KEGG   Prionailurus bengalensis (leopard cat): 122489014
Entry
122489014         CDS       T07574                                 
Name
(RefSeq) high mobility group protein B1-like
  KO
K10802  high mobility group protein B1
Organism
pbg  Prionailurus bengalensis (leopard cat)
Pathway
pbg03410  Base excision repair
pbg04140  Autophagy - animal
pbg04217  Necroptosis
pbg04613  Neutrophil extracellular trap formation
Brite
KEGG Orthology (KO) [BR:pbg00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    122489014
 09140 Cellular Processes
  09141 Transport and catabolism
   04140 Autophagy - animal
    122489014
  09143 Cell growth and death
   04217 Necroptosis
    122489014
 09150 Organismal Systems
  09151 Immune system
   04613 Neutrophil extracellular trap formation
    122489014
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:pbg03036]
    122489014
   03400 DNA repair and recombination proteins [BR:pbg03400]
    122489014
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:pbg04147]
    122489014
Chromosome and associated proteins [BR:pbg03036]
 Eukaryotic type
  Nucleosome assembly factors
   HMG (high mobility group) proteins
    122489014
DNA repair and recombination proteins [BR:pbg03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Other BER factors
     122489014
   MMR (mismatch excision repair)
    Other MMR factors
     122489014
Exosome [BR:pbg04147]
 Exosomal proteins
  Exosomal proteins of colorectal cancer cells
   122489014
SSDB
Motif
Pfam: HMG_box_2 HMG_box Pam3_Gp34
Other DBs
NCBI-GeneID: 122489014
NCBI-ProteinID: XP_043446464
LinkDB
Position
B2:108500957..108501462
AA seq 130 aa
MSSYSFFVLACREEHKKHPDASVSFSEFSRKCSERWKTMSAKEKGKLGDMAKVEKALYER
EMKANIPAKGETKKKLQDSNEPKGPPLAFFLFCFEYCSQIKEHPSLSIGNVAKKLGETWN
NTATDDKQSH
NT seq 393 nt   +upstreamnt  +downstreamnt
atgtcatcgtattcattctttgtgctagcttgccgagaggagcacaagaagcacccagat
gcttcagtcagcttctcagagttttctcgtaagtgctcagagaggtggaagaccatgtct
gctaaagagaaaggaaaacttggagacatggcaaaggtggaaaaggccctttatgaaaga
gaaatgaaagctaatatccccgctaaaggggaaacaaaaaagaagttgcaggattccaat
gaacccaagggtcctcctttggcctttttcttgttttgttttgagtattgctcccagatc
aaagaacatcccagcctatccattggtaatgttgcaaagaaactgggagagacatggaat
aatactgccacagatgacaagcaatcccactaa

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