Prionailurus bengalensis (leopard cat): 122488637
Help
Entry
122488637 CDS
T07574
Symbol
XAB2
Name
(RefSeq) pre-mRNA-splicing factor SYF1
KO
K12867
pre-mRNA-splicing factor SYF1
Organism
pbg
Prionailurus bengalensis (leopard cat)
Pathway
pbg03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
pbg00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
122488637 (XAB2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pbg03019
]
122488637 (XAB2)
03041 Spliceosome [BR:
pbg03041
]
122488637 (XAB2)
Messenger RNA biogenesis [BR:
pbg03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
122488637 (XAB2)
Spliceosome [BR:
pbg03041
]
Complex B
Other components
Prp19-related factors
122488637 (XAB2)
Complex C
122488637 (XAB2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HAT_Syf1_CNRKL1_C
HAT_Syf1_M
HAT_Syf1_CNRKL1_N
HAT_PRP39_C
HAT_PRP39_N
TPR_14
TPR_12
TPR_2
TPR_8
Suf
TPR_19
TPR_15
ARM_TT21
ARM_TT21_C
TPR_1
TPR_NPHP3
DHR-2_Lobe_A
Motif
Other DBs
NCBI-GeneID:
122488637
NCBI-ProteinID:
XP_043446157
LinkDB
All DBs
Position
A2:6109176..6123343
Genome browser
AA seq
855 aa
AA seq
DB search
MVVMARLSRPERPDLVFEEEDLPYEEEIMRNQFSVKCWLRYIEFKQGAPKPRLNQLYERA
LKLLPCSYKLWYRYLKARRAQVKHRCVTDPAYEDVNNCHERAFVFMHKMPRLWLDYCQFL
MDQGRITHTRRTFDRALRALPITQHSRIWPLYLRFLRSHPLPETAVRGYRRFLKLSPESA
EEYIEYLQSSDRLDEAAQRLATVVNDEHFVSKAGKSNYQLWHELCDLISQNPDKVQSLNV
DAIIRGGLTRFTDQLGKLWCSLADYYIRSGHFEKARDVYEEAIRTVMTVRDFTQVFDSYA
QFEESMIAAKMETASELGREEEDDVDLELRLARFEQLIGRRPLLLNSVLLRQNPHHVHEW
HKRVALHQGRPREIINTYTEAVQTVDPFKATGKPHTLWVAFAKFYEDNGQLDDARVILEK
ATKVSFKQVDDLASVWCECGELELRHENYDQALRLLRKATALPARRAEYFDGSEPVQNRV
YKSLKVWSMLADLEESLGTFQSTKAVYDRILDLRIATPQIVINYAMFLEEHKYFEESFKA
YERGISLFKWPNVSDIWSTYLTKFIARYGGRKLERARDLFEQALDGCPPKYAKTLYLLYA
QLEEEWGLARHAMAVYERATRAVEPAQQYDMFNIYIKRAAEIYGVTHTRGIYQKAIEVLS
DEHAREMCLRFADMECKLGEIDRARAIYSFCSQICDPRTTGAFWQTWKDFEVRHGNEDTI
REMLRIRRSVQATYNTQVNFMASQMLKVSGSATGTVSDLAPGQSGMDDMKLLEQRAEQLA
AEAERDQPPRAQSKILFVRSDASREELAELAQQANPEEIELGGDEDEDEMDLEPNEVRLE
QQSVPAAVFGSLKED
NT seq
2568 nt
NT seq
+upstream
nt +downstream
nt
atggtggtgatggcgcgtctttcccggccggagcggccggaccttgttttcgaggaagag
gacctcccctacgaggaggaaatcatgcggaaccagttctccgtcaaatgctggctccgc
tacattgagttcaagcagggtgccccgaagccgaggctcaatcagctgtacgagcgggcc
ctgaagctgctgccctgcagctacaaactctggtaccgatacctgaaggcgcgccgggca
caggtgaagcatcgctgcgtgaccgacccggcctacgaagatgtcaacaactgccacgag
agggcctttgtgttcatgcacaagatgccacggctgtggctggactattgccagttcctg
atggaccagggccgaatcacacacacccgccgcactttcgaccgcgctctccgggcgctg
cccatcacgcagcactctcgcatctggcccctgtacctgcgcttcctgcgctcacacccg
ctacctgagacggccgtgcggggctaccggcgcttcctcaagctgagccccgagagtgca
gaggagtacatcgagtacctccagtccagtgaccggctggatgaagccgcgcagcgcctg
gccaccgtggtgaacgacgagcactttgtgtccaaggctggcaagtccaactaccagctg
tggcacgagctctgtgacctcatctcccagaacccagacaaggtgcagtcactcaatgtg
gacgccatcatccgcgggggcctcacccgcttcaccgaccagctgggcaagctctggtgc
tcgctggccgactactacatccgcagcggccacttcgagaaggctcgagacgtgtacgag
gaggccatccggactgtgatgaccgtgcgcgacttcacccaggtgttcgacagctacgcg
cagtttgaggagagcatgatcgcagccaagatggagacggcctcagaactggggcgggag
gaggaagatgatgtggacctggagctgcgcctggcccgcttcgagcagctcattggccgg
cggcccctgctcctcaacagcgtcttgctgcgccagaacccacaccacgtgcacgagtgg
cacaagcgcgtggccctgcaccagggccgcccccgcgagatcatcaacacgtacacggag
gccgtgcagacggtggaccctttcaaggctacaggcaagccccacacactgtgggtcgcg
tttgccaagttttacgaggacaacgggcagctggacgatgcccgcgtcatcctggagaag
gccaccaaggtgagcttcaagcaggtggacgacctggccagcgtgtggtgtgagtgtggc
gagctggagctccggcacgagaactacgaccaggctttgcgactactgcggaaggccacc
gcgctgcctgcccgccgagccgagtacttcgacggctcggagcccgtgcagaaccgcgtg
tacaagtccctgaaggtgtggtcgatgctcgccgacctggaggagagcctgggcaccttc
cagtccaccaaggccgtctacgaccgcatcctggatctgcgtatcgccacgccccagatt
gtcatcaactacgccatgttcttggaggagcacaagtacttcgaggagagcttcaaggcg
tatgagcgtggcatctcgctgttcaagtggcccaacgtgtctgacatctggagcacctac
ctgaccaaattcattgcccgctacgggggccgcaagctggagcgggcgcgggacctcttc
gaacaggcgctggacggctgccctcccaaatatgcgaagacgctgtacctgctgtacgcc
cagctggaggaagagtggggcctggcccggcacgccatggcagtgtacgagcgcgccacc
cgggccgtggagcccgcccagcagtacgacatgttcaacatctacatcaagcgtgcggcc
gagatctacggggtcacccacacccgtggcatctaccagaaggccatcgaggtgctgtcg
gacgaacacgcccgggagatgtgcctgcggttcgcggacatggagtgcaagctcggcgag
atcgaccgggcgcgggccatctacagcttctgctcccagatctgtgacccccggaccacc
ggggctttctggcagacgtggaaggacttcgaggtccgtcacggcaatgaggacaccatc
cgggagatgctgcggatccgccgcagcgtgcaggccacgtacaacacgcaggtcaacttc
atggcctcgcagatgctcaaggtgtcgggcagcgccacgggcaccgtgtctgacctcgcc
cccgggcagagcggcatggacgacatgaagctgctggagcagcgggcagagcagctggcg
gccgaggccgagcgggaccagcccccgcgggcccagagcaagatcctgtttgtgaggagc
gacgcatcccgggaggagctggccgagctggcccagcaagccaacccggaggagatcgag
ctagggggggacgaggacgaggacgagatggatctggaacccaacgaggtgcggttggag
cagcagagtgtgccggctgccgtgttcgggagcctgaaggaggactga
DBGET
integrated database retrieval system
