Prionailurus bengalensis (leopard cat): 122486092
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Entry
122486092 CDS
T07574
Symbol
COL1A1
Name
(RefSeq) collagen alpha-1(I) chain isoform X1
KO
K06236
collagen type I alpha
Organism
pbg
Prionailurus bengalensis (leopard cat)
Pathway
pbg04151
PI3K-Akt signaling pathway
pbg04510
Focal adhesion
pbg04512
ECM-receptor interaction
pbg04611
Platelet activation
pbg04820
Cytoskeleton in muscle cells
pbg04926
Relaxin signaling pathway
pbg04933
AGE-RAGE signaling pathway in diabetic complications
pbg04974
Protein digestion and absorption
pbg05146
Amoebiasis
pbg05165
Human papillomavirus infection
pbg05205
Proteoglycans in cancer
pbg05415
Diabetic cardiomyopathy
Brite
KEGG Orthology (KO) [BR:
pbg00001
]
09130 Environmental Information Processing
09132 Signal transduction
04151 PI3K-Akt signaling pathway
122486092 (COL1A1)
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
122486092 (COL1A1)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
122486092 (COL1A1)
09142 Cell motility
04820 Cytoskeleton in muscle cells
122486092 (COL1A1)
09150 Organismal Systems
09151 Immune system
04611 Platelet activation
122486092 (COL1A1)
09152 Endocrine system
04926 Relaxin signaling pathway
122486092 (COL1A1)
09154 Digestive system
04974 Protein digestion and absorption
122486092 (COL1A1)
09160 Human Diseases
09161 Cancer: overview
05205 Proteoglycans in cancer
122486092 (COL1A1)
09172 Infectious disease: viral
05165 Human papillomavirus infection
122486092 (COL1A1)
09174 Infectious disease: parasitic
05146 Amoebiasis
122486092 (COL1A1)
09166 Cardiovascular disease
05415 Diabetic cardiomyopathy
122486092 (COL1A1)
09167 Endocrine and metabolic disease
04933 AGE-RAGE signaling pathway in diabetic complications
122486092 (COL1A1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
pbg00536
]
122486092 (COL1A1)
Glycosaminoglycan binding proteins [BR:
pbg00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
122486092 (COL1A1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Collagen
COLFI
VWC
Motif
Other DBs
NCBI-GeneID:
122486092
NCBI-ProteinID:
XP_043441522
LinkDB
All DBs
Position
E1:35130443..35148096
Genome browser
AA seq
1490 aa
AA seq
DB search
MFSFVDLRLLLLLAATALLTHGQEEGQEEEDIPPVTCVQNGLRYYDRDVWKPEACRICVC
DNGNVLCDDVICDETKNCPGAHVPPGECCPVCPDGEASPTGQETTGVEGPKGDTGPRGPR
VSVALSAVGAGGGRGSMPALTAARPLPLQGPAGPPGRDGIPGQPGLPGPPGPPGPPGPPG
LGGNFAPQMSYGYDEKSTGGISVPGPMGPSGPRGLPGPPGAPGPQGFQGPPGEPGEPGAS
GPMGPRGPPGPPGKNGDDGEAGKPGRPGERGPPGPQGARGLPGTAGLPGMKGHRGFSGLD
GAKGDAGPAGPKGEPGSPGENGAPGQMGPRGLPGERGRPGAPGPAGARGNDGATGAAGPP
GPTGPAGPPGFPGAVGAKGEAGPQGARGSEGPQGVRGEPGPPGPAGAAGPAGNPGADGQP
GAKGANGAPGIAGAPGFPGARGPSGPQGPSGPPGPKGNSGEPGAPGNKGDTGAKGEPGPT
GIQGPPGPAGEEGKRGARGEPGPTGLPGPPGERGGPGSRGFPGADGVAGPKGPAGERGSP
GPAGPKGSPGEAGRPGEAGLPGAKGLTGSPGSPGPDGKTGPPGPAGQDGRPGPPGPPGAR
GQAGVMGFPGPKGAAGEPGKAGERGVPGPPGAVGPAGKDGEAGAQGPPGPAGPAGERGEQ
GPAGSPGFQGLPGPAGPPGEAGKPGEQGVPGDLGAPGPSGARGERGFPGERGVQGPPGPA
GPRGANGAPGNDGAKGDAGAPGAPGSQGAPGLQGMPGERGAAGLPGPKGDRGDAGPKGAD
GSPGKDGVRGLTGPIGPPGPAGAPGDKGEAGPSGPAGPTGARGAPGDRGEPGPPGPAGFA
GPPGADGQPGAKGEPGDAGAKGDAGPPGPAGPTGPPGPIGNVGAPGPKGARGSAGPPGAT
GFPGAAGRVGPPGPSGNAGPPGPPGPVGKEGGKGPRGETGPAGRPGEVGPPGPPGPAGEK
GSPGADGPAGAPGTPGPQGIAGQRGVVGLPGQRGERGFPGLPGPSGEPGKQGPSGPSGER
GPPGPMGPPGLAGPPGESGREGSPGAEGSPGRDGSPGPKGDRGETGPAGPPGAPGAPGAP
GPVGPAGKNGDRGETGPAGPAGPIGPVGARGPAGPQGPRGDKGETGEQGDRGIKGHRGFS
GLQGPPGPPGSPGEQGPSGASGPAGPRGPPGAAGSPGKDGLNGLPGPIGPPGPRGRTGDA
GPVGPPGPPGPPGPPGPPSGGFDFSFLPQPPQEKAHDGGRYYRADDANVVRDRDLEVDTT
LKSLSQQIENIRSPEGSRKNPARTCRDLKMCHSDWKSGEYWIDPNQGCNLDAIKVFCNME
TGETCVYPTQPHVAQKNWYISKNPKDKRHVWYGESMTDGFQFEYGGQGSDPADVAIQLTF
LRLMSTEASQNITYHCKNSVAYMDQQTGNLKKALLLQGSNEIEIRAEGNSRFTYSVTYDG
CTSHTGNWGKTVIEYKTTKTSRLPIIDVAPLDVGAPDQEFGIDIGPACFL
NT seq
4473 nt
NT seq
+upstream
nt +downstream
nt
atgttcagctttgtggacctccggctcctgctcctcttagcggccaccgccctcctgacg
cacggccaagaggagggccaagaagaagaagacatcccaccagtcacctgcgtacagaac
ggcctcaggtactatgaccgagatgtttggaaacccgaggcctgccggatctgtgtctgc
gacaacggcaacgtgttgtgcgatgacgtgatctgcgacgaaaccaagaactgccccggc
gctcatgtccccccgggcgagtgctgccccgtctgccccgacggcgaggcgtcacctacc
ggccaagaaaccacaggagtcgagggacccaaaggagacactggcccccgaggcccaagg
gtaagcgttgcgctctctgctgtcggggctggaggtgggcgtggctccatgcctgcgctc
accgccgcccgccctctcccgctgcagggacctgccggcccccctggccgcgacggcatc
cctggacagcctggacttcctggaccccccggccctcccggaccccccggaccccctggc
ctcggcggaaactttgctccccaaatgtcttacggctacgatgagaagtcaactggagga
atctctgtgcctggccccatgggtccttctggtcctcgtggtctccctggtccccctggc
gcacctggtccccaaggtttccaaggcccccctggtgagcccggcgagcctggagcttca
ggtcccatgggtccccgtggtccccctggtccccctggcaagaacggagatgacggtgaa
gctggaaagcctggtcgtcctggtgagcgtgggcctcctggacctcagggcgcccgggga
ttgcctggaactgctggccttcctggaatgaagggacacagaggtttcagtggtttggat
ggtgccaagggagacgctggtcctgctggtcccaagggcgagcctggtagccccggtgaa
aatggagctcctggccagatgggtccccgtggtctgcctggtgagagaggacgccccgga
gcccctggccctgctggtgctcgtggaaatgacggtgctaccggtgccgccggcccccct
ggtcccactggccccgctggtcctcccggcttccctggtgctgttggtgctaagggtgaa
gctggtccccaaggagcccgtggctctgaaggtccccagggtgtgcgtggcgagcccggc
ccccctggccctgctggtgctgctggccctgctggaaaccccggtgctgacggacagcct
ggtgccaaaggtgccaacggcgctcctgggattgctggtgctcctggcttccctggtgct
cgaggcccctctggaccccagggccccagcggccctcccggtcccaagggtaacagtggc
gaacctggtgcccccggcaacaaaggagacactggcgccaagggagagcccggccccact
ggtatccaaggcccccctggccccgctggggaagaaggaaagcgaggagcccgaggcgaa
cccggccccactggcctgcccggaccccctggcgagcgcggtggacccggtagccgtggc
ttccctggcgcagatggtgtggctggtcccaagggtcccgctggtgaacgtggttctcct
ggccctgctggccccaaaggttctcctggtgaagctggtcgccccggtgaagctggtctg
cctggtgccaagggtctgaccggaagccccggcagccccggtccggatggcaaaactggt
ccccctggtcccgctggtcaagatggtcgccccggacccccaggcccccccggtgcccgt
ggtcaggctggtgtgatgggattccccgggcctaaaggtgctgctggagagcctggcaaa
gcaggagaacgaggtgtccctgggccccctggcgctgttggtcctgctggcaaagatgga
gaagctggagctcagggaccccccggccctgccggccctgctggtgagagaggcgaacag
ggccctgctggctctcccggattccagggtcttcctggccctgcgggtcctcccggtgaa
gcaggcaaacctggcgaacagggtgttcctggagatcttggtgcccccggcccctctgga
gccagaggcgagagaggtttccctggtgaacgcggtgtgcaaggtccccccggtcctgcc
ggtcctcggggagccaacggtgcccctggcaatgatggtgctaagggtgatgctggtgcc
cccggagcccccggtagccagggtgctcctggccttcagggaatgcctggtgaacgaggt
gcagctggccttcctggccctaagggtgacagaggcgatgccggtcccaaaggtgctgat
ggttctcctggcaaagatggtgtccgtggcctgactggccccattggtcctcctggcccc
gctggtgcccccggtgacaagggtgaagctggtcccagcggccccgctggtcccactgga
gctcgtggcgcccccggagaccgtggtgagcctggtccccccggccctgctggcttcgct
ggcccccctggtgctgatggccaacctggtgctaaaggcgagcccggagatgctggtgct
aaaggcgatgctggtccccctggtcccgctggccccactggaccccccggccccatcggc
aacgttggtgctcctggacccaaaggtgctcgaggcagtgccggtccccctggtgctact
ggtttccctggtgctgctggccgagtcggtcctcccggcccctctggaaacgctggaccc
cctggccctcccggccctgtcggcaaagaaggcggcaaaggcccccgcggtgagactggc
cccgctgggcgtcccggggaagtcggtccccctggtccccccggccctgccggtgagaaa
ggatctcctggtgctgacggacctgctggtgctcccggcactcccggacctcaaggcatt
gctggacagcgtggtgtggttggcctgcccggtcagcgaggagaaagaggcttccctggt
cttcccggcccctctggtgaacctggaaaacaaggtccttcaggaccaagtggtgaacgt
ggcccccctggtcccatgggcccccctggattggctggaccccctggcgagtctggacgt
gagggatctcctggtgctgaaggctcccctggacgagatggttctcccggccccaagggt
gaccgtggtgagaccggccctgctggcccccctggtgctcctggcgctcctggtgcccct
ggtcccgtcggccctgctggcaagaatggcgaccgtggtgagactggtcccgctggtccc
gccggtcccatcggccccgtcggtgctcgtggtcccgctggaccccaaggcccccgtggt
gacaagggtgagacaggcgaacagggtgacagaggcataaagggtcaccgtggcttctcc
ggtctccagggtccccctggccctcccggctctcctggtgaacaaggtccttccggagct
tctggtcctgctggtccccgaggtccccccggcgctgctggctctcctggcaaggacgga
ctcaacggtctcccaggccccatcggcccccctggtcctcgtggtcgcactggtgatgct
ggccctgttggtccccccggccctcctggaccccccggtcctcccggtcctcccagcggt
ggtttcgacttcagcttcctgccccagccacctcaagagaaggctcacgatggcggccgc
tattaccgggccgatgatgccaacgtggtccgtgaccgtgacctcgaggtggacaccacc
ctcaagagcctgagccagcagatcgagaacatccggagccccgaaggcagccgcaagaac
cctgcccgcacctgccgcgacctcaagatgtgccactctgactggaagagcggagaatac
tggatcgatcccaaccaaggctgcaacctggatgccatcaaggtcttctgcaacatggag
acaggtgagacctgcgtgtaccccactcagccccacgtggctcagaagaactggtacatc
agcaagaaccccaaggacaagaggcacgtctggtatggcgagagcatgaccgacggattc
cagttcgagtatggtggccagggctccgatcccgccgatgtggccatccagctgactttc
ctgcgcctgatgtccaccgaggcgtcccagaacatcacctaccactgcaagaacagcgtg
gcctacatggaccagcagactggcaacctcaagaaggccctgctcctccagggctccaac
gagatcgagatccgggccgagggcaacagccgcttcacctacagcgtcacctacgacggc
tgcacgagtcacaccggaaactggggcaagacagtgatcgaatacaaaaccaccaagacc
tcccgcttgcccatcatcgatgtggccccattggacgttggcgccccagaccaggaattc
ggcatcgacattggccctgcctgcttcctgtaa
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