Prionailurus bengalensis (leopard cat): 122484089
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Entry
122484089 CDS
T07574
Symbol
IGHMBP2
Name
(RefSeq) DNA-binding protein SMUBP-2 isoform X1
KO
K19036
ATP-dependent RNA/DNA helicase IGHMBP2 [EC:
5.6.2.5
5.6.2.3
]
Organism
pbg
Prionailurus bengalensis (leopard cat)
Brite
KEGG Orthology (KO) [BR:
pbg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
pbg03009
]
122484089 (IGHMBP2)
03012 Translation factors [BR:
pbg03012
]
122484089 (IGHMBP2)
Enzymes [BR:
pbg01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.3 DNA 5'-3' helicase
122484089 (IGHMBP2)
5.6.2.5 RNA 5'-3' helicase
122484089 (IGHMBP2)
Ribosome biogenesis [BR:
pbg03009
]
Eukaryotic type
Other ribosome biogenesis factors
122484089 (IGHMBP2)
Translation factors [BR:
pbg03012
]
Eukaryotic type
Initiation factors
Initiation associated factors
122484089 (IGHMBP2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_11
AAA_12
SMUBP-2_HCS1_1B
R3H
AAA_30
AAA_19
zf-AN1
Viral_helicase1
DEAD
ResIII
nSTAND3
AAA_16
SLFN-g3_helicase
AAA_22
UvrD-helicase
Flavi_DEAD
NAT10_TcmA_helicase
IstB_IS21
AAA_25
AAA
nSTAND_NTPase5
PhoH
Ada3
ABC_tran
UvrD_C_2
NPHP3_N
Zot
DnaB_C
NTPase_1
AAA_18
AAA_33
Motif
Other DBs
NCBI-GeneID:
122484089
NCBI-ProteinID:
XP_043437859
LinkDB
All DBs
Position
D1:111688357..111715367
Genome browser
AA seq
987 aa
AA seq
DB search
MASAAVESFVSKQLDLLELERDAEVEERRSWQENISLKELQSRGVCLLKLQVSSQRTGLY
GRLLVTFEPRRCASATALPSNSFTSGDIVGLYDEGGQLATGILTRIMQRSVTVAFDESHD
FQLSLDRERAYRLLKLANDVTYKRLKKALITLKKYHSGPASSLIEVVFGGSPPSPAGETQ
PPPFCNTSLDASQKEAVSFALSQKELAIIHGPPGTGKTTTVVEIILQAVRRGLKVLCCAP
SNVAVDNLAERLARCQQKVLRLGHPARLLECIQQHSLDAVLARSDSAQIVADIRKDIDQA
FLKNRQTQDKREKSSFWNEIKLLRKELKEREEAAMLESLRSAAVVLATNTGASPDGPLKL
LPDGHFDVVVIDECAQALEASCWIPLLKAGKCILAGDHKQLPPTIVSPKAAAAGLARSLM
ERLAEEQGASVVRTLTVQYRMHRAIMQWASEALYHGRLTAHPSVAGHLLRDLPGVAATEE
TGIPLLLVDTAGCGLFELEEEDDQSKGNPGEVRLVSLHVQALVEAGVRASDIAVITPYNL
QVDLLRQSLAHRHPELEIKSVDGFQGREKEAVVLSFVRSNRKGEVGFLAEDRRINVAVTR
ARRHVAVVCDSRTVNNHAFLKTLVDHFTEHGEVRTAFEYLDDIVPENYSHESSQGHGQAG
ARPRGPAAAAGKPPGSRPREGVREARAAAGLQRKTPGGKPSGPEVGSQPSLNGGGLCPEA
ADGRDRADRFRAEIAEFVASENTRLEFPASLNSHDRMWIHQIAEEHGLRHDSSGEGKKRF
ITVSKRAPPAPPPPVGGPTAPGPTEAEPPPGEQSGRDPPDLKALHLERLRREKSRREPQA
EQGQRASRSGPRKLPEKKKKKEAKGHVAIDLPGEEDFDALVSAAVKADNTCGLAKCTASV
ATLGQLCLHCGRRFCLSHHLPEIHGCGERARAHARQRISREGVLYAGSGTKDRSLDPAKR
AQLQRRLDKKLDELTSQRKSKRKEKEK
NT seq
2964 nt
NT seq
+upstream
nt +downstream
nt
atggcctcggcggctgtggagagcttcgtgagcaagcagttggacctgctggagctcgag
agagacgcggaggtcgaggagcgcaggtcctggcaggaaaacatctctctgaaagaactc
cagagccgaggggtctgtttgctgaagctgcaggtgtccagccagcggaccgggctgtac
gggcggctgctggtcaccttcgagcccaggagatgtgcgtctgccacggcccttcccagc
aacagctttacttccggagatatagtgggtctgtatgacgaaggcggtcagctggccacg
gggatcctgacccggatcatgcagagatcggtcacagtagcctttgatgagtcccatgat
ttccagctgagcttagaccgagagcgtgcctacagactgttaaaactcgccaatgacgtc
acttataagcggctgaaaaaagctctcattaccctaaagaagtatcattctggccccgcg
agctccctcatagaggtcgtcttcggtggatcaccccccagtcctgccggtgaaacacag
ccgccgccgttctgtaacacctccctggacgcctcccagaaggaagccgtctcctttgcg
ctgtcccagaaggaacttgccatcatccacgggcctcctggcactgggaagaccaccact
gtggtcgagatcatccttcaggctgtgagacggggcttaaaggtgctgtgctgtgccccc
tctaacgtcgccgtggataacctggcagagcggctggcgcggtgtcagcagaaggtcctg
cgcctcgggcaccccgcccggctgctggagtgcattcagcagcactccctcgacgccgtg
ttggcacgcagcgacagcgcccagatcgtcgcagacatcagaaaggacatcgatcaggcc
ttcttgaagaacaggcagacccaggacaagagagagaagagtagtttctggaacgaaatc
aagctgttacggaaagagctgaaggagagggaggaggccgccatgctggagagcctcagg
tcggcagccgtggtgctggcaacgaatacaggcgcttctcccgacggccctctgaagctg
ctgcccgacggccacttcgacgtggtggtcatcgacgagtgcgcccaggccctcgaagcc
agctgctggatccccctgctgaaggccgggaagtgcatcctggccggagatcacaaacag
ctgccgcccaccatcgtgtcccccaaggctgcggcggcgggcctggcgcgcagcctgatg
gagcgcctggcggaggagcagggcgcgagcgtggtgcggacgctgacggtgcagtaccgc
atgcaccgggccatcatgcagtgggcctccgaggccctgtaccacgggcggctcacggcc
cacccttccgtggcgggccacctcctgcgggacctccccggggtggccgccacggaggag
acgggcatccccctgctgctcgtggacacggccggctgcgggctctttgaactcgaagag
gaggacgaccagtctaaggggaaccctggcgaggtgcgtctcgtcagcctgcacgtccag
gccttggtggaggctggcgtccgagcgagcgacattgccgtcatcaccccgtacaacctc
caggtggacctgctcaggcagagcctcgctcacaggcaccccgagcttgaaattaagtcg
gtcgatggcttccaaggccgagagaaggaggctgtggtcctgtccttcgtcagatccaat
aggaaaggcgaagtgggtttcctcgccgaggaccggcggatcaacgtggccgtcacccgc
gctcggcgccacgtggcggtcgtgtgtgactcgcgcaccgttaacaaccacgcctttctg
aagaccctggtggatcacttcacggagcacggcgaggtgcgcacggcctttgagtatctc
gatgacatcgtccctgaaaactactcccacgagagttcccagggccacggccaagctggc
gcgaggccccggggccctgccgcggctgccgggaagcctcctggaagccggccgcgggaa
ggggtccgggaggcccgggcggccgccgggctgcagcggaagacgcctggcgggaagccc
tcgggccccgaggtcggttctcagcccagcctcaacggaggcggcctctgcccggaggcc
gcggacggcagagaccgcgcggaccgcttcagggccgagatagcggagtttgtggcgagt
gagaacacgaggctggagtttcccgcgtccctgaactcacacgacaggatgtggatccac
cagatagcggaggagcacgggctgaggcacgacagcagcggcgaagggaagaagaggttc
ataaccgtgagcaagagggccccgcctgccccgccgcctccagtgggcggccccacggcc
cccggccccacggaggcggagccccctcccggggagcagagcggccgggaccccccggat
ctgaaggctctgcacctggaaaggctgcggagggagaagagccggcgggagccgcaggcc
gagcaggggcagcgggcctcgcgctcagggccgcgcaagttaccggagaagaaaaagaaa
aaagaagcaaaaggacacgtggccatagacttgcccggtgaggaggacttcgacgccctg
gtctcggccgccgtgaaggccgataacacctgcggccttgctaagtgcacagccagcgtc
gcgaccctgggtcagctctgcctgcactgcggccgccgcttctgcctcagccaccacctg
ccggagatccacggctgtggggagagagctcgcgcccacgcccggcagaggatcagccgg
gaaggagtcctctacgccggcagtgggaccaaggacaggtccctggacccagccaagagg
gcccagctccagaggaggctggataagaagctggatgagctgaccagccagaggaagagt
aaacggaaggaaaaggagaagtga
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