Prionailurus bengalensis (leopard cat): 122487443
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Entry
122487443 CDS
T07574
Symbol
PDZRN3
Name
(RefSeq) E3 ubiquitin-protein ligase PDZRN3 isoform X1
KO
K15682
ligand of Numb protein X 3/4 [EC:
2.3.2.27
]
Organism
pbg
Prionailurus bengalensis (leopard cat)
Brite
KEGG Orthology (KO) [BR:
pbg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
pbg04121
]
122487443 (PDZRN3)
Enzymes [BR:
pbg01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
122487443 (PDZRN3)
Ubiquitin system [BR:
pbg04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Ligand of Numb proteins
122487443 (PDZRN3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PDZ
PDZ_6
PDZ_2
zf-C3HC4_2
zf-RING_2
zf-C3HC4
zf-RING_UBOX
zf-C3HC4_3
Sina_ZnF
zf-TRAF
zf-C3HC4_4
zf-RING_5
TRAF3_RING
Prok-RING_4
PDZ_Tricorn
zf-rbx1
CEP104_ZnF
JmjN
zf-RING_10
Motif
Other DBs
NCBI-GeneID:
122487443
NCBI-ProteinID:
XP_043443878
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All DBs
Position
A2:complement(40431234..40671741)
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AA seq
1063 aa
AA seq
DB search
MGFELDRFDGDVDPDLKCALCHKVLEDPLTTPCGHVFCAGCVLPWVVQEGSCPARCRGRL
SAKELNHVLPLKRLILKLDIKCAHAARGCGRVVKLQQLPEHLERCDFAPARCRHAGCGQV
LLRRDVEAHMRDACDARPVGRCQEGCGLPLTHGEQRAGGHCCARALRAHNSALQARLGAL
HKALKKEALRAGKREKSLVAQLAAAQLELQMTALRYQKKFTEYSARLDSLSRCVAAPPGG
KGEETKSLTLVLHRDSGSLGFNIIGGRPCVDNQDGSSTEGIFVSKIVDSGPAAKDGGLQI
HDRIIEVNGKDLSRATHDQAVEAFKTAKEPIVVQVLRRTPRTKMFTPPSESQLVDTGTQT
DITFEHIMALTKMSSPTPPVLDPYLLPEEHPSAHEYYDPNDYIGSIHQDMDREELELEEV
DLYRMNSQDKLGLTVCYRTDDEEDIGIYISEIDPNSIAAKDGRIREGDRIIQINGIEVQN
REEAVALLTSEENKNFSLLIARPELQLDEGWMDDDRNDFLDHLHMDMLEEQHQQAMQFTA
SMLQQKKHEEDGGTTDTATILSNQHEKDSGVGRTDESTRNDESSEQENNVDDATASSTPL
AGQRKLTCSQDTLGSGDLPFSNESFLSADCADTDYLGIPVDECERFRELLELKCQAKNSN
PYSLYYASSPLDASKSDPESVDKELELLNEELRSIELECLSIVRAHKMQQLREQYRESWM
LHNSGFRNYNTSIDVRRHELSDITELPEKSDKDSSSAYNTGESCRSTPLTLEMSPDNSLR
RVAEGSSEGAVGTTEAYGPSPKNLLAITEDPEVGSASYSPPPPQELGTSQAPESRERRPS
DDSGSPSPGPKLAGSYLSPFPHSPYKHAHIPAHAQHYQSYMQLIQQKSAVEYAQSQMSLV
SMCKDLNSAGQAEARMEWKVKVRSDGTRYITKRPVRDRLLRERALKIREERSGMTTDDDA
VSELKLGRYWSKEERKQHVVKAKEQRRRREFMMQSRLDCLKEQQAADDRKEMNILELSHK
KMMKKRNKKIFDNWMTIQELLTHGTKSPDGTRVYNSFLSVTTV
NT seq
3192 nt
NT seq
+upstream
nt +downstream
nt
atgggcttcgagctggaccgcttcgacggcgacgtggacccggacctgaagtgcgcgctg
tgccacaaggtcctggaggacccgctgaccacgccgtgcggccacgtcttctgcgccggc
tgcgtgttgccctgggtggtgcaggagggcagctgcccggcgcgctgccgcggtcgcctg
tcggccaaggagctcaaccacgtcttgccgctcaagcgcctcatcctcaagctggacatc
aagtgcgcgcacgcggcgcgaggctgcggccgggtggtcaagctgcagcagctgccagag
cacctcgagcgctgcgacttcgcgcccgcgcgctgccgccacgcgggctgcggccaggtg
ctgctgcggcgcgacgtggaggcgcacatgcgcgacgcgtgcgacgcgcggccggtgggc
cgctgccaggagggctgcgggctgcccctgacgcacggcgagcagcgcgcgggcggccac
tgctgcgccagggccctgcgggcgcataacagcgcgctgcaggcccgcctgggcgcgctg
cacaaggcgctcaagaaggaggcgctgcgcgccggcaagcgcgagaagtcgctggtggcg
cagctggccgcggcgcagctggagctgcagatgaccgcactgcgctaccaaaagaagttc
acggagtacagcgcgcgcctcgactcgctcagccgctgcgtggccgcgccgcccggcggc
aagggagaagaaaccaaaagtctgactcttgtcctacatcgagactctggctccctggga
ttcaatattatcggtggccggccttgtgtggacaaccaagatggatcgtccactgaagga
atctttgtatccaaaatagttgacagtgggcccgcagccaaggacggaggcctgcaaatt
catgacaggattattgaggtcaacggcaaagacttatccagagcaactcatgaccaggct
gtggaagctttcaagacggccaaagagcccattgtggtacaggtgttgaggagaacccca
cggaccaaaatgttcacgcctccatccgagtcgcagctggtggacacaggaactcagacc
gacatcaccttcgagcacatcatggctctcacgaagatgtcctctcccaccccacctgtg
ttggatccctatctcctgccagaggagcatccctcagcccatgagtactatgaccccaat
gactacattggaagcatccatcaggacatggacagggaggagctggagttggaggaagtg
gacctctacagaatgaacagccaggacaagctgggcctcacagtatgctaccggacagac
gatgaagaggacattgggatttatataagtgagatcgaccctaacagtatcgcggccaag
gatgggcgcatccgagaaggagatcgcattatccagattaatgggatagaggtgcagaac
cgtgaagaggctgtggctcttctaaccagtgaagaaaacaagaacttttctttgctgatt
gcaaggcctgaactccagctggacgagggctggatggacgatgacagaaacgactttctg
gaccacctgcacatggacatgcttgaggagcaacaccagcaggccatgcagttcaccgcc
agcatgctgcagcagaagaagcatgaggaagacgggggaaccacagacactgccaccatc
ctgtccaaccagcacgagaaggacagcggcgtgggacggacagacgagagcacacgcaac
gacgagagctcggagcaggagaacaacgtcgacgatgccaccgcgtcatccaccccgctg
gccgggcagaggaagctcacttgcagccaggacaccctgggcagcggcgacctgccgttt
agcaatgagtccttcctgtctgctgactgcgccgacaccgactacctgggcatccccgtg
gacgagtgcgagcgcttccgggagctcctggagctcaagtgccaggccaagaacagcaac
ccctacagcctgtactacgccagtagccccctggacgccagcaagagcgaccccgagagc
gtggacaaagagctggagctgctgaacgaggagctgcgcagcatcgagctggaatgcctg
agcatcgtgcgcgcgcacaagatgcagcagctccgggagcagtaccgcgagtcctggatg
ctgcacaacagcggcttccgcaactacaacaccagcatcgacgtccgcaggcacgagctg
tcggacatcaccgagctcccggagaaatccgacaaagacagctcgagcgcctacaacacg
ggggagagctgccgtagcaccccgctcaccttggaaatgtcccccgacaactccctgagg
agagtggcagagggcagcagcgagggggccgtggggaccacagaagcttacgggccgtcc
ccaaagaacctgctggccatcaccgaagatcccgaggtgggcagcgccagctacagcccc
cctcctcctcaagagctggggaccagccaggcccccgagagcagggagcggaggcccagc
gacgacagcgggagtcccagccccggcccgaagctggccggctcgtacctgtcccccttc
ccccactcgccctacaaacacgcccacatcccggcgcacgcgcagcactaccagagctac
atgcagctgatccagcagaagtcggccgtggagtacgcgcagagccagatgagcctggtg
agcatgtgcaaggacctgaactcggccggccaggcggaagccaggatggagtggaaagtg
aaggtccgcagcgacggcacgcgctacatcaccaagcggccggtgcgggaccgcctgctg
cgggagcgcgcgctcaagatccgcgaggagcgcagcggcatgaccaccgacgacgacgcg
gtgagcgagctcaagctggggcgctactggagcaaagaggagaggaagcagcacgtggtg
aaggccaaggagcagaggcgcaggcgcgagttcatgatgcagagcaggctggattgcctg
aaggagcagcaagcggccgacgacaggaaggagatgaacatccttgaactgagccacaaa
aagatgatgaagaagaggaataaaaagatatttgataattggatgacaatccaggaactc
ttaacccacggcacaaaatcaccagatggcacgagagtatacaattccttcttatccgtg
actactgtataa
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integrated database retrieval system
