Prionailurus bengalensis (leopard cat): 122485958
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Entry
122485958 CDS
T07574
Symbol
ALYREF
Name
(RefSeq) THO complex subunit 4
KO
K12881
THO complex subunit 4
Organism
pbg
Prionailurus bengalensis (leopard cat)
Pathway
pbg03013
Nucleocytoplasmic transport
pbg03015
mRNA surveillance pathway
pbg03040
Spliceosome
pbg05014
Amyotrophic lateral sclerosis
pbg05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
pbg00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
122485958 (ALYREF)
09122 Translation
03013 Nucleocytoplasmic transport
122485958 (ALYREF)
03015 mRNA surveillance pathway
122485958 (ALYREF)
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
122485958 (ALYREF)
09164 Neurodegenerative disease
05014 Amyotrophic lateral sclerosis
122485958 (ALYREF)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pbg03019
]
122485958 (ALYREF)
03041 Spliceosome [BR:
pbg03041
]
122485958 (ALYREF)
Messenger RNA biogenesis [BR:
pbg03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
122485958 (ALYREF)
TREX complex
122485958 (ALYREF)
Spliceosome [BR:
pbg03041
]
Complex C
Other components
EJC/TREX
122485958 (ALYREF)
Other splicing related proteins
Spliceosome associated proteins (SAPs)
TREX complex
122485958 (ALYREF)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
FoP_duplication
F07F6_N
Motif
Other DBs
NCBI-GeneID:
122485958
NCBI-ProteinID:
XP_043441328
LinkDB
All DBs
Position
E1:complement(59996974..60000846)
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AA seq
257 aa
AA seq
DB search
MADKMDMSLDDIIKLNRSQRGGRGGGRGRGRAGSQGGRGGGAQAAARVNRGGGPIRNRPA
IARGAAGGGGRNRPAPYSRPKQLPDKWQHDLFDSGFGGGAGVETGGKLLVSNLDFGVSDA
DIQELFAEFGTLKKAAVHYDRSGRSLGTADVHFERKADALKAMKQYNGVPLDGRPMNIQL
VTSQIDTQRRPAQSVNRGGMTRNRGSGGFGGGGGTRRGARGGSRGRGRGTGRSSKQQLSA
EELDAQLDAYNARMDTS
NT seq
774 nt
NT seq
+upstream
nt +downstream
nt
atggccgacaaaatggacatgtctctggacgacatcattaagctgaaccggagccagcga
ggcggccgcggcggaggccggggccgcggcagggccggctcccagggcggccgcggcggc
ggggcgcaggccgccgcgcgagtgaaccgaggcggcgggcccatccggaaccggccggcc
atcgctcgaggcgcggcgggcggcggcggcaggaaccggccggcgccctacagcaggccg
aaacaacttcccgacaagtggcaacacgaccttttcgacagcggtttcgggggcggcgca
ggcgtcgagacgggtgggaaactgctggtgtcaaatctggattttggagtatcggacgcc
gatattcaggagctcttcgctgagttcggaactctgaagaaggcggccgtacactacgat
cgctcagggcgcagtttaggaacagccgacgtgcactttgaacggaaggcagatgccctg
aaagcgatgaagcagtacaacggcgtccccctggatggccgccccatgaacattcagctc
gtcacgtcacagattgacacacagcggagacccgcacagagcgtaaacagaggcgggatg
accagaaaccgcggttccggaggcttcgggggcggtggcggcacccggagaggcgctcgc
ggaggaagccggggcaggggcagaggcaccggcaggagttcgaagcagcagctctccgcc
gaggagttggacgcccagctggacgcttataacgccagaatggacaccagttaa
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