KEGG   Prionailurus bengalensis (leopard cat): 122485497
Entry
122485497         CDS       T07574                                 
Symbol
CASC3
Name
(RefSeq) protein CASC3
  KO
K14323  protein CASC3
Organism
pbg  Prionailurus bengalensis (leopard cat)
Pathway
pbg03013  Nucleocytoplasmic transport
pbg03015  mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:pbg00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    122485497 (CASC3)
   03015 mRNA surveillance pathway
    122485497 (CASC3)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:pbg03019]
    122485497 (CASC3)
Messenger RNA biogenesis [BR:pbg03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    EJC complex
     122485497 (CASC3)
SSDB
Motif
Pfam: Btz
Other DBs
NCBI-GeneID: 122485497
NCBI-ProteinID: XP_043440284
LinkDB
Position
E1:38805844..38828342
AA seq 703 aa
MADRRRQRASQDTEDEESGASGSDSGGSPARGGGSCSGSAGGGGSGSLPSQRGGRAGALH
LRRVESGGAKSAEESECESEDGMEGDAVLSDYESAEDSEGEEGEYSEEENSKVELKSEAN
DAANCSAKEEKGEEKPDTKGTVTGERQSGDGQESTEPVENKVGKKGPKHLDDDEDRKNPA
YIPRKGLFFEHDLRGQTQEEEVRPKGRQRKLWKDEGRWEHDKFREDEQAPKSRQELIALY
GYDIRSAHNPDDIKPRRIRKPRFGSPPQRDPNWIVERPNKSHRHQGPGGTLPPRTFINRN
AAGTGRMSAPRNYSRSGGFKEGRAGFRPVDAGGQHGGRSGETVKHEASYRSRRLEQTPVR
DPSPEADAQVLGSPEKEEAASEIPAAAPDAAPPAPDRPIEKKSYSRARRTRIKAGDAVKV
AEEVPPPPEGLNPAPPVPETTPSPPAKTGAWEAPVDSTTSGLEQDVAQLNITEQNWSPGQ
PSFLQPRELRGMPNHIHMGAGPPPQFNRMEEMGVQGGRAKRYSSQRQRPVPEPPAPPVHI
SIMEGHYYDPLQFQGPIYTHGDSPAPLPPQGMIVQPEMHLPHPGLHPHQTPAPLPNPGLY
PPPVSMSPGQPPPQQLLAPTYFSAPGVMNFGNPSYPYAPGALPPPPPPHLYPNTQAPSQV
YGGVTYYNPAQQQVQPKPSPPRRTPQPVTIKPPPPEVVSRGSS
NT seq 2112 nt   +upstreamnt  +downstreamnt
atggcggatcgtcggcggcagcgcgcttcgcaggacacggaggacgaggagtctggcgca
tcgggctcagacagcggcggctccccggcgcggggcggcgggagctgcagcggtagcgct
ggaggcggtggcagcggctctctgccttctcagcgcggaggccgagctggggcccttcat
ctgcggcgggtggagagcgggggggcgaagagcgccgaggagtcggaatgtgagagtgaa
gatggcatggagggcgatgctgttctctcggattatgaaagtgcagaagactctgaaggt
gaagaaggggaatacagtgaagaggaaaactccaaagtggagctgaaatcagaagccaat
gatgctgctaattgttcagcaaaagaagagaagggagaagaaaagcctgacaccaaaggc
actgtaactggagagaggcagagtggggatggacaggagagcacagagcctgtggagaac
aaagtgggtaaaaaaggccctaagcatttggatgatgatgaggatcggaagaacccagca
tacataccccggaaagggctcttctttgagcatgatcttcgagggcaaactcaggaggag
gaagtcagacccaaggggagacagcgaaagctatggaaggatgagggtcgctgggagcat
gataagttccgggaagatgaacaggctccaaagtctcgacaggagctcattgctctttat
ggctatgacatccgctcagctcacaatcctgatgacatcaaaccccgaagaatccggaaa
cccaggtttgggagtcctccgcaaagagatccaaactggattgttgagcgaccaaacaag
tcccatcgccatcagggtcctgggggcaccctaccaccaaggacatttattaacagaaat
gctgcaggtactggccggatgtctgctcccaggaattattctcgatctgggggcttcaag
gaaggtcgtgctggttttaggcctgtggatgctggtgggcagcatggtggccgatctggt
gagactgttaaacatgaagccagttaccggtcacggcgcctagagcagactcctgtgagg
gatccatctccagaagctgatgctcaagtgcttggcagtcctgagaaggaagaggcagcc
tcagagattccagctgctgctcctgatgctgcaccaccagcccctgacaggcctattgag
aagaaatcctattcccgggcaagaagaacgagaatcaaagctggagatgcagtcaaggtt
gcagaggaggtgccccctccacctgaagggctgaacccagcgcctccagtcccagaaact
accccttctccacctgctaagactggagcctgggaggctccagtggattctactacaagt
ggacttgagcaagatgtggcacaactaaatataacagaacagaattggagtccagggcag
ccttcgttcctacagccacgtgagcttcggggtatgcccaatcacatacacatgggagca
ggacctccacctcagtttaaccggatggaagaaatgggtgtccagggtgggcgagccaaa
cgctattcatctcagcggcagagacctgtgccggagccccctgcccctcctgtgcacatc
agtatcatggaaggacattactatgatccattgcagttccagggaccaatctatacccat
ggtgacagccctgccccactgcctcctcagggcatgattgtgcagccagaaatgcacctt
ccccacccaggtttacatccccaccagacaccggcacctctccccaatccgggcctctat
cccccaccagtgtccatgtctccaggacagccaccacctcagcagttgcttgctcctact
tacttttctgctccaggcgtcatgaactttggtaatcctagctacccttatgctccaggg
gcactgcctcccccaccgcctcctcatctatatcctaatacgcaggccccatcacaggta
tatggaggagtgacctactataaccctgcccagcagcaggtgcagccaaagccctcccca
ccccggaggactccccagccagtcaccattaagcccccacctcctgaggttgtaagcagg
ggttccagttaa

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