Prionailurus bengalensis (leopard cat): 122490129
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Entry
122490129 CDS
T07574
Symbol
ARID1B
Name
(RefSeq) AT-rich interactive domain-containing protein 1B isoform X1
KO
K11653
AT-rich interactive domain-containing protein 1
Organism
pbg
Prionailurus bengalensis (leopard cat)
Pathway
pbg03082
ATP-dependent chromatin remodeling
pbg04714
Thermogenesis
pbg05225
Hepatocellular carcinoma
Brite
KEGG Orthology (KO) [BR:
pbg00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
122490129 (ARID1B)
09150 Organismal Systems
09159 Environmental adaptation
04714 Thermogenesis
122490129 (ARID1B)
09160 Human Diseases
09162 Cancer: specific types
05225 Hepatocellular carcinoma
122490129 (ARID1B)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pbg03000
]
122490129 (ARID1B)
03021 Transcription machinery [BR:
pbg03021
]
122490129 (ARID1B)
03036 Chromosome and associated proteins [BR:
pbg03036
]
122490129 (ARID1B)
Transcription factors [BR:
pbg03000
]
Eukaryotic type
Helix-turn-helix
ARID
122490129 (ARID1B)
Transcription machinery [BR:
pbg03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
122490129 (ARID1B)
Chromosome and associated proteins [BR:
pbg03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
122490129 (ARID1B)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BAF250_C
ARID
Motif
Other DBs
NCBI-GeneID:
122490129
NCBI-ProteinID:
XP_043448594
LinkDB
All DBs
Position
B2:141210140..141660031
Genome browser
AA seq
2443 aa
AA seq
DB search
MAARAAAAAAAAARAGSGERRAPPGPRPAPGARDLEAGARGAAAAAPGPMLGGGGDGGGL
NNVHHHPLHPRHELNMAHNASTAAAAASTNSAKSGGSEAALKEGGSAAALSSSSSAAAAA
AAAASSSSSSSGPGSAMETGLLPNHKLKTVGEAPAAPPHQQHHHHHHAHHHHHHAHHLHH
HHHALQQQLNQFQQQQQQQQQQQQQQQQQQHPISNNSLGGAGGGAAQPGPDMEQPQHGGA
KDSAAGSQADPPGQPLLSKPGDEDDAPPKMGEPAGGRFEHPGLGALGAQQPPVAVPGGGG
GGGGGGGGPAAVSEFNNYYGSAAPASGGPGGRTGPCFDQHGGQQSPGMGMMHSASAAAGA
PNSMDPLQNSHEGYPNSQYNHYPGYSRPSAGGGGGGGGGGGGGGGGGGGGGGSGGGGGGG
GGGGAGAGAVAAAAAAAAAAAGGGGGGYGGSSSGYGVLSSPRQQGGGMMMGPGGGGAASL
SKAAAGAAAGGFQRFAGQNQHPSGATPTLNQLLTSPSPMMRSYGGSYPDYSSPSAPPPPP
PSQPQSQAAAAAAAGAAAGGQQAAAGMGLGKDMGAQYAAASPAWAAAQQRSHPAMSPGTP
GPTMGRSQGSPMDPMVMKRPQLYGMGSNPHSQPQQSSPYPGGSYGPPGPQRYPISIQGRT
PGAMGGMQYPQQQMPPQYGQQGVSGYCQQGQQPYYNQQPQPPHLTPQAQYLPPQPQQRYQ
PQQDMSQEGYGTRSQPPLAPGKPNHEDLNLIQQERPSSLPVEVLTSEDTAFGLKDLSGSI
DDLPTGTEATLSSAVSASGSTSSQGDQSNPAQSPFSPHASPHLSSIPGGPSPSPVGSPVG
SNQSRSGPISPASIPGSQMPPQPPGSQSESSSHPALSQSPMPQERGFMAGTQRNPQMSQY
GPQQTGPSMSPHPSPGGQMHPGISSFQQSNSSGTYGPQMSQYGPQGNYSRPPTYSGVPSA
SYSGPGPGMGINANNQMHGQGPSQPCGAMPLGRMPSAGMQNRPFPGNMSSMTPSSPGMSQ
QGGPGMGPPMPTVNRKAQEAAAAVMQAAANSAQSRPPYIRSPAYPSQSGAGGRPMFSSQH
PNYGNSQAPMMHQPDQYGQGSFPGMNQSGLMASSSPYSQPVNNSSGLMNTQAPPYSMAPN
MVNSSTASMGLADMMSPGESKLPLPLKADGKEEGTPQPESKSKDSYSSQGISQPPTPGNL
PVPSPMSPSSASISSFHGDESDSISSPGWPKTPSSPKSSSSTTTGEKITKVYELGNEPER
KLWVDRYLTFMEERGSPVSSLPAVGKKPLDLFRLYICVKEIGGLAQVNKNKKWRELATNL
NVGTSSSAASSLKKQYIQYLFAFECKIERGEEPPPEVFSTADTKKQPKLQPPSPANSGSL
QGPQTPQSTSSNSMADVQGDLKPPTPASTPHGQMTPMQGGRSGTVSVHDPFSDASDSSFP
KRNSMTPSAPYQQSMSMPDVMGRMPYEPNKDPFGGMRKVPGSSEPFMTQGQMPTSSVQDV
YNQSPSGALSGLGMGRQQFPYGAGYDRRHEPYGQQYPGQGPPSGQPPYGGHQPGLYPQQP
NYKRHMDGMYGPPAKRHEGDMYNMQFGSQQQEMYNQYGSSYSGPDRRPIQGQYPYPYNRE
RVQGPGQMQPHGIPPPMMGGPMQSSSSEGPQQSMWATRNDMPYPYQNRQGPGGPAQAPPY
PGMNRTDDMLVPEQRINHESQWPSHVSQRQPYMSSPASMQPITRPPQSSYQTPPSLPNHI
SRAPSPASFQRSLESRMSPSKSPFLPSLKMQKVLPTVPTAQVTGPPPQPPPIRREITFPP
GSVEASQPVLKQRRKITSKDIVTPEAWRVMMSLKSGLLAESTWALDTINILLYDDSTVAT
FSLSQLSGFLELLVEYFRKCLIDIFGILTEYEVGDPSQKALDHNAGKRADGQSLADESGK
EEEGTECVDEEDDEEDDEEDDEEEDDGKTETEEKSSSTLASPNATADPKEKPRQASKFDK
LPIKIVKKNNLFVVDRSDKLGRVQEFNSGLLHWQLGGGDTTEHIQTHFESKMEIPPRRRP
PPPLSSTGRKKEQEGKGDSDEQQEKSIIATIDDVLCARPGALPEDANPGTQTESGKFPFG
IHQAKSHRNIKLLEDEPRSRDETPLCTIAHWQDSLAKRCICVSNIVRSLSFVPGNDAEMS
KHPGLVLILGKLILLHHEHPERKRAPQTYEKEEDEDKGVACSKDEWWWDCLEVLRDNTLV
TLANISGQLDLSAYTESICLPILDGLLHWMVCPSAEAQDPFPTVGPNSVLSPQRLVLETL
CKLSIQDNNVDLILATPPFSRQEKFYATLVRYVGDRKNPVCREMSMALLSNLAQGDALAA
RAIAVQKGSIGNLISFLEDGVTMAQYQQSQHNLMHMQPPPLEPPSVDMMCRAAKALLAMA
RVDENRSEFLLHEGRLLDISISAVLNSLVASVICDVLFQIGQL
NT seq
7332 nt
NT seq
+upstream
nt +downstream
nt
atggccgcgcgggcagcagcggcggcggcggcggcggcgcgggcgggcagcggcgagcgg
cgggcgccccccgggccgcggccggcgcccggggcccgggacctggaggcgggggcgcgc
ggcgcggcggcggcggcaccgggacccatgctggggggcggcggcgacggcggcggcctg
aataatgtgcaccaccaccccctgcacccccgtcacgaactgaacatggcccataacgcg
agcacggcggccgccgccgccagcactaacagcgccaagagcggcggctccgaggcggct
ctcaaggagggtggaagcgccgccgcgctgtcctcctcctcctccgcggcggcggcggcg
gcggcggcggcgtcctcctcttcctcctcgtcgggcccgggctcggccatggagacgggg
ctgctccccaaccacaaactgaaaaccgttggcgaagcccccgccgcaccgccccaccag
cagcaccaccaccaccaccatgcccaccaccaccaccaccatgcccaccacctccaccac
caccaccacgcactacagcagcagctaaaccagttccagcagcagcagcagcagcagcaa
cagcaacagcagcagcagcagcagcagcaacatcccatttccaacaacagcctcggcggc
gcgggcggcggcgccgctcagcccggtcccgacatggagcagccgcaacatggaggcgcc
aaggacagtgccgcgggcagccaggccgaccccccgggccagcctctgctgagcaagccg
ggcgacgaggacgacgcaccgcccaagatgggggagccggcgggcggccggttcgagcac
cctggcctgggcgccctgggcgcgcagcagccgccggtcgccgtgcccgggggcggcggc
ggcggtggcggcggcggcggcggcccggcggccgtctcggagtttaataattactatggc
agcgctgcccctgctagcggcggccccggcggccgcactgggccttgctttgatcaacat
ggcggacaacaaagccccgggatggggatgatgcactccgcctcagccgccgccggagcc
cccaacagcatggaccccctgcagaactcccacgaagggtaccccaacagccagtacaac
cattatccgggctacagccggcccagcgcgggcggcggcggcggcggcggcggcggtgga
ggaggaggaggaggaggaggaggaggaggcggcggcagcggaggaggaggaggaggagga
ggaggaggaggagcaggagcgggagctgtggcggcggcggccgcggcggcggcggcagca
gcaggaggcggcggcggcggctatgggggctcgtcctcggggtacggggtgctgagctcc
ccccggcagcagggcggcggcatgatgatgggccccgggggcggcggggccgcgagcctc
agcaaggcggccgccggcgcggcggcggggggcttccagcgcttcgccgggcagaaccag
cacccgtcgggggccaccccgaccctcaaccagctgctcacctcgcccagccccatgatg
aggagctacggcggcagctaccccgactacagcagccccagcgcgccgccgccgccgccg
ccgtcgcagccccagtcccaggcggcggcggcggcggcggcgggggcggcggcgggcggc
cagcaggcggccgcgggcatgggcttgggcaaggacatgggcgcccagtacgccgctgcc
agcccggcctgggcggccgcgcaacaaaggagccacccggcgatgagccccggcaccccc
ggcccgaccatgggcagatcccagggcagcccaatggatcctatggtgatgaagaggccg
cagttatacgggatgggcagtaaccctcattctcagcctcagcagagcagcccttacccc
ggaggctcctacggtcccccagggccacagcgctatccaatcagcatccagggtcggacc
ccaggggccatgggaggaatgcagtacccacagcagcagatgccgcctcagtatggacag
caaggcgtgagtggttactgccagcagggccagcagccttactacaaccagcagccgcag
cccccgcacctcaccccgcaggcgcagtatctgccgccccagccccagcagcggtaccag
ccccagcaggacatgtctcaggaaggctatggaactaggtctcaacctcctttggctcct
ggaaaacctaaccacgaagacttgaacttaatacaacaagaaagaccatcaagtttacca
gttgaagtcttgacctcggaggataccgcctttggactcaaggacctgtctggctccatt
gatgacctccccacgggaacggaagccactctgagctcagcagtcagtgcgtctggatcc
acgagcagccaaggggatcagagcaaccctgctcagtcgcctttctctccacacgcatcc
ccccatctctccagcatccccgggggcccgtcgccttctcctgtcggctctcctgtggga
agcaaccagtcgcgatctggcccaatttctcccgcaagtattccaggcagtcagatgcct
cctcagccacctgggagccagtcagaatccagttcccatcctgccttgagccagtcacca
atgccacaggaaagaggttttatggcaggcacacaaagaaaccctcagatgtctcaatat
ggacctcaacagacaggaccatccatgtcgcctcatccttctcctggaggccagatgcat
cctggaatcagtagctttcagcagagtaactcaagtgggacttatggtccgcagatgagc
cagtatggaccacaaggtaactactccagacccccaacgtatagtggggtgcccagtgcg
agctacagcggcccagggcccggcatgggcatcaatgccaacaaccagatgcacggacaa
gggccaagccagccgtgtggtgctatgcccctgggacgaatgccatcagctgggatgcag
aacaggccgtttcctggaaatatgagcagcatgacccccagctctcccggcatgtcccag
cagggagggccaggaatggggccaccgatgccaaccgtgaaccgtaaggcacaggaggca
gctgccgcagtgatgcaggccgctgcaaactcggcacaaagcaggccaccatacattagg
tcgcctgcttatcccagccagtctggggctggcggacgccccatgttttcttcccagcac
cccaactatggcaactctcaggctcccatgatgcaccagcctgaccagtacgggcaaggc
agtttcccgggcatgaaccagagtggacttatggcttccagctctccctacagccagccc
gtcaacaacagctctgggctcatgaacacccaggcacccccctacagcatggcgcccaat
atggtgaacagctcaacagcatctatgggtcttgcagatatgatgtctcctggcgaatcc
aaattgcccctgcctctcaaagcagacggtaaagaagaaggcactccacagcccgagagc
aagtcgaaggatagctacagctctcagggtatatctcagcccccaacccccggcaacctg
ccagtcccttccccaatgtcccccagctctgctagcatctcctcatttcatggagatgaa
agcgatagcattagcagcccaggctggccaaagactccatcaagccctaagtccagctca
tccaccaccactggggaaaagatcacaaaggtgtatgagttggggaatgagccggagaga
aagctgtgggtcgaccgataccttaccttcatggaagagagaggctcccccgtctccagt
ctgcccgcggtgggcaagaagcccttggacctgttccggctctacatctgcgtcaaagag
atcggaggtttggcacaggttaataaaaacaagaagtggcgtgagctggcaaccaaccta
aatgttggcacttcaagcagtgcagcgagctccctgaaaaagcagtatatccagtacctg
tttgcctttgagtgcaagattgagcgcggggaggagcccccgccggaagtcttcagcacc
gcggacaccaagaagcagccgaagctccagccgccctctcctgcgaactcagggtccttg
caaggtcctcagaccccccagtcaaccagcagcaactcgatggcagacgtacaaggcgac
ctgaagccacctaccccggcgtctaccccgcatggacagatgaccccaatgcaaggtgga
agaagcggtacagtcagcgtgcacgacccgttctcagacgccagtgactcatcgttccca
aaacggaactccatgaccccgagcgccccgtaccagcagagcatgagcatgcctgacgtg
atgggcaggatgccctatgaacccaacaaggaccccttcggtggaatgagaaaagtgcct
gggagcagtgagccctttatgactcaaggacagatgcccactagcagtgtgcaggacgtg
tataaccagagtccctccggagcgctatccggtctgggcatggggcggcagcagtttccc
tacggagccggctacgaccgacggcacgaaccttacgggcagcagtacccaggccaaggc
cctccctcaggacagccgccatatggaggacaccagcccggcctgtatccacagcagccg
aattacaaacgccatatggacggcatgtatgggcctccggccaaacgccacgagggagac
atgtacaacatgcagttcggcagccagcagcaagagatgtataaccagtacggaagttcc
tactccggaccggacaggaggcccatccaggggcagtatccgtacccctacaacagagag
agggtgcagggccccgggcagatgcagccgcacgggatcccgcctcccatgatgggcggc
cccatgcagtcgtcctccagcgaagggcctcagcagagcatgtgggcgacgcgcaatgat
atgccttacccctaccagaaccggcagggccccgggggcccggcccaggccccgccgtat
ccaggcatgaaccgcacggatgatatgctggtacctgagcaaaggatcaatcacgagagc
cagtggccttcccacgtcagccaacgtcagccttatatgtcctctcccgcctccatgcag
cccatcacgcgcccgcctcagtcatcctaccagacgcctccatcactgccaaaccacatc
tccagagcccccagccccgcgtccttccagcgctccctggagagccgcatgtctcccagc
aagtctccctttctgccctctctgaagatgcagaaggtcctgcccaccgtccccacggcc
caggtcacgggcccgcccccccagccacccccgatccgaagggagatcaccttccctcct
ggctcagtcgaggcatcgcagccagtcttgaaacaaaggcgaaagattacctcaaaagat
atcgttactcctgaggcctggcgtgtgatgatgtccctcaagtccggtcttttggccgaa
agtacatgggctctggacaccattaacattctcctgtacgatgacagcactgtcgccacc
ttcagtctctcccagctgtccggatttctggaacttttagtagagtactttagaaaatgc
ctaattgacatttttggaattcttacggaatatgaggtgggagaccccagccaaaaagca
cttgatcacaatgcggggaagagagctgacggccagtccttggccgacgagtctgggaaa
gaggaggagggcaccgagtgtgtggacgaggaggacgacgaggaggacgacgaggaggac
gacgaggaggaggacgacgggaagacggagaccgaggagaagagcagctcgactctggcc
tctcccaacgccactgcggatccgaaggagaagcccaggcaagctagcaagttcgacaag
ctcccgataaagatagtcaaaaagaacaacctgtttgtggtcgaccgatctgacaagctg
ggtcgtgttcaggagttcaacagcggacttctgcactggcagcttggtgggggggacacc
accgagcacatccagactcactttgagagcaagatggaaattcctcctcgcaggcgtcca
cctccccctctgagctccaccgggaggaagaaagagcaggaaggaaaaggcgattctgac
gagcagcaagagaagagcatcatcgcgaccatcgatgatgtcctctgtgctcggccgggg
gcgctgcccgaagatgcaaaccctggtacccagaccgagagcgggaagtttccctttggg
atacatcaagccaaaagtcaccggaacatcaagctgctggaggacgagcccaggagccga
gacgagactcctctctgcaccatcgcgcactggcaggattccctggccaagcgctgcatc
tgtgtgtcgaatattgtccgtagcttgtcttttgtgcctggcaatgacgccgaaatgtcc
aaacatccaggcttggtgctgatcctggggaagctgattctccttcaccacgagcatcca
gagaggaagcgagcgccgcagacctacgagaaagaggaagacgaggacaaaggggtggcc
tgcagcaaagacgagtggtggtgggactgcctggaggtcctaagggacaacacgctggtc
acgttggccaacatttccgggcaactagacttgtctgcgtacacagaaagcatctgcctg
ccgattctggacggcttgctgcactggatggtgtgcccgtcggcagaggcacaagacccc
tttccaaccgtgggacccaactctgtcctgtcgcctcagagacttgtgctggagaccctc
tgcaaactcagtatccaggacaacaacgtggacctgatcttggccacgcctccatttagt
cgccaggagaaattctacgctacgttagttaggtacgttggggatcgcaaaaacccagtc
tgtcgagaaatgtccatggcgctcttatcgaaccttgcccaaggggacgcgctggcagca
agggcaatagctgtgcagaaggggagcatcggaaacttgataagcttcctagaggacggg
gtcaccatggcccagtatcagcagagccagcataacctcatgcacatgcagccgccgcct
ctagaaccacctagcgtggacatgatgtgcagggcggccaaggctctgctggccatggcc
agggtggacgagaaccgctcggaattccttctgcacgagggtcgattgctggatatctcg
atatcagccgtcctgaactctctggttgcgtctgtcatctgtgatgtactgtttcagatt
gggcagttatga
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integrated database retrieval system
