KEGG   Prionailurus bengalensis (leopard cat): 122485958
Entry
122485958         CDS       T07574                                 
Symbol
ALYREF
Name
(RefSeq) THO complex subunit 4
  KO
K12881  THO complex subunit 4
Organism
pbg  Prionailurus bengalensis (leopard cat)
Pathway
pbg03013  Nucleocytoplasmic transport
pbg03015  mRNA surveillance pathway
pbg03040  Spliceosome
pbg05014  Amyotrophic lateral sclerosis
pbg05168  Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:pbg00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    122485958 (ALYREF)
  09122 Translation
   03013 Nucleocytoplasmic transport
    122485958 (ALYREF)
   03015 mRNA surveillance pathway
    122485958 (ALYREF)
 09160 Human Diseases
  09172 Infectious disease: viral
   05168 Herpes simplex virus 1 infection
    122485958 (ALYREF)
  09164 Neurodegenerative disease
   05014 Amyotrophic lateral sclerosis
    122485958 (ALYREF)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:pbg03019]
    122485958 (ALYREF)
   03041 Spliceosome [BR:pbg03041]
    122485958 (ALYREF)
Messenger RNA biogenesis [BR:pbg03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    EJC complex
     122485958 (ALYREF)
    TREX complex
     122485958 (ALYREF)
Spliceosome [BR:pbg03041]
 Complex C
  Other components
   EJC/TREX
    122485958 (ALYREF)
 Other splicing related proteins
  Spliceosome associated proteins (SAPs)
   TREX complex
    122485958 (ALYREF)
SSDB
Motif
Pfam: RRM_1 FoP_duplication F07F6_N
Other DBs
NCBI-GeneID: 122485958
NCBI-ProteinID: XP_043441328
LinkDB
Position
E1:complement(59996974..60000846)
AA seq 257 aa
MADKMDMSLDDIIKLNRSQRGGRGGGRGRGRAGSQGGRGGGAQAAARVNRGGGPIRNRPA
IARGAAGGGGRNRPAPYSRPKQLPDKWQHDLFDSGFGGGAGVETGGKLLVSNLDFGVSDA
DIQELFAEFGTLKKAAVHYDRSGRSLGTADVHFERKADALKAMKQYNGVPLDGRPMNIQL
VTSQIDTQRRPAQSVNRGGMTRNRGSGGFGGGGGTRRGARGGSRGRGRGTGRSSKQQLSA
EELDAQLDAYNARMDTS
NT seq 774 nt   +upstreamnt  +downstreamnt
atggccgacaaaatggacatgtctctggacgacatcattaagctgaaccggagccagcga
ggcggccgcggcggaggccggggccgcggcagggccggctcccagggcggccgcggcggc
ggggcgcaggccgccgcgcgagtgaaccgaggcggcgggcccatccggaaccggccggcc
atcgctcgaggcgcggcgggcggcggcggcaggaaccggccggcgccctacagcaggccg
aaacaacttcccgacaagtggcaacacgaccttttcgacagcggtttcgggggcggcgca
ggcgtcgagacgggtgggaaactgctggtgtcaaatctggattttggagtatcggacgcc
gatattcaggagctcttcgctgagttcggaactctgaagaaggcggccgtacactacgat
cgctcagggcgcagtttaggaacagccgacgtgcactttgaacggaaggcagatgccctg
aaagcgatgaagcagtacaacggcgtccccctggatggccgccccatgaacattcagctc
gtcacgtcacagattgacacacagcggagacccgcacagagcgtaaacagaggcgggatg
accagaaaccgcggttccggaggcttcgggggcggtggcggcacccggagaggcgctcgc
ggaggaagccggggcaggggcagaggcaccggcaggagttcgaagcagcagctctccgcc
gaggagttggacgcccagctggacgcttataacgccagaatggacaccagttaa

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