collagen type IV alpha
Organism
pbg
Prionailurus bengalensis (leopard cat)
Pathway
pbg04151
PI3K-Akt signaling pathway
pbg04382
Cornified envelope formation
pbg04510
Focal adhesion
pbg04512
ECM-receptor interaction
pbg04820
Cytoskeleton in muscle cells
pbg04926
Relaxin signaling pathway
pbg04933
AGE-RAGE signaling pathway in diabetic complications
pbg04974
Protein digestion and absorption
pbg05146
Amoebiasis
pbg05165
Human papillomavirus infection
pbg05200
Pathways in cancer
pbg05222
Small cell lung cancer
Brite
KEGG Orthology (KO) [BR:
pbg00001
]
09130 Environmental Information Processing
09132 Signal transduction
04151 PI3K-Akt signaling pathway
122481853 (COL4A4)
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
122481853 (COL4A4)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
122481853 (COL4A4)
09142 Cell motility
04820 Cytoskeleton in muscle cells
122481853 (COL4A4)
09150 Organismal Systems
09152 Endocrine system
04926 Relaxin signaling pathway
122481853 (COL4A4)
09154 Digestive system
04974 Protein digestion and absorption
122481853 (COL4A4)
09158 Development and regeneration
04382 Cornified envelope formation
122481853 (COL4A4)
09160 Human Diseases
09161 Cancer: overview
05200 Pathways in cancer
122481853 (COL4A4)
09162 Cancer: specific types
05222 Small cell lung cancer
122481853 (COL4A4)
09172 Infectious disease: viral
05165 Human papillomavirus infection
122481853 (COL4A4)
09174 Infectious disease: parasitic
05146 Amoebiasis
122481853 (COL4A4)
09167 Endocrine and metabolic disease
04933 AGE-RAGE signaling pathway in diabetic complications
122481853 (COL4A4)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
pbg04147
]
122481853 (COL4A4)
00536 Glycosaminoglycan binding proteins [BR:
pbg00536
]
122481853 (COL4A4)
Exosome [BR:
pbg04147
]
Exosomal proteins
Exosomal proteins of other cancer cells
122481853 (COL4A4)
Glycosaminoglycan binding proteins [BR:
pbg00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
122481853 (COL4A4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Collagen
C4
Motif
Other DBs
NCBI-GeneID:
122481853
NCBI-ProteinID:
XP_043433944
LinkDB
All DBs
Position
C1:complement(211100272..211235469)
Genome browser
AA seq
1686 aa
AA seq
DB search
MASIKCSFRWIKPLATDPWLLILILFSVQHVYASGKKFIGPCGGRDCSVCQCFPEKGSRG
QPGLPGPQGPIGPLGLPGPIGIPGEKGMRGDSGPPGAAGDKGDKGPTGVPGFPGLDGIPG
HPGPPGSRGKPGMHGYNGSRGDTGLPGERGVPGLRGPPGLPGENGEKGNSVFILGAIKGI
PGDRGDPGPPGLPGSRGARGPAGPMGHPGEPGLPGAPGHPGRPGLKGNPGVGVKGQMGEP
GEVGQQGSPGPTLLVQPPDSCLYKGEKGIKGMPGVTGPPGPPGPKGKPGFGAKGEKGVPG
FSGPRGDPGSYGLPGFPGLKGEPGLFGDPGSFGFLGPKGDPGDRGYPGPPGVLVTPSLPL
KGPPGDPGRPGRYGETGSVGPPGPPGPSGPPGETCAGMMGPPGPGGFPGHPGFPGAAGIP
GRADSTPGKPGSPGPPGLPGAPGLQGPPGSDVIYCSVGHPGPQGIKGKAGPPGRRGSKGE
KGNAGLCACEPGPMGPPGPPGLPGRQGSKGDLGLPGWLGEKGHPGPPGAEGSPGPPGKPG
AAGPLGSKGEKGDMVVSRVKGQKGERGPDGLPGFPGQQGQHGRDGLPGERGDPGPPGDHE
DAAPGAKGSPGLPGPPGRTGPKGQPGLGFPGPPGERGPPGAPGRPGERGLEGLKGQKGDT
ISCNVTYPGRPGPPGFDGAPGPKGLPGPPGAPGLRCLDGPKGQRGKPGISEIPGPPGFRG
DVGDPGFGGAKGSSLPGPPGSPGSRGANGQKGIMGDTAYGHPGPPGERGLAGVPGSKGHR
GDPGPPGFAGPAGLPGFPGLKGPRGREGSAGFPGIPGPPGHSCERGAPGTPGQPGLPGAP
GSPGAPGWKGQRGDVGPPGPAGMKGLPGVPGRPGVDGPPGPPGLPGPIGDDGLPGLPGPK
GSQGLPGFPGFPGERGKPGLEGHPGHKGEPGERGRPGFLGDKGVKGAKGARGPPGDEGEM
AVISLKGKTGEPGPPGDSGFPGAEGDKGNPGMQGRRGEPGRYGPPGFHRGEPGRTGHPGL
PGAPGPPGSPGLRGIIGFPGFPGDQGEPGSPGSPGISGSDGLRGPKGNKGDPASQFGPPG
PEGEPGSPGCPGHLGAPGERGLPGVQGPRGPPGRPGLPGSSGPPGCPGDPGVPGLKGHPG
DMGDPGPRGMMGDLGTPGLPGIKGPSGSPGLNGLHGLKGQKGAKGASGSHEVGPPGPMGI
PGPKGETGDPGSPGISPPGLPGEKGPPGPPGRPGSPGPAGATGRAPEGDIPDPGSPGDQG
PPGPDGPRGAPGPPGPPGSVDLPKGEPGDRGLPGPPGPPGPPGPPGRKGFPGCDGKDGQK
GPIGFPGLQGPPGLPGSPGEKGLPGFPGRQGPPGPPGARGEPGPPADVDSCPRIPGLPGV
PGPRGPEGGMGPPGMRGPPGAGCKGESGPDGRRGEDGLPGSPGPPGSKGDTGEAGCPGAP
GPPGPIGDPGPKGFGPGYLSGFLLVLHSQTDGEPTCPAGMPRLWTGYSLLYLEGQEKAHN
QDLGLPGSCLPMFSTLPFAYCNIHQVCHYARRNDRSYWLASAAPLPMMPLSEEEIRPYIS
RCAVCEAPAQVVALHSQDQSIPPCPRTWRSLWIGYSFLMHTGAGDQGGGQALMSPGSCLE
DFRAAPFLECQGRQGTCHFFANEYSFWLTTVRPDLQFSSVPSPDTFKESQAQRQRISRCQ
VCMKYS
NT seq
5061 nt
NT seq
+upstream
nt +downstream
nt
atggcgtcaataaagtgctcattcaggtggatcaagccattggccacagatccctggttg
cttatacttatcctgttttctgtacaacacgtatatgcgagtggaaagaagtttattggg
ccttgcggaggaagagattgctcagtttgccagtgctttcctgaaaaagggtctcggggt
caaccaggactcccagggccacagggtcctattggacccctgggactgccaggacccatt
ggaattccaggagagaaagggatgagaggtgacagcggccctcctggagcagccggtgac
aaaggtgataagggtccaactggtgttcctggatttccaggtttggatggcatacctggg
cacccggggcctcctggatccaggggcaagcctggcatgcatgggtacaatggctcgaga
ggtgatacagggcttccaggagaaagaggagttcctggcctaagaggccccccaggcctt
cctggggaaaatggagaaaaaggaaattctgtgttcattttaggtgccattaaaggcatt
ccgggtgacagaggggacccaggacctcctggcttgccgggatctaggggtgcaagagga
ccagcgggcccaatgggacatccaggagaacctgggttaccaggtgctccgggccatcct
gggagaccaggcttgaagggtaatcctggcgtgggagtgaaggggcaaatgggagaaccg
ggtgaagttggccagcaaggttctcctggacccaccttattggtacagccacctgattct
tgtctgtataaaggagaaaagggcataaaaggaatgcctggtgtaactggacctccagga
ccaccgggacccaagggaaaacctggatttggggccaaaggagagaagggtgttcctggg
ttctcaggaccgcggggtgatcctggttcctatggattgccaggctttccaggattaaag
ggggaaccaggactgtttggagatcctggatcatttggatttcttggcccaaagggggac
cctggagatcgcgggtacccaggaccaccgggtgttttggtaactccatctcttccgctc
aaaggccctccaggggatccggggcgccctggccgctatggagaaacggggtctgttgga
ccgcctggtccccctggtccctcaggaccaccaggggaaacctgtgcaggcatgatggga
ccccctgggccaggggggtttcctggtcatcctggatttccaggggcagccggtatcccc
gggagagctgattccactccagggaaaccagggagcccgggaccacctgggttgcctgga
gctccaggactgcagggccctccaggatcagatgttatatattgtagtgtcgggcaccct
ggaccacaaggaataaaaggcaaagcaggtcctccaggaagaagaggctcgaaaggagaa
aaaggaaacgcggggctctgtgcctgtgagcctggtcccatgggcccaccaggccctccg
ggacttcctgggaggcagggtagtaagggagacttggggctccctgggtggcttggagag
aaaggtcatccaggccctccgggtgctgaaggatctccaggaccaccaggaaaacccggt
gctgcaggaccacttggcagtaaaggagaaaagggagacatggttgtgtcaagagtgaaa
gggcagaaaggagaaaggggtcctgatgggctcccaggatttccagggcaacagggacaa
catggccgggatggacttcctggagaaaggggggatccgggacccccgggggatcatgaa
gacgcagccccaggtgcaaaagggtctcctggattgccggggcccccgggaagaacagga
cctaagggacaaccaggactaggatttcccgggccaccaggagaaagagggccaccagga
gctccaggccgtcccggcgagaggggccttgagggcttgaagggtcagaaaggcgataca
atttcttgtaatgtaacctaccctgggaggccaggacctccaggttttgatggagctcca
ggaccaaagggacttccgggccctccgggcgctccagggttgaggtgtttagatgggcca
aagggtcagcgtggcaaaccaggaatatcagaaatacctggtccacctggttttcgtggt
gacgtaggagatccaggttttggaggtgcaaaggggtcctcccttcctgggcccccaggc
tctcccggttctcgtggagcaaatgggcagaaaggaatcatgggagacactgcctacggc
cacccaggtcccccgggagagagaggtcttgcaggggtgccggggtcaaaaggacataga
ggtgatccaggacctccaggctttgcagggccggctggtttgcctggattcccaggtctc
aaaggccccagaggcagagagggaagtgctgggtttccagggatcccaggtccacctggc
cattcctgtgaaagaggcgccccaggaacaccagggcaacccggactccccggggctccg
ggcagtccaggcgccccaggttggaaaggacagcgaggggatgtggggcctcctggtccg
gctggaatgaagggtctccctggagtcccaggacggccaggggtagatggaccccccgga
cccccagggctcccaggccccataggcgatgatggactgcctggtcttccaggcccaaag
ggatcccaggggctgcctggcttcccaggtttcccaggggagagaggaaagcctggcctg
gaggggcaccctggccataaaggggaaccaggagagaggggtcggcctggcttcctcgga
gacaagggggtgaaaggcgccaaaggagcaaggggacccccaggagatgaaggagagatg
gctgtaatttccctaaaggggaaaaccggggaacctggacctcctggagatagtggattc
ccaggggcagaaggtgataaaggcaatccggggatgcaggggaggagaggagagccggga
agatacggaccacctggatttcacagaggggagcctggtagaaccgggcacccggggctc
cctggagccccaggccctccaggctcacccgggctgagaggcattattggttttccagga
tttccaggtgaccagggtgaaccaggttctccagggtcccctggaatttcaggaagcgat
ggactgagaggccctaaaggaaacaaaggggaccctgctagtcagtttggcccacctggt
cccgagggagaaccaggtagccctggatgtccaggacatcttggagcacctggagagcgg
ggcttgccgggtgttcaagggcccagaggaccacctggaaggccaggactacctggctcc
tccggaccaccaggctgtccaggtgatccaggagtacctgggctgaagggacatccagga
gacatgggggatcctgggccaagaggcatgatgggggacctggggacaccaggtcttccg
ggaattaaaggtccctccgggtcgcccggtctgaacggcttacatggtttaaagggtcag
aaaggagccaaaggcgcttcaggttcgcatgaagtgggcccacctggcccaatgggcata
cctgggccgaaaggggagacaggagaccccgggagcccaggaatttctcccccaggcctt
cctggagaaaaaggtccccccgggcccccagggagacctggatcacctggtcccgcaggt
gccacaggaagagctcctgaaggtgacattcctgacccagggtcccccggcgatcaggga
cctcccggccccgatggtccaagaggagcacccgggcccccgggcccccctgggagtgtt
gaccttccgaaaggggaaccaggagaccggggtctgccgggtcccccgggccccccgggc
cccccaggccctccaggacgcaaaggcttcccaggatgtgatggaaaagatggccagaaa
ggaccaattggattcccgggactgcaggggccacctggacttccgggatctcctggggag
aagggtttacctggctttccaggcagacaagggccccctgggcctccaggtgccagaggt
gaaccggggccacctgcagatgtggattcctgtccccgaatccccgggcttcctggggtg
ccaggcccaagaggaccagaaggaggcatggggccccccggaatgagaggccccccagga
gcagggtgcaaaggagagtcggggccggatggcaggaggggcgaggatggcctcccaggg
tctcctgggcctcctggaagcaaaggggacacgggagaagcgggctgtcccggagcacca
ggccctcctgggcccattggggatcccgggcccaaagggtttgggcctggatacctcagt
ggcttcctcctggttctccacagtcagacagatggagaacccacctgcccagcgggcatg
cccaggctgtggacgggctacagtctgttgtacctggaaggacaggagaaggctcacaac
caagacctgggtctgccggggtcttgccttcccatgtttagcacactgccctttgcctac
tgtaacatccaccaagtctgccactacgcccggagaaacgaccgatcgtactggctggcc
agcgccgcgcccctgcccatgatgccgctctcggaagaagagatccgcccgtacatcagc
cgctgtgccgtgtgcgaggccccggctcaggtggtggctctgcacagccaggaccagtcc
atccccccgtgtccacggacctggaggagcctctggatcgggtactcgttcctgatgcac
acaggggctggggaccaaggaggagggcaggccctcatgtccccgggcagctgcctggaa
gattttcgagcagcgccgttcctcgaatgccaaggccgccagggaacttgccactttttt
gcaaacgagtatagcttctggctgacaacagtgaggcctgacctgcaattttcctcggtg
ccatcaccagacaccttcaaagaaagccaggcccagcggcagagaatcagcagatgccag
gtctgcatgaaatacagctag
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