Prionailurus bengalensis (leopard cat): 122486882
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Entry
122486882 CDS
T07574
Symbol
SMARCA4
Name
(RefSeq) transcription activator BRG1 isoform X1
KO
K11647
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 2/4 [EC:5.6.2.-]
Organism
pbg
Prionailurus bengalensis (leopard cat)
Pathway
pbg03082
ATP-dependent chromatin remodeling
pbg04714
Thermogenesis
pbg05225
Hepatocellular carcinoma
Brite
KEGG Orthology (KO) [BR:
pbg00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
122486882 (SMARCA4)
09150 Organismal Systems
09159 Environmental adaptation
04714 Thermogenesis
122486882 (SMARCA4)
09160 Human Diseases
09162 Cancer: specific types
05225 Hepatocellular carcinoma
122486882 (SMARCA4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pbg03021
]
122486882 (SMARCA4)
03036 Chromosome and associated proteins [BR:
pbg03036
]
122486882 (SMARCA4)
Transcription machinery [BR:
pbg03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
122486882 (SMARCA4)
Chromosome and associated proteins [BR:
pbg03036
]
Eukaryotic type
Histone modification proteins
HDAC complexes
REST complex
122486882 (SMARCA4)
Chromatin remodeling factors
BAF complex
122486882 (SMARCA4)
PBAF complex
122486882 (SMARCA4)
GBAF(ncBAF) complex
122486882 (SMARCA4)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
SnAC
Bromodomain
HSA
BRK
QLQ
ResIII
HDA2-3
DEAD
DUF2009
Htt_C-HEAT
Motif
Other DBs
NCBI-GeneID:
122486882
NCBI-ProteinID:
XP_043442491
LinkDB
All DBs
Position
A2:8311128..8401997
Genome browser
AA seq
1650 aa
AA seq
DB search
MSTPDPPLGGTPRPGPSPGPGPSPGAMLGPSPGPSPGSAHSMMGPSPGPPSAGHPIPTQG
PGGYPQDNMHQMHKPMESMHEKGMSDDPRYNQMKGMGMRSGAHAGMGPPPSPMDQHSQGY
PSPLGGSEHASSPVPASGPSSGPQMSSGPGGAPLDGADPQALGQQNRGPTPFNQNQLHQL
RAQIMAYKMLARGQPLPDHLQMAVQGKRPMPGMQQQMPTLPPPSVSATGPGPGPGPGPGP
GPGPAPPNYSRPHGMGGPNMPPPGPSGVPPGMPGQPPGGPPKPWPEGPMANAAAPTSTPQ
KLIPPQPTGRPSPAPPAVPPAASPVMPPQTQSPGQPAQPAPMVPLHQKQSRITPIQKPRG
LDPVEILQEREYRLQARIAHRIQELENLPGSLAGDLRTKATIELKALRLLNFQRQLRQEV
VVCMRRDTALETALNAKAYKRSKRQSLREARITEKLEKQQKIEQERKRRQKHQEYLNSIL
QHAKDFKEYHRSVTGKIQKLTKAVATYHANTEREQKKENERIEKERMRRLMAEDEEGYRK
LIDQKKDKRLAYLLQQTDEYVANLTELVRQHKAAQVAKEKKKKKKKKKAENAEGQTPAIG
PDGEPLDETSQMSDLPVKVIHVESGKILTGTDAPKAGQLEAWLEMNPGYEVAPRSDSEES
GSEEEEEEEEEEQPQPAQPPTLPVEEKKKIPDPDSDDVSEVDARHIIENAKQDVDDEYGV
SQALARGLQSYYAVAHAVTERVDKQSALMVNGVLKQYQIKGLEWLVSLYNNNLNGILADE
MGLGKTIQTIALITYLMEHKRINGPFLIIVPLSTLSNWAYEFDKWAPSVVKVSYKGSPAA
RRAFVPQLRSGKFNVLLTTYEYIIKDKHILAKIRWKYMIVDEGHRMKNHHCKLTQVLNTH
YVAPRRLLLTGTPLQNKLPELWALLNFLLPTIFKSCSTFEQWFNAPFAMTGEKVDLNEEE
TILIIRRLHKVLRPFLLRRLKKEVEAQLPEKVEYVIKCDMSALQRVLYRHMQAKGVLLTD
GSEKDKKGKGGTKTLMNTIMQLRKICNHPYMFQHIEESFSEHLGFTGGIVQGLDLYRASG
KFELLDRILPKLRATNHKVLLFCQMTSLMTIMEDYFAYRGFKYLRLDGTTKAEDRGMLLK
TFNEPGSEYFIFLLSTRAGGLGLNLQSADTVIIFDSDWNPHQDLQAQDRAHRIGQQNEVR
VLRLCTVNSVEEKILAAAKYKLNVDQKVIQAGMFDQKSSSHERRAFLQAILEHEEQDESR
HCSTGSGSASFAHTAPPPAGVNPDLEEPPLKEEDEVPDDETVNQMIARHEEEFDLFMRMD
LDRRREEARNPKRKPRLMEEDELPSWIIKDDAEVERLTCEEEEEKMFGRGSRHRKEVDYS
DSLTEKQWLKTLKAIEEGTLEEIEEEVRQKKSSRKRKRDGDAGSSTPTTSTRSRDKDDDS
KKQKKRGRPPAEKLSPNPPNLTKKMKKIVDAVIKYKDSSSGRQLSEVFIQLPSRKELPEY
YELIRKPVDFKKIKERIRNHKYRSLNDLEKDVMLLCQNAQTFNLEGSLIYEDSIVLQSVF
TSVRQKIEKEDDSEGEESEEEEEGEEEGSESESRSVKVKIKLGRKEKAQDRLKGGRRRPS
RGSRAKPVVSDDDSEEEQEEDRSGSGSEED
NT seq
4953 nt
NT seq
+upstream
nt +downstream
nt
atgtccactccagacccaccgctgggcggaactcctcggccaggcccttccccgggcccg
ggcccctcccctggagccatgttgggccctagcccaggcccctcgccgggctctgcccac
agcatgatggggcccagtccggggcctccctcagcaggacaccccatcccgacccagggg
cctggagggtaccctcaggacaacatgcatcagatgcacaagccaatggagtccatgcac
gagaagggcatgtcggatgatccccgctacaaccagatgaagggaatggggatgcggtcg
ggggcccacgcagggatggggcccccgccaagccccatggaccagcactcccaaggttac
ccctcccctctgggtggctccgagcacgcctccagtccggttccagccagcggcccatcc
tcaggcccacagatgtcgtctgggccaggaggggccccgctggacggcgccgatccccag
gctttgggacagcagaaccggggcccgactccgtttaaccagaaccagctgcatcagctc
agagcccagatcatggcctacaagatgctggccaggggccagcccctccccgaccacctg
cagatggcggtgcaggggaagcggccgatgcctgggatgcagcagcagatgccaacgcta
cctccaccctctgtgtccgcaacgggacccggccccggccccggccccggccccgggcca
ggtccgggaccagcacctccaaattacagccggcctcacggtatgggagggcccaacatg
ccccccccaggaccctcaggtgtgccccctgggatgccaggtcagccccccggagggcct
cccaagccttggcctgaaggacccatggcgaatgctgctgcccccacgagcacacctcag
aagctgatccccccacagcccacgggccgcccctcaccagcgccccctgccgtcccgccc
gccgcctccccggtgatgccgccccagacacagtcgccggggcagcctgcccagcctgcc
cccatggtgcctttgcaccagaagcagagccgcatcacccccattcagaagccgcggggc
ctggaccctgtggagatcctgcaggagcgggagtacaggctgcaggctcgaatcgcacac
cgaattcaggaacttgaaaaccttcccgggtccctggccggggatttgcgaaccaaagcg
accattgagctcaaggccctcaggctgctgaacttccagaggcagctgcgacaggaggtg
gtggtgtgcatgaggagggacaccgccctcgagacggccctcaatgccaaggcctacaag
cgcagcaagcggcagtccctgcgcgaggcccgcatcaccgagaagctggagaagcagcag
aagatcgagcaggagcgcaagcgccggcagaagcaccaggaatacctcaacagcattctg
cagcatgccaaggatttcaaagaatatcacagatcggtcacaggcaaaatccagaaactc
acgaaggctgtggccacataccacgccaacacggagagggaacagaagaaggaaaacgaa
aggattgagaaagagagaatgcggaggctcatggctgaagatgaggagggctaccgcaag
ctcatcgaccagaaaaaggacaaacgcctggcctacctcttgcagcagacagacgagtac
gtggcgaacctcacagagctggtgcggcagcacaaggctgcccaggtcgccaaggagaaa
aagaagaaaaagaaaaagaagaaggcagaaaacgcagaaggacagacgcctgcaatcgga
cctgatggcgagcctctggatgagaccagccaaatgagtgacctcccggtgaaagttatc
cacgtcgagagcgggaagatcctcacgggcacagatgcccccaaagcagggcagctagag
gcctggcttgagatgaaccccgggtatgaagtagctccaagatctgatagtgaagaaagt
ggctcagaagaagaggaggaggaggaggaagaggaacagccgcagccagcacagcctccc
accctgcctgttgaggagaagaagaagattccagatccagacagcgatgacgtctcggag
gtagacgcccggcacatcattgagaatgccaagcaagatgttgatgacgagtacggtgtg
tcccaggccctggcacggggcctgcagtcctattacgccgtggcccatgctgtcaccgag
agagtggataagcagtcggcgctcatggtcaatggtgtccttaaacagtaccagatcaaa
ggcctggagtggctggtgtctctgtacaacaacaatctgaatggcatcctggctgatgag
atgggcctggggaagaccatccagaccatcgccctcatcacgtacctcatggagcacaag
cggatcaatgggccctttctcatcatagtacctctctccacattgtcaaactgggcatac
gaatttgacaagtgggccccctccgtggtgaaggtgtcctacaagggttctccagcagcc
aggcgtgctttcgtcccccagctccgaagtggcaagttcaacgtcttgctgacaacttac
gagtacatcattaaagacaagcacatccttgcaaagatccgttggaagtacatgatcgtc
gatgaaggccaccgcatgaagaaccaccactgcaagctgacgcaggtcctcaacacgcac
tacgtggccccccgccgcctgctgctgacgggcacgccgctgcagaacaaactgcccgag
ctctgggcgctcctcaacttcctgctgcccaccatcttcaagagctgcagcaccttcgag
cagtggttcaacgcgccctttgccatgactggggaaaaggtggacctgaacgaggaggaa
accattctcatcatccgtcgtctccacaaagtgctgcggcccttcctgctccggcggctc
aagaaggaagtcgaggcccagttgcctgaaaaggtggaatatgtcatcaagtgtgacatg
tctgcgctccagcgtgtgctctaccggcacatgcaggccaaaggggtactgctcaccgac
ggctccgagaaggacaagaagggcaaaggtggcaccaagaccctgatgaacaccatcatg
cagctcaggaagatctgcaaccacccgtacatgttccagcacatcgaggagtccttctcc
gagcacttggggtttaccggtggcatcgtgcaagggctggacctgtaccgcgcctcgggg
aagtttgagcttcttgataggattcttcccaaactccgtgccaccaaccacaaagtgctg
ctgttctgtcagatgacctccctcatgacgatcatggaagattattttgcgtatcgcggc
tttaaatacctcaggctcgacggaacgacgaaagcggaggaccggggcatgctgctgaaa
accttcaacgagccgggctccgagtacttcatcttcctgctcagcacgcgggccgggggc
ctcgggctgaacctccagtcagctgacactgtgatcattttcgacagtgactggaaccct
caccaggacctgcaagcccaggaccgcgcccaccgcatcgggcagcagaacgaggtgcga
gtgctccgtctctgcacggtcaacagcgtggaggagaagattctggccgcagccaaatac
aagctcaatgtcgaccagaaggtgatccaggccggcatgtttgaccagaagtcctccagc
catgagaggcgcgccttcctgcaggccatcctggagcacgaggagcaggacgagagcaga
cactgcagcacgggcagcggcagtgccagcttcgcccacactgcccctccgccagcgggc
gtcaaccccgacctggaggagccacctctaaaggaagaagacgaggtgcccgacgacgag
acggtgaaccagatgattgcccggcacgaggaggagtttgacctgttcatgcgcatggac
ctggaccgcaggcgcgaggaggcccgaaaccccaagcggaagccgcgtctgatggaggag
gatgagctcccctcgtggatcatcaaggacgatgccgaggtagagcgtctgacctgcgag
gaggaagaggagaaaatgtttggccgaggctcccgccaccgcaaggaggtggactacagc
gactcgctgaccgagaagcagtggctcaagaccctgaaggccatcgaggagggcacgctg
gaggagatcgaagaggaggtccggcagaagaaatcctctcggaagcgcaagcgggacggc
gacgccggctcctccaccccgaccaccagcacccgcagccgcgacaaggacgatgacagc
aagaagcagaagaagcgcgggcggccacccgccgagaagctctcccccaaccctcccaac
ctcaccaagaagatgaagaagatcgtggatgccgtgatcaagtacaaggacagtagtagt
ggacgtcagctcagcgaggtgttcatccagctgccgtcccgcaaggaactgcccgagtac
tatgagctcatccgcaagcctgtggacttcaagaagataaaggagcgcatccgcaaccac
aagtatcgcagcctcaatgacctggagaaggacgtcatgctgctgtgccagaacgctcag
accttcaacctggagggctccctgatctacgaagattccatcgtcctacagtcggtgttc
accagtgtgcgacagaaaattgaaaaagaggacgacagtgagggcgaggagagcgaggag
gaggaggagggcgaggaggaaggctccgagtctgagtcccgctctgtcaaagtgaagatc
aagctcggccggaaggagaaggcacaggataggctgaaggggggccgacggcgaccgagc
cgcggatcccgggccaagccggtggtgagcgatgatgacagtgaagaggagcaggaggag
gaccgctcaggaagtggcagcgaggaagactga
DBGET
integrated database retrieval system
