Prionailurus bengalensis (leopard cat): 122487053
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Entry
122487053 CDS
T07574
Symbol
USHBP1
Name
(RefSeq) LOW QUALITY PROTEIN: Usher syndrome type-1C protein-binding protein 1
KO
K21881
Usher syndrome type-1C protein-binding protein 1
Organism
pbg
Prionailurus bengalensis (leopard cat)
Brite
KEGG Orthology (KO) [BR:
pbg00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
pbg03037
]
122487053 (USHBP1)
Cilium and associated proteins [BR:
pbg03037
]
Primary cilia and associated proteins
USH complex and associated proteins
122487053 (USHBP1)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
USHBP1_PDZ-bd
DASH_Dam1
HALZ
NTR2
NET2A
Motif
Other DBs
NCBI-GeneID:
122487053
NCBI-ProteinID:
XP_043442867
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Position
A2:complement(13021914..13031419)
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AA seq
703 aa
AA seq
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MSARATRPRSRRGRHAPPGELDPVAESSEEAEAAGGSSEPGPVPSQESFKPKLLGPEAEA
RGQGLGGRPTKEAEENSNRGPAPSLKGPHGPAEEGHQATDVAPRPGELVPPRPGASDVFQ
ILQHALSSLEAAAAAWHRRPPSCPGPVEAEDRSEAGPKPCLEEEGAGACQREAARLAERN
AWLRLALGSREEELIRVQASVQAIQAEKETLQREVQELQDSLMRLEPFPLPSRGQAGGSG
SGSSSSGVDEEPWGTQDPFSLAHPLLRRLRSDSSTQMFGPLRTQPLAPEVRIMESQMEQL
QGSIEKLKCFNHLLSAVLQGYKGRCEALSMQLGQREAEATALRLALQYSEHCEEAYGVLL
TLREADSGAREEAPMRDLEVAEKEAQRLLAHEEAAMDGGAPRNPQPSPEGSSVDRPTPQE
LATQLWGYVQRLQERRALVKIPPEPGPTLAPMPAVPHAEAMVQAILGTQPGPVLPRLEKM
QIQRDLAATRETLAELMLRLQLMRREKRGLELKEAALRAQGPAHVLLLEQLRWEQAQLRT
GGANSSGGDSSGGGSSGDEEESSQGPPAVLGGSRGIDGGQAGKAQGPEILAQELAASLHR
ALSLREQLQSLREELEQVAQKGRARRAQSAELNNDLCKAHSALVLAFRGAHRKQEEQRRK
LEQQVALMEVRQAEELEVLEATVRALGRPRPSCPPPRLGETFL
NT seq
2113 nt
NT seq
+upstream
nt +downstream
nt
atgagtgcccgggccacacgaccccgaagccggcgagggaggcacgctccacctggggag
ctggatcctgtggcagagagttcagaggaggccgaggcagccggcgggagttcggagccg
ggccctgtgccatctcaggagagcttcaagccaaagctgctggggccagaggcagaggcc
agggggcagggcttggggggcaggcccaccaaagaggctgaagagaactctaacagagga
ccggccccatctctcaagggaccccatgggcctgcagaggaaggccaccaggccacagat
gtagccccacggcccggggagctggtcccccccaggcctggagcctctgatgtgttttca
gattctccagcatgccctgagctcgctggaggctgctgccgcggcctggcaccgccggcc
cccaagctgtcctgggcctgtggaggcagaggacagaagtgaggcaggaccaaagccctg
cttggaggaggagggggcaggggcttgccagagggaggcagcccgcctggcagagaggaa
tgcctggctgcgattggccctgggcagccgagaagaggagctgattcgcgtgcaggcctc
cgtgcaggccatccaggctgaaaaggagacgttgcagagggaggtccaggagctccagga
ttccctgatgaggttggagccctttccacttccctcccgtggccaagcaggtggctcggg
cagtggctccagcagttctggggtagatgaagagccctgggggactcaggaccccttctc
cctggctcaccccctgctccggcgcctccggagtgattccagcactcagatgtttgggcc
tctccgcactcaacccctcgcccccgaggtgcgcatcatggaaagccagatggaacagct
ccaggggagcatcgagaagctcaagtgtttcaaccatctgctgtcagctgtgctgcaggg
gtacaagggccggtgtgaagccctcagcatgcagctgggccagcgggaggctgaagccac
agccctgcgtctggccttgcagtacagtgagcactgtgaggaggcgtatggagtcctgct
cactctccgggaggcagattcaggagcaagagaggaagcccctatgagggacctggaggt
ggctgagaaggaggcgcagaggctgctggcacacgaggaggctgccatggatggaggggc
accacggaatccacagccaagccctgagggcagcagtgtggatcggcccacaccacagga
gctggctacccagctctggggctatgtccagcgtctccaggagcgccgtgctctggtgaa
gattcccccagagcctggcccaaccttggcacccatgcccgctgtgccccatgcggaggc
catggtgcaggccattctggggacccagcctggcccagtcctaccccggttggagaagat
gcagatccagcgggacctggcggccacacgggagactctggcagaactgatgctgcggct
acagttgatgaggcgggagaagcggggtctggagctgaaggaggctgccctccgggccca
gggcccagcccatgtgctcctgctagagcagctgcggtgggaacaggcacagctccggac
cggtggggccaacagtagtggtggggacagcagtggaggcgggagcagtggagacgaaga
ggagtcgtctcagggccctccagccgttcttggtggcagcaggggcattgatggaggcca
ggcgggcaaagcgcagggcccagagattctagcccaggaactagcagcgtcacttcaccg
ggccctgagcctgcgggagcagctgcagtctctgcgggaggaactggaacaggtggctca
gaaggggcgagccagacgtgctcagagtgcggagctgaacaacgatttatgcaaggctca
cagtgccctggtcctggccttccgaggtgcccaccggaagcaggaagagcagcggaggaa
gctggaacagcaggtggcactaatggaggttcgacaggcagaggaattggaagtgctaga
agccaccgtaagggcgctggggaggcccagaccgtcttgtccacctccccggctgggaga
gacctttctgtag
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