Prionailurus bengalensis (leopard cat): 122491076
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Entry
122491076 CDS
T07574
Symbol
COL18A1
Name
(RefSeq) collagen alpha-1(XVIII) chain isoform X1
KO
K06823
collagen type XVIII alpha
Organism
pbg
Prionailurus bengalensis (leopard cat)
Pathway
pbg04974
Protein digestion and absorption
Brite
KEGG Orthology (KO) [BR:
pbg00001
]
09150 Organismal Systems
09154 Digestive system
04974 Protein digestion and absorption
122491076 (COL18A1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
pbg04147
]
122491076 (COL18A1)
00535 Proteoglycans [BR:
pbg00535
]
122491076 (COL18A1)
00536 Glycosaminoglycan binding proteins [BR:
pbg00536
]
122491076 (COL18A1)
Exosome [BR:
pbg04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
122491076 (COL18A1)
Proteoglycans [BR:
pbg00535
]
Extracellular matrix (ECM) proteoglycans
Basement membrane proteoglycans
122491076 (COL18A1)
Glycosaminoglycan binding proteins [BR:
pbg00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
122491076 (COL18A1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Endostatin
Collagen
DUF959
Collagen_trimer
Fz
Laminin_G_3
Motif
Other DBs
NCBI-GeneID:
122491076
NCBI-ProteinID:
XP_043449343
LinkDB
All DBs
Position
C2:complement(1239809..1330898)
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AA seq
1741 aa
AA seq
DB search
MARDPGGRLGLLLLLLLLTYGLAAAQVDLLNWLWAPRTAGPTVEPASAPPRSPHVQPTEE
TAAHVAPRDDPTEQGRAPASPEPPPGRLETGRDPASAAPTASTAGPDTKEENIAGVGAKI
LNVAQGIRSFVQLWDGTTPSQSSTGAETPAPGTPTAPLTLPGPSGVPPEDGTTLWLGSRA
LTSPDTQRTEAGTLPVPTQLPPSPGGPRAPLREPSVPPSSPGRASLSSAPGGAPPRGTQP
SSGRPHDLDGGGPSPMSARARRQRRLADSRRPAPHLLPLVTGLLGAHAAPLALSSDLPAL
VSPIPLLAVTGDKGAWAPHVANSVGPGLANNSALRGADLPTPTGQPARPAAGRCLPLPPS
LPVCSHLGIGRSWLPNHLRHASSEEVRAAARAWGALLRTHCHRFLAWFFCLLLAPPCGAG
PLPAPPPCRQFCEALEDACWSHLDGGGLPVTCASLPAQEDGVCVFIGPGAESLGTEVGLL
QLLGEPPPQQVAQVDDPDVGPAFVFGPDANSGQVARYHFPSPFFRDFSLLFHVRPATEGA
GVLFAITDAAQAVVSVGVKLSAVRDGQQHIQLLYTEPGATRTRTAASFRLPAFTGQWTRF
ALSVDGATVALFVDCELFQRVPLVRSPRALELEPGAGLFVAQAGGADPSKFQGRIAELRV
RGDPRVSPLHCLEEDDEDSGGVSGDFGSGLEENRELLREQSGLSPKPSLPEAPPVTSPPL
AGGRNVEDSRTEEIEEETTMSPLGAWTLPGSDTVTAWSVRSPGGRPEEGPAGSAVQSPDA
QPIPGPQGPPGPPGPPGKDGAPGKDGEPGDPGEDGKPGDPGPQGFPGTPGDMGPKGEKGD
PGVGPRGPPGPQGPPGPPGPSFRHDRLTFIDMEGSGFGGDLESLRGPRGFPGPPGPPGVP
GLPGEPGRFGMNSSDVPGPAGLPGVPGRDGAPGLPGTPGPPGPPGRDGGPGKTGQKGSPG
QAGAPGPKGSKGDPGPTGAPGETGLAGAPGPAGPPGPPGPPGPPGPGLAAGFEDMDGSGG
PFWSTAHGASGPQGPPGLPGVKGDPGIAGPPGAKGEVGADGPPGFPGLPGREGTAGAQGP
KGEKGTQGEKGDPGRDGVGQPGLPGPPGPPGPVVYVSEQDRAVAGVPGPEGRPGYAGFPG
PAGPKGDLGSKGQRGPPGPKGEKGEPGPVFSPDGGTLGPAQKGAKGEPGFRGPPGPYGRP
GHKGEIGFPGRPGRPGMNGLKGEKGEPGHASVGFGVRGPPGPPGPPGPPGPPGTPVYDSN
AFMESGRPGPPGLPGYQGPPGPKGDKGEVGPPGPPGQFPLDLLQLEAEMKGEKGDRGDPG
QKGERGEPGGGGFFGSSVPGPPGPPGYPGIPGPKGESIRGQPGPPGPQGPPGIGHEGRQG
PPGPPGPPGPPGPPSFPGPYRQTISVPGPPGPPGPPGPPGTMGTSSGQVRIWATYQTMLD
KVPEVPEGWLIFVAETEELYVRVRNGFRKVLLEARTPLPRGTDNEVAALQPPLVQLHEGN
PYPRRELTHSTARPWRADDILAGPPRLPDPRPYPGAPHHGPYLHVQPARPTGGPARTHTH
QDFQPVLHLVALNSPQPGGMRGIRGADFQCFQQARAVGLAGTFRAFLSSRLQDLYSIVRR
ADRTGVPIVNLRDEVLFPSWEALFSGSEGQLKPGARVFSFDGRDVLQHPAWPQKSVWHGS
DPSGRRLTDSYCETWRTEDAAAAGQASSLLAGRLLAQKAASCRNAFIVLCIENSFMTSSS
K
NT seq
5226 nt
NT seq
+upstream
nt +downstream
nt
atggctcgcgaccccggcggccgcctgggccttctgctgctgctgctgctgctcacctat
ggcctcgcggccgcccaggttgacctactgaactggctgtgggcccctaggaccgctggg
cccacggtggaaccggcctccgcgcccccgcgcagcccacacgtgcagcccacggaggag
accgcggctcacgtggccccccgggatgaccccacggagcaggggagagcccctgccagc
cctgagccgcccccggggaggctggagaccggccgggacccggcttccgccgcacccact
gcctccacggcgggcccagacacgaaggaggagaacatcgccggcgtcggagccaagatc
ctgaacgtggcccagggcatccgcagcttcgtccagctgtgggacggcaccactcccagc
cagagctccaccggggcggagacgccagcccctgggacccccacggcccccctcaccctc
ccggggccctctggcgtccccccggaggacgggaccactctctggctgggcagtagggcc
ctgacctctccggatacccagaggaccgaggctggcaccctgccagtgcccacccagctg
cctccctcccctggtgggccccgggcaccgctcagggagccctcggtgccgccatcttct
ccaggtagagcttctctctcctctgcgccgggcggggcccctccccgggggacacagccg
tcctcggggcggccccacgatctggacggcggaggaccctcccccatgtcagcccgtgcc
cgccggcagcgccgactcgctgacagccgcaggcccgcgccacatctgcttccgctggtg
acgggtctcctgggcgcccacgctgcccccttggctctgtcctctgacctccccgccctg
gtgtctccgatcccactcctcgctgtcaccggggacaagggtgcttgggctcctcacgtg
gctaactctgtggggcctggtctcgctaataactccgcgctgcgcggggctgacctgccg
acccccaccgggcagcctgcccgccccgccgccggccgctgcctgcccctgccgccctcc
ctgccggtctgcagtcacctgggcatcgggcgctcctggctgcccaaccacctccggcac
gccagcagcgaggaggtgcgggccgccgcgcgggcgtggggggccctcctccggacgcac
tgccaccgcttcctcgcctggttcttctgcctgctgctggccccgccctgcggtgctggc
ccgctgcccgcccctccgccctgccgccagttctgcgaggccctggaggatgcgtgctgg
agccacctggacgggggcgggctgccggtcacctgtgcctcgctcccggcccaggaggac
ggggtctgcgtgttcattgggccgggtgcagagagcctgggcacggaggtggggctcctg
cagctgctcggagagccgccgccccagcaggtcgcccaggtggacgaccctgacgtcggg
ccggccttcgtcttcggcccggatgccaacagcggccaggtggcccggtaccacttcccc
agcccgttcttccgcgacttctcactgctcttccacgtccggcccgccaccgagggcgcg
ggggtgctgttcgccatcacggacgcggcccaggcggtggtctccgtgggcgtgaagctg
tcggccgtgcgtgacgggcagcagcacatccagctcctgtacaccgagcccggcgccacc
cgcacccgcacggccgccagcttccgcctgcccgccttcaccggccagtggacgcgcttc
gcgctcagcgtggacggcgcgaccgtggcgctgtttgtggactgcgagctgttccagagg
gtgcccttggtgcgctccccgcgggccctggagctggagcccggcgccggcctcttcgtg
gcccaggctggaggagcagaccccagcaagttccagggaaggatcgcggagctgagggtg
cgcggagacccccgggtgagccccctgcactgtctggaggaggacgacgaggacagcggt
ggggtgtctggagacttcgggagcgggctggaggagaaccgggagcttctcagggagcag
tcgggtctgtccccaaagcccagcctccccgaggctccaccggtcacttctccgcccttg
gctggaggcaggaatgtggaagattccagaactgaagaaattgaggaagaaaccacgatg
tctccgttgggagcttggaccctccccggctcagacaccgtcaccgcatggagcgttcgg
agccctgggggccgcccggaagagggtcctgcaggctctgcagtacagagccccgatgca
cagcctatacccgggccacagggccccccgggccccccagggccaccggggaaggacggt
gctcccggaaaggatggtgagccgggcgatcctggtgaagacgggaaacctggtgaccct
gggccacagggcttccccgggaccccaggagacatgggccccaagggcgagaagggggac
cctggagtcgggccaagaggacccccaggaccccaagggcctccggggccaccaggaccc
tccttcagacacgacaggctgaccttcattgacatggaggggtccgggttcggcggtgac
ctggagagtctccgaggcccgagaggcttccccggccccccggggccccccggcgtccca
ggcctgcccggagagccaggccgctttgggatgaacagctccgacgtcccaggccccgca
ggccttcctggagtgcctgggcgggacggggcccccgggcttcctggcaccccgggacct
ccaggtcctccaggaagagacgggggaccaggaaagactggccagaaaggcagccctggc
caagcgggcgccccgggacctaagggaagcaagggggaccctggccccactggcgctcct
ggggagactggcttggcaggagcccccggaccagctggaccaccagggccccccggaccc
cctgggcctccaggaccaggacttgccgcggggtttgaggacatggacggctctggggga
cccttctggtcaactgctcacggagccagcgggccacagggaccaccaggcctgccgggg
gtcaagggggaccctggaatagccggaccaccaggcgccaagggagaagtcggagccgat
ggacctcccgggtttcccggcctccctggcagagagggcacagccggagcccagggaccc
aaaggagaaaaagggacccagggagagaaaggtgacccagggagggatggagtggggcag
cctggcctccccggaccccccgggcccccaggacctgtcgtctacgtgtcggagcaggac
agagcggtggcaggcgtgccgggacccgagggccggccggggtacgcgggctttcctgga
ccggccgggccaaagggagatctgggctccaaaggccagcggggccccccgggacccaag
ggcgagaagggcgagccgggcccagtcttcagccccgatggcggcacgctgggccctgcc
cagaaaggagccaagggagagcccggcttccgaggaccgccgggtccatatggacggccg
gggcacaaaggggagattggcttccctgggcggccgggtcgccccgggatgaacggactg
aaaggcgagaaaggggagccaggacatgccagcgtcggctttggtgtgaggggcccaccc
ggtcccccggggcctccaggacccccaggccctcccgggactcccgtctatgacagcaac
gccttcatggagtctggccgccctggacctccaggattgccagggtaccaggggcctcct
ggaccgaagggtgacaaaggagaagtgggcccaccaggaccaccagggcagttcccgctc
gacctcctccagctggaggctgaaatgaagggggagaagggtgatagaggagacccgggg
cagaagggcgaacggggtgagcccgggggtggcggattcttcggctccagtgtgcccggc
ccccccggcccgccaggctaccctgggattccgggtcccaagggagagagcattcggggc
cagccaggcccacctggacctcaggggccccctggcatcggccatgaggggcgtcagggg
cctcctggcccccccggcccccccgggcccccagggcccccttccttccccggcccttac
aggcagacgatcagtgttcccggccccccaggcccacctgggccccccggaccccctgga
accatgggcacctcctcagggcaggtaaggatctgggccacgtaccagaccatgctggac
aaggtgccggaggttccggagggctggctcatctttgtggctgagacagaggagctgtac
gtccgggtccggaatgggttccggaaggtcctgctggaggcgcggacacccctcccacgt
gggacggacaacgaggtggccgccctacagcccccgctggtgcagctgcacgaaggcaac
ccgtacccccggcgggagctcacccactccacggcgcggccctggcgggcggatgacatc
ctggccggccccccgcgcctgccggacccccggccctaccctggcgccccccaccacggc
ccctacctgcacgtccagccggctcgccccaccggcgggcccgcccgcacccacacccac
caggacttccagcccgtgctccacctggtcgcactcaacagcccccagccgggcggcatg
cgcggcatccggggcgcggacttccagtgctttcagcaggcacgcgccgtggggctggcg
ggcactttccgcgccttcctgtcctcgcggctgcaggacctctacagcatcgtgcgccgc
gctgaccgcacgggcgtgcccatcgtcaacctccgggacgaggtgctgtttcccagctgg
gaggccttgttctccggctccgagggccagctgaagcccggggcccgcgtcttctctttc
gacggcagagacgtcctgcagcatcctgcctggcctcagaagagcgtgtggcacggctcg
gaccccagcgggcgccgtctgaccgacagctactgcgagacgtggcggacagaggacgcg
gcggcggctggccaggcctcctcgctgctggcgggcaggctgctggcgcagaaagccgcg
agctgccgcaacgccttcatcgtgctctgcatcgagaacagcttcatgacctcctcctcc
aagtag
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