Prionailurus bengalensis (leopard cat): 122483313
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Entry
122483313 CDS
T07574
Symbol
PCDH20
Name
(RefSeq) protocadherin-20
KO
K16498
protocadherin delta 1
Organism
pbg
Prionailurus bengalensis (leopard cat)
Pathway
pbg03273
Virion - Lassa virus and SFTS virus
Brite
KEGG Orthology (KO) [BR:
pbg00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03273 Virion - Lassa virus and SFTS virus
122483313 (PCDH20)
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
pbg01009
]
122483313 (PCDH20)
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
pbg04515
]
122483313 (PCDH20)
Protein phosphatases and associated proteins [BR:
pbg01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
122483313 (PCDH20)
Cell adhesion molecules [BR:
pbg04515
]
Cadherins
Protocadherins
122483313 (PCDH20)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Cadherin
Cadherin_2
Cadherin_CELSR2_9th
Motif
Other DBs
NCBI-GeneID:
122483313
NCBI-ProteinID:
XP_043436130
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Position
A1:complement(37476153..37482103)
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AA seq
952 aa
AA seq
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MRGRGNARSSRALAVSWRPATWHPRLDMGRLSRPRSSTSHRSLPHLFLFFLFVGPFNCLA
SYSRATELLYSLNEGLPAGVLIGSLAEDLRLVPRAAGRQNQLPQLPERTLAERSPPLSFS
LASRGLSGQYVTLDNRSGELHTSDQEIDREALCLEGGGGGAWGGSISISSSPSSDSCLLL
LDVLVLPQEYFRFVKVKIAIRDINDNAPQFPVSQISVWVPENAPVNTRLAIEHPAMDPDI
GTNGVQTYRLLDYHRMFTLDVEENENGERTPYLIVMGLLDRETQDQYVSIIIAEDGGSPP
LLGSATLTIGITDINDNCPLFADSQINVTVFGNATVGTPVAAVQAVDRDLGTNAQITYSY
SQKVPQASKDLFHLDETTGVIKLFSKIGGSVLQTHKLTILANGPGCIPAVTTALVTIIKV
IFRPPEIVPRYIANEVDGIVYLKELEPINTPIAFFTIRDPEGKYKVNCYLDGEGPFRLSP
YKPYSNEYLLETTKLMDYELQQFYEIAVVAWNSEGFHVKKIIKVQLLDDNDNAPIFLQPL
LELTIEENNAPNAFLTKLYATDADSGERGQVSYFLGPDAPSYFSLDSVTGILTVSTQLDR
EEKEKYRYTVRAVDSGKPPRESVATVALTVLDKNDNSPRFINKDFSFFVPENFPGYGEIG
VISVTDADAGRNGWVALSVVNQSDIFVIDTGKGMLRAKVSLDREQQSSYTLWVEAVDGGE
PALSSTAKITILLLDINDNPPLVLFPQSNMSYLLVLPSTLPGSPVTEVYAVDKDTGMNAV
IAYSIIGRRGPRPESFRIDPKTGNITLEEALLQTDYGLHRLLVKVSDHGYPEPLHSTVMV
NLFVNDTVSNESYIESLLRKEPEINIEEKEPQISIEPTHRKVESVSCVPTLVALSVISLG
SITLVTGMGIYICLRRGKKHHREDENLEVQIPLKGKIDLHMRERKPVAISNI
NT seq
2859 nt
NT seq
+upstream
nt +downstream
nt
atgcgcggccgagggaatgcgcgcagctcgcgggccctggcagtgagctggcgcccggcg
acctggcacccgcgcctggatatggggcgtctaagtcgtcccaggagcagcaccagccac
agaagcctgccgcatctctttctgtttttcctcttcgtgggacccttcaactgcctcgca
agttacagccgggccacggagcttctgtacagcctgaacgagggactgccggcgggggtg
ctcatcggcagcctggccgaggacctgcggctggtgccccgagccgccgggaggcagaac
cagctgccgcagctgcctgagcgcaccctggctgagcggagcccccctctctccttcagc
ctggcttcccggggactgagtggccagtacgtgaccctagacaaccgctccggggagctg
cacacttctgaccaggagatcgaccgggaggccctgtgtctagaaggaggtggaggaggt
gcctggggcggcagcatttccatctcctcctccccttcctctgactcttgtcttttgctt
ctggacgtactggtcctgcctcaggagtactttcggtttgtgaaggtgaaaatcgcaatc
cgggacattaatgacaatgccccgcagttccccgtttcccaaatctcagtttgggtgcca
gaaaacgcacctgtaaacacccggctggccatagagcaccctgccatggacccagatata
ggcacgaatggggtgcagacctaccgtttgctggactaccatcgcatgttcaccctggat
gtggaggagaatgagaatggggagcgcactccctatctaattgtcatgggactactggac
agggagacccaggaccagtatgtgagcatcatcatagcagaggatggtgggtccccacca
ctgctgggcagcgccaccctcaccattggcataactgacattaatgacaattgccctctc
ttcgcagactcacaaatcaatgtcactgtgtttgggaatgctacagtgggcacaccggtt
gcagctgtccaggctgtggatagagacttgggaaccaatgctcagatcacttactcgtac
agccagaaagttccacaggcatccaaggatttattccatctggatgaaaccaccggagtc
attaaacttttcagtaagatcggggggagtgttctgcaaacgcacaagctcaccatcctt
gccaacgggccaggctgcatccccgctgtgaccacggccctggtgaccattatcaaagtc
attttcagaccacctgaaattgtgcctcggtatatagcaaatgaggtggatggtattgtt
tacctgaaagaactggagcctattaacactccaattgcattcttcaccataagagatcca
gaaggtaaatacaaggtgaactgctacctggacggtgaaggaccatttcggttatcacct
tacaaaccatacagtaacgaatatttgctggaaaccacaaaacttatggactatgagcta
cagcagttctatgaaatagctgtggtggcctggaactctgagggatttcatgtcaaaaaa
attattaaagtgcaacttttagatgacaatgacaatgcccctattttcctgcaacccttg
ctggaactaactattgaagaaaacaacgcacccaatgcctttttgactaagctctatgct
acagatgctgacagtggagagagaggccaggtttcctattttctgggacctgatgcccca
tcgtatttttccttagacagtgtcacaggaattctgacagtttctactcagctggaccga
gaagagaaagaaaagtacaggtacacagtcagagctgttgactctgggaagccacccaga
gaatcagtagccactgtggctctcacggtgttggataaaaatgacaacagccctaggttc
atcaacaaggacttcagcttttttgtgccagaaaactttccaggatatggtgaaattggg
gtaattagtgtgacagatgctgatgccggacgaaatggatgggtcgccctctcggtggtg
aaccagagtgatatttttgtcatagacacaggaaagggcatgctgagagccaaagtctct
ttggacagagagcagcagagctcctatactttgtgggtcgaagctgttgacgggggcgag
cctgccctctcttcaactgcaaaaatcacaattctccttctagatatcaatgacaaccct
cctcttgttctgttccctcaatctaacatgtcctacctgttggtactgccttctactctg
cccggctccccagtcacagaggtctatgctgttgacaaagacacgggcatgaacgctgtc
atagcttacagcatcataggaagaagaggtcctaggcccgagtcctttaggattgaccct
aaaaccggcaacattactttggaagaggcattgctgcagacagattatggactccatcgt
ttactggtgaaagtgagcgatcatggttatcccgaacctctccactccacggtcatggtg
aatctatttgtcaacgacactgtcagtaacgagagctacattgagagtcttttaagaaag
gaaccagaaattaacatagaggagaaagaaccacagatctccatagaaccaactcacagg
aaagttgagtctgtgtcctgtgtgcctaccttagtagctctgtctgtaataagcttgggt
tccatcacacttgtaacagggatgggcatatacatctgtttaaggagagggaaaaagcat
cacagggaagacgaaaatttggaagtacaaattccactcaaaggaaaaatcgacttgcat
atgagagagaggaaaccagtggctatttctaatatttga
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