Prionailurus bengalensis (leopard cat): 122487891
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Entry
122487891 CDS
T07574
Symbol
COL1A2
Name
(RefSeq) collagen alpha-2(I) chain isoform X1
KO
K06236
collagen type I alpha
Organism
pbg
Prionailurus bengalensis (leopard cat)
Pathway
pbg04151
PI3K-Akt signaling pathway
pbg04510
Focal adhesion
pbg04512
ECM-receptor interaction
pbg04611
Platelet activation
pbg04820
Cytoskeleton in muscle cells
pbg04926
Relaxin signaling pathway
pbg04933
AGE-RAGE signaling pathway in diabetic complications
pbg04974
Protein digestion and absorption
pbg05146
Amoebiasis
pbg05165
Human papillomavirus infection
pbg05205
Proteoglycans in cancer
pbg05415
Diabetic cardiomyopathy
Brite
KEGG Orthology (KO) [BR:
pbg00001
]
09130 Environmental Information Processing
09132 Signal transduction
04151 PI3K-Akt signaling pathway
122487891 (COL1A2)
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
122487891 (COL1A2)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
122487891 (COL1A2)
09142 Cell motility
04820 Cytoskeleton in muscle cells
122487891 (COL1A2)
09150 Organismal Systems
09151 Immune system
04611 Platelet activation
122487891 (COL1A2)
09152 Endocrine system
04926 Relaxin signaling pathway
122487891 (COL1A2)
09154 Digestive system
04974 Protein digestion and absorption
122487891 (COL1A2)
09160 Human Diseases
09161 Cancer: overview
05205 Proteoglycans in cancer
122487891 (COL1A2)
09172 Infectious disease: viral
05165 Human papillomavirus infection
122487891 (COL1A2)
09174 Infectious disease: parasitic
05146 Amoebiasis
122487891 (COL1A2)
09166 Cardiovascular disease
05415 Diabetic cardiomyopathy
122487891 (COL1A2)
09167 Endocrine and metabolic disease
04933 AGE-RAGE signaling pathway in diabetic complications
122487891 (COL1A2)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
pbg00536
]
122487891 (COL1A2)
Glycosaminoglycan binding proteins [BR:
pbg00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
122487891 (COL1A2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Collagen
COLFI
Motif
Other DBs
NCBI-GeneID:
122487891
NCBI-ProteinID:
XP_043444810
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All DBs
Position
A2:97129153..97164850
Genome browser
AA seq
1367 aa
AA seq
DB search
MLSFVDTRTLLLLAVTSCLATCQSLEEATARKGPTGDRGPRGERGPPGPPGRDGDDGIPG
PPGPPGPPGPPGLGGNFAAQYDPGKGVGLGPGPMGLMGPRGPPGASGAPGPQGFQGPAGE
PGEPGQTGPAGARGPPGPPGKAGEDGHPGKPGRPGERGVVGPQGARGFPGTPGLPGFKGI
RGHNGLDGLKGQPGAPGVKGEPGAPGENGTPGQTGARGLPGERGRVGAPGPAGARGSDGS
VGPVGPAGPIGSAGPPGFPGAPGPKGELGPVGNPGPAGPAGPRGEMGLPGVSGPVGPPGN
PGANGLTGAKGAAGLPGVAGAPGLPGPRGIPGPVGAAGATGARGLVGEPGPAGSKGESGN
KGEPGSAGPQGPPGPSGEEGKRGPNGEAGSAGPSGPPGLRGSPGSRGLPGADGRAGVMGP
PGPRGATGPAGVRGPNGDAGRPGEPGLMGPRGFPGAPGNVGPAGKEGPMGLPGIDGRPGP
IGPAGARGEPGNIGFPGPKGPTGDPGKNGDKGHAGLAGARGAPGPDGNNGAQGPPGPQGV
QGGKGEQGPAGPPGFQGLPGPAGTAGEVGKPGERGLPGEFGLPGPAGPRGERGPPGESGA
AGPSGPIGSRGPSGPPGPDGNKGEPGVLGAPGTAGPSGPSGLPGERGAAGIPGGKGEKGE
TGLRGEIGNPGRDGARGAPGAVGAPGPAGATGDRGEAGPAGPAGPAGPRGSPGERGEVGP
AGPNGFAGPAGAAGQPGAKGERGTKGPKGENGPVGPTGPVGSAGPSGPNGPPGPAGSRGD
GGPPGATGFPGAAGRTGPPGPSGITGPPGPPGAAGKEGLRGPRGDQGPVGRTGETGASGP
PGFAGEKGPSGEPGTAGPPGTPGPQGLLGAPGILGLPGSRGERGLPGVSGSVGEPGPLGI
AGPPGARGPSGAVGAPGVNGAPGEAGRDGNPGNDGPPGRDGQPGHKGERGYPGNIGPVGA
VGAPGPHGPVGPTGKHGNRGEPGPAGVVGPVGAVGPRGPTGPQGIRGDKGEPGDKGPRGL
PGLKGHNGLQGLPGLAGQHGDQGAPGSVGPAGPRGPAGPSGPMGKDGRTGHPGSVGPAGV
RGSQGSQGPAGPPGPPGPPGPPGPSGGGYDFGYEGDFYRADQPRSPPSLRPKDYEVDATL
KSLNNQIETLLTPEGSRKNPARTCRDLRLSHPEWSSGYYWIDPNQGCTMDAIKVYCDFST
GETCIRAQPENILAKNWYRNSKVKKHVWLGETINGGTQFEYNVEGVTTKEMATQLAFMRL
LANHASQNITYHCKNSIAYMDEETGNLKKAVILQGSNDVELVAEGNSRFTYTVLVDGCSK
KTNEWKKTIIEYKTNKPSRLPILDIAPLDIGGADQEIRVDVGPVCFK
NT seq
4104 nt
NT seq
+upstream
nt +downstream
nt
atgctcagctttgtggatacgcggactttgttgctgcttgcagtaacttcgtgcctagca
acatgccaatctttagaagaggcaactgcaagaaagggcccaactggagatagaggacca
cgtggagaaaggggtccgccaggcccaccaggcagagatggtgacgacggtatcccaggc
cctcctggcccacctggtcctcctggcccccctggtcttggcgggaactttgcggctcag
tatgaccctggaaaaggagttggccttggccctggaccaatgggtttgatgggacctaga
gggcctcctggtgcatctggagctcctggtcctcaaggtttccaaggacctgctggtgag
cctggtgagcctggtcaaactggtcctgcgggtgctcgtggtccacctgggcctcctggc
aaggctggtgaggatggtcaccctggaaaacctggacgacctggtgagagaggagttgtt
ggaccacagggtgctcgtggtttccctgggactcctggacttcccggcttcaagggcatt
aggggacacaatggtctggatggattgaagggacagcctggtgctccaggtgtgaagggt
gaacctggcgcccctggtgaaaatggaactccaggtcaaacaggagctcgtgggcttcct
ggtgagagaggacgtgtcggtgcccctggcccagctggtgcccgtggaagtgatggaagt
gtgggtcctgtgggtcctgctggtcccattgggtctgctggccctccaggcttcccaggt
gctcctggccccaagggtgaacttggaccggtcggtaatcctggtcctgctggtcccgcg
ggtccccgtggtgaaatgggtcttccaggtgtttctggccctgttggacctcctggtaac
cctggagccaacggcctgactggtgcgaagggtgctgctggcttgcccggtgttgctggg
gcacctggcctccctggaccccgtggtattcccggccctgttggtgctgctggcgctact
ggtgccaggggactcgttggtgaacctggtccagctggttccaaaggagagagtggcaac
aagggtgagcccggctctgctggtcctcaaggtcctcctggtcccagtggtgaagaagga
aagagaggccccaatggtgaagctggatctgctggcccctctgggcctcctgggctgaga
ggaagtcctggttctcgtggtctccctggagctgatggcagagccggtgttatgggccct
cctggcccccgtggtgctactggccctgctggtgtccgaggccccaatggagatgctggt
cgccctggagagcccggcctcatgggaccccgaggttttcctggtgcccctggaaatgtt
ggcccagctggcaaagaaggtcccatgggcctccctggcattgatggccggcctggacca
attggcccagctggagcaagaggagagcctggcaacatcggattccctggccccaaaggc
cccactggtgatccaggcaaaaatggtgataaaggtcatgctggtcttgccggtgctcgg
ggtgctccaggtcctgacggaaacaatggtgctcagggaccccctggaccacaaggtgtc
caaggtggaaaaggtgaacagggtcccgctggtcctccaggcttccagggtctgcctggc
cctgcaggtacagctggtgaagttggcaaaccaggagaaaggggtctccctggtgaattt
ggtctccctggtcctgctggcccaagaggggagcgtgggccccctggtgaaagtggtgct
gctggtccttctggtcctattggaagccgaggtccttctggaccccctgggcctgatgga
aacaagggtgaacctggtgtgcttggtgctccaggcactgctggtccatctggtcccagt
ggactcccaggagagaggggtgctgccggcatacctggaggcaagggagaaaagggtgaa
actggtctcagaggtgaaattggtaacccaggcagagatggtgcccgtggtgctcctggt
gctgtaggtgcccctggtcctgctggagccactggtgaccggggtgaagctggtcctgcc
ggtcccgctggtcctgctggtcctcgtggtagccctggtgaacgtggtgaggttggtccc
gctggccccaacggatttgctggtcctgctggtgctgctggtcaacctggtgctaaagga
gagagaggaaccaaagggcccaagggtgaaaatggccccgttggtcccacgggccctgtt
ggatctgctggcccatccggtccaaatggtccccctggtcctgctggcagtcgtggtgat
ggtggccctcctggtgctactggtttccctggtgctgctggacggactggtcctcctgga
ccctctggtatcactggccctcctggtccccctggtgctgctggtaaagaaggacttcgt
gggcctcggggtgaccaaggtccagttggccgaacaggggaaacaggtgcatctggtccc
cctggctttgctggtgagaagggtccctctggagagcctggaactgctggaccccctgga
acccctggtcctcaaggtcttcttggtgctcctggtattctgggtctcccaggctctaga
ggtgaacgtggtctaccaggtgtttctggatctgtgggtgaacctggacctctcggcatc
gctggtccacctggggctcgtggtccctctggtgctgtgggcgcacctggagtcaatggt
gctcctggtgaagctggtcgcgatggcaaccctgggaatgatggtcccccaggccgcgac
ggtcaacctggacacaagggagaacgcggttaccctggcaacattggtccagttggcgct
gtgggcgcacctggtcctcatggccccgtgggtcccactggaaaacatggaaaccgtggt
gaacctggtcctgctggtgttgttggtcccgttggtgctgttggtccaagaggtcctact
ggcccacaaggtattcgaggtgataaaggagagcctggtgacaaggggcctagaggtctt
cctggcttaaagggacacaatggactgcaaggtcttcctggtcttgctggccaacatggc
gatcaaggtgctcctggctctgtgggtcctgctggtcctaggggccctgctggtccttct
ggccctatgggcaaagacggtcgcactggacatcctggttcagtcggacctgccggcgtt
cgtggctctcagggtagccaaggtcctgctggcccccctggtccccctggccctcctgga
cctcctggcccaagtggtggtggttatgattttggttacgaaggggacttctacagggct
gaccagcctcgctcaccaccttctctcagacccaaggattatgaagttgatgctactctg
aaatctctcaacaaccagattgagacccttcttactcctgaaggctctaggaagaaccca
gctcgcacatgccgtgacttgagacttagccaccccgagtggagcagtggttactactgg
attgaccctaaccaaggatgcactatggatgctatcaaagtatactgtgatttctctact
ggtgaaacctgtatccgggctcaacctgaaaacatcctagccaagaactggtacagaaat
tccaaggtcaagaagcacgtgtggttaggagaaactatcaatggtggtacccagtttgaa
tataatgttgaaggagtcaccaccaaggaaatggctactcaacttgccttcatgcgcctg
ctggccaaccatgcctctcaaaacatcacctaccactgcaagaacagcattgcatacatg
gatgaagagactggcaacctgaaaaaggctgtcattctgcaaggctccaacgatgttgaa
cttgttgccgagggcaacagcaggttcacttacactgttcttgtagacggctgctctaaa
aagacaaatgaatggaaaaagacaatcatcgaatacaaaacaaataagccatcccgcctg
cctatccttgatattgcacctttggacatcggtggtgctgaccaagaaatcagggtggac
gttggcccagtctgtttcaaataa
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