Prionailurus bengalensis (leopard cat): 122491541
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Entry
122491541 CDS
T07574
Symbol
CHD1
Name
(RefSeq) chromodomain-helicase-DNA-binding protein 1 isoform X1
KO
K11367
chromodomain-helicase-DNA-binding protein 1 [EC:5.6.2.-]
Organism
pbg
Prionailurus bengalensis (leopard cat)
Brite
KEGG Orthology (KO) [BR:
pbg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pbg03021
]
122491541 (CHD1)
03036 Chromosome and associated proteins [BR:
pbg03036
]
122491541 (CHD1)
Transcription machinery [BR:
pbg03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
SAGA/TFTC/STAGA complex
122491541 (CHD1)
Chromosome and associated proteins [BR:
pbg03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
SAGA complex
122491541 (CHD1)
SLIK complex
122491541 (CHD1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
HTH_CHD1_Hrp3
CDH1_2_SANT_HL1
CHD1-like_C
Chromo
Helicase_C
DEAD
Motif
Other DBs
NCBI-GeneID:
122491541
NCBI-ProteinID:
XP_043450338
LinkDB
All DBs
Position
A1:complement(161000711..161078278)
Genome browser
AA seq
1801 aa
AA seq
DB search
MNGHSDEESVRNSSGESSQSDDDSGSASGSGSGSSSGSSSDGSSSQTGSSDSESGSESGS
QSESESDTSRENKVQAKPPKVDGAEFWKSSPSILAVQRSAMLKKQQQQQQQQHQHQASSN
SGSEEDSSSSEDSDDSSNEVKRKKHKDEDWQMSGSGSPSQSGSDSESEEERDKSSCDETE
SDYEPKNKVKSRKPQNRSKAKNGKKILGQKKRQLDSSEEEDDEEDYDNDKRSSRRQATVN
VSYKEDEEMKTDSDDLLEVCGEDVPQPEEEEFETIERFMDCRIGRKGATGATTTIYAVEA
DGDPNAGFEKNKEPGEIQYLIKWKGWSHIHNTWETEETLKQQNVRGMKKLDNYKKKDQET
KRWLKNASPEDVEYYNCQQELTDDLHKQYQIVERIIAHSNQKSAAGYPDYYCKWQGLPYS
ECSWEDGALISKKFQACIDEYFSRNQSKTTPFKDCKVLKQRPRFVALKKQPSYIGGHESL
ELRDYQLNGLNWLAHSWCKGNSCILADEMGLGKTIQTISFLNYLFHEHQLYGPFLLVVPL
STLTSWQREIQTWASQMNAVVYLGDINSRNMIRTHEWMHPQTKRLKFNILLTTYEILLKD
KAFLGGLNWAFIGVDEAHRLKNDDSLLYKTLIDFKSNHRLLITGTPLQNSLKELWSLLHF
IMPEKFSSWEDFEEEHGKGREYGYASLHKELEPFLLRRVKKDVEKSLPAKVEQILRMEMS
ALQKQYYKWILTRNYKALSKGSKGSTSGFLNIMMELKKCCNHCYLIKPPDNNEFYNKQEA
LQHLIRSSGKLILLDKLLIRLRERGNRVLIFSQMVRMLDILAEYLKYRQFPFQRLDGSIK
GELRKQALDHFNAEGSEDFCFLLSTRAGGLGINLASADTVVIFDSDWNPQNDLQAQARAH
RIGQKKQVNIYRLVTKGSVEEDILERAKKKMVLDHLVIQRMDTTGKTVLHTGSAPSSSTP
FNKEELSAILKFGAEELFKEPEGEEQEPQEMDIDEILKRAETHENEPGPLTVGDELLSQF
KVANFSNMDEDDIELEPERNSKNWEEIIPEDQRRRLEEEERQKELEEIYMLPRMRNCAKQ
ISFNGSEGRRSRSRRYSGSDSDSISERKRPKKRGRPRTIPRETIKGFSDAEIRRFIKSYK
KFGGPLERLDAIARDAELVDKSETDLRRLGELVHNGCIKALKDNSSGTERTGGRLGKVKG
PTFRISGVQVNAKLVISHEEELIPLHKSIPSDPEERKQYTIPCHTKAAHFDIDWGKEDDS
NLLIGIYEYGYGSWEMIKMDPDLSLTHKILPDDPDKKPQAKQLQTRADYLIKLLSKDLAR
KEAQRLSGAGGSKRRKARAKKNKALKSIKVKEEIKSDSSPLPSEKSDEDDDKDEITSVKH
PNKKIKTERDSEERPEPDVFIKKESEEKREAKEKENKRELKREIKEKEDKKDLKEKDFKE
KRENKVKEAIQKEKDIKEEKLSESKSDSKERSKKSSVSDAPVHITASGEPVPISEESEEL
DQKTFSICKERMRPVKAALKQLDRPEKGLSEREQLEHTRQCLIKIGDHITECLKEYTNPE
QIKQWRKNLWIFVSKFTEFDARKLHKLYKHAIKKRQESQQNNDQNSSLNAQVIRNPDVER
LKENTNHDDSSRDSYSSDRHLSQYHDHHKDRHQGDSYKKSDSRKRPYSSFSNGKDHRDWD
HYKQESRYYSDREKHRKLDDHRSRDHRSNLEGSLKDRSHSDHRSHSDHRLHSDHRASSEY
THHKSSRDYRYHSDWQMDHRASSSGPRSPLDQRSPYGSRSPFEHSVEHKSTPEHTWSSRK
T
NT seq
5406 nt
NT seq
+upstream
nt +downstream
nt
atgaatggacacagcgatgaagaaagtgttagaaacagtagtggagaatcaagccagtcg
gatgatgattctgggtcagcttcaggctctggatctggttcaagttctggaagcagtagt
gatggaagcagtagccaaacaggtagcagtgactctgaatctggatctgaatcgggcagt
cagtcagagtctgagtcagacacttcccgagaaaacaaagtccaagcaaaaccaccgaaa
gttgatggagctgagttttggaaatctagccctagtattctggctgttcagagatctgca
atgctcaagaagcagcagcagcagcagcagcagcagcatcagcatcaagcttcatctaat
agtggatcagaagaggattcttcgagcagtgaagattctgatgactcatcaaatgaagtc
aaaaggaaaaaacataaagatgaagattggcaaatgtctgggtcaggatctccatctcaa
tctggctcagattcagaatctgaagaagaaagagataaaagcagttgtgatgaaacagaa
tctgattatgagccaaaaaacaaagttaaaagcaggaaacctcaaaatagatctaaggca
aaaaatggaaagaaaattcttggacaaaaaaagagacagcttgattcatctgaggaggag
gatgatgaagaagattatgataatgataaaagaagttctcgtcgccaagcaactgtcaat
gttagctataaagaagatgaagaaatgaaaacagattctgatgacctactggaagtctgt
ggagaggatgttcctcaacctgaggaagaggaatttgaaacaatagaacgttttatggat
tgtcggattgggagaaaaggagctactggtgctactacaaccatctatgcagttgaagca
gatggtgacccaaatgcaggatttgaaaaaaacaaggaaccaggagagatccagtattta
attaaatggaaaggatggtcccatatccacaatacttgggagacagaagaaacccttaag
cagcagaatgttagaggaatgaaaaaattggataattataagaaaaaagatcaggagaca
aaaagatggttgaaaaatgcttctccagaagatgtggaatattataattgccagcaagaa
cttacagatgatctacacaaacagtatcaaatagtggaacgaataattgctcattccaat
cagaagtcagcagctggttatcccgattattattgcaaatggcagggccttccatactca
gagtgcagctgggaggatggagccctaatttccaaaaagtttcaagcatgcatagatgag
tattttagcaggaatcaatcaaaaaccactccttttaaagattgcaaagtattaaaacaa
aggccaagatttgtagccctgaagaagcagccatcctacattggaggacatgagagttta
gaattaagagattatcaactgaatggtttaaattggcttgctcattcttggtgcaaagga
aatagttgcatacttgctgatgaaatgggccttggaaaaacaatacagacgatctcattt
ctgaactatttgtttcatgagcatcaattatatggaccttttctgttagtagtaccactc
tccactcttacttcctggcaaagggaaattcagacatgggcttctcagatgaatgctgtg
gtctatttaggtgacattaacagcagaaatatgataagaactcatgaatggatgcatccc
cagaccaaacggttaaaatttaatatacttttaacaacttatgaaattttattgaaggat
aaggcattccttggaggtctgaattgggcgtttataggtgtagatgaagcacatcgatta
aagaatgatgactctcttctgtataaaactttaatagactttaaatccaatcaccgtctc
cttattactggaactcctctacagaactcccttaaagagctgtggtctttgctacatttc
attatgccagaaaagttttcttcctgggaagattttgaagaagaacatggaaaaggcaga
gaatatggttatgcaagcctccacaaggagcttgaaccatttctgttacgcagagttaaa
aaagatgtggaaaaatctcttcctgccaaggttgagcagattttaagaatggaaatgagt
gctttacagaaacagtattacaaatggatattaactaggaattacaaagccctcagcaaa
ggttccaagggcagtacctcaggctttttgaacattatgatggagctaaagaaatgttgt
aaccattgctacctcattaaaccaccagataataatgaattctataataaacaggaggcc
ttacaacacttaatccgtagtagcggaaaattgattcttcttgacaaactgttaattcgc
ctaagagaacgaggcaatagagttcttattttttctcaaatggtgcggatgttagacata
cttgcagaatatttgaaataccgtcaattcccctttcaaagattagatggatcaataaaa
ggggagctgagaaaacaagcactagatcattttaatgctgaaggatcagaggatttctgc
tttttgctttccacaagagctggaggtctaggaattaatttagcctctgctgatactgtt
gttatatttgattccgattggaatccacaaaatgatcttcaggcacaggctagagctcat
cgaattgggcagaagaaacaggtgaatatttatcgtctagttactaagggatcagttgaa
gaggatattcttgaaagggccaaaaagaagatggttttagatcatcttgtgattcagaga
atggacacaactgggaagacagtactacatacaggttctgccccgtcaagttctactcct
ttcaataaagaagaattatcagctatcttaaagtttggtgctgaggaactttttaaggaa
cctgaaggagaagaacaagaaccccaggaaatggatatagatgaaatcttgaagagggct
gaaactcatgaaaatgaaccaggccctttaactgtaggagatgaattgctttcccagttc
aaggttgccaacttttcaaatatggatgaggatgacattgagttggaaccagaaagaaat
tcaaagaattgggaggaaataattcctgaagatcaacgaagacgattagaagaggaagaa
agacaaaaggaacttgaagaaatttatatgctcccaagaatgagaaactgtgcaaaacag
attagttttaatggaagtgaagggaggcgcagtagaagtaggagatattctggatctgat
agtgactcgatctcagaaaggaaaaggccaaagaaacgtggaagaccacggactatcccc
cgggagactatcaaaggatttagtgatgcagaaattcggcggtttatcaagagttacaag
aagtttggtggccctctggaaagattagatgcaattgctcgggatgctgaattagttgat
aagtcagagaccgacctcagacgactaggagaattggtacataacggttgcattaaagct
ctaaaggataattcttcaggaacagaacgaacaggtggtagacttggaaaagtgaagggt
ccaacattccgaatatcaggagtacaggtgaatgccaagctcgtcatctcccatgaagaa
gaattgataccattgcataaatccattccttcagatccagaagaaagaaaacagtatact
atcccatgccatacaaaggcagctcattttgatatagactggggcaaagaagatgattcc
aatttgttaattggtatctacgaatatggatatggaagctgggaaatgattaaaatggat
cctgacctcagtctaacacacaagattcttccagatgatcctgataaaaaaccacaagca
aagcagttgcagacacgtgcagactacctcatcaaattacttagtaaagatcttgcaaga
aaagaagctcagagactttctggtgcaggaggttcaaagaggagaaaagcaagagctaag
aagaataaagcattgaagtctataaaagtgaaagaagaaataaagagtgattcttcaccc
ttgccctcagagaagtctgatgaagatgatgataaggatgagatcacttctgtgaaacat
ccaaataaaaaaattaaaacagaaagagacagtgaagaaagacctgagccagatgttttt
ataaagaaggaatcagaagaaaagagggaagcaaaagaaaaagagaataaaagagaactt
aaaagggagataaaagaaaaagaggataagaaagatttaaaggaaaaagattttaaagag
aaaagagaaaacaaagtaaaagaagctatacagaaagaaaaagacataaaggaagaaaag
ttgagtgaatccaagtctgatagcaaggaaagatccaagaaatcttcagtgtcagatgct
ccagttcatatcacagcaagtggtgaaccagttcccatatctgaagaatctgaagagcta
gatcagaagacattcagcatttgtaaagaaagaatgaggcctgtcaaagcagctttgaaa
caacttgataggcctgaaaaaggcctttcagaaagagaacaactggagcatactagacag
tgtttaataaaaattggagaccatatcacagaatgtctgaaagagtatacaaatcctgaa
caaatcaagcagtggagaaaaaacctgtggatttttgtatctaagtttacggagttcgat
gcaagaaaattacataagttatataagcatgctattaaaaaacggcaggaatctcagcaa
aataatgaccagaacagcagcctgaatgctcaagtaattagaaatccagatgtggaaaga
ttaaaagagaatacaaatcacgatgatagcagcagggacagttattcatctgatagacac
ttatctcagtatcatgatcatcataaagaccgacatcagggagattcttacaaaaagagt
gactctaggaaaagaccctattcttcctttagtaatggcaaagatcatcgtgactgggat
cattacaagcaagaaagcaggtattatagtgatagagagaaacacagaaaactggatgat
cacaggagtagagatcacaggtcaaatttggaaggaagtttaaaggacagatctcattct
gatcatcgttctcattcagaccatcggttgcattcagaccatcgggcaagttctgaatat
acacaccataaatcttccagggattataggtatcactcagattggcagatggaccacaga
gcttccagtagtggccccagatcaccactagatcagaggtctccttatggctccagatct
ccatttgaacactcagttgaacacaaaagtacacctgagcatacctggagtagtcggaaa
acataa
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integrated database retrieval system
