Prionailurus bengalensis (leopard cat): 122491975
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Entry
122491975 CDS
T07574
Symbol
TOPBP1
Name
(RefSeq) DNA topoisomerase 2-binding protein 1 isoform X1
KO
K10728
topoisomerase (DNA) II binding protein 1
Organism
pbg
Prionailurus bengalensis (leopard cat)
Pathway
pbg03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
pbg00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
122491975 (TOPBP1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pbg03032
]
122491975 (TOPBP1)
03400 DNA repair and recombination proteins [BR:
pbg03400
]
122491975 (TOPBP1)
DNA replication proteins [BR:
pbg03032
]
Eukaryotic type
DNA Replication Initiation Factors
Other initiation factors
122491975 (TOPBP1)
DNA repair and recombination proteins [BR:
pbg03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
BRCA1-B complex
122491975 (TOPBP1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BRCT
PTCB-BRCT
TopBP1_BRCT0
BRCT_2
RTT107_BRCT_5
LIG3_BRCT
BRCT_TopB1_SLF1
ECT2_BRCT0
DUF5568
Motif
Other DBs
NCBI-GeneID:
122491975
NCBI-ProteinID:
XP_043451307
LinkDB
All DBs
Position
C2:130079090..130140780
Genome browser
AA seq
1514 aa
AA seq
DB search
MSRNDKEPFLVKFLKSSDNTECFFKALESIKEFQSEEYLQIITEEEALNMKENDRSLYIC
DPFSGNVFDHLKKLGCRIVGPQVVIFCMHHQRCVPRAEHPVFNMVMSDVTVSCTSLEKDK
REEVHKYVQMMGGRVYRDLNISVTHLIAGEVGSKKYLVAANLKKPILLPSWIETLWEKSQ
EKKIARYTDINMEDFKCPIFLGCTICVTGLCGSERKAIQRLTVKHGGQYMGQLKMNECTH
LIVQEPKGQKYECAKKWNVHCVTTQWFFDSVDKGFCQDESIYKTEPQPETKTVPDTSTPT
GQINTVDSRTLSDVSHISNINASCISESICNSVLNSKVEPTLENLENLDVSAFQAPEDLL
DGCRIYLCGFSGRKLDKLRRLINSGGGVRFNQLNEDVTHVIVGDYDDELKQFWDKSAHRP
HVVGAKWLLECFSKGYILPEEPYIHANYQPVEIPVSDKPESQTAPLKKNNSSSKKDSTPD
GKHEQADEDLLSQYVNNNTTAVEAAKSEVEPFNDSTHISLQEENQSSVTHCHPDASTITE
EGLFSQKSFLVVGFSSENESNIANVIRENAGKIVSLQSRIVADYAVVPLLGCEVQATVGE
VVTNTWLVTCIDYQTLVDPKSNPLFVPVSVMAGMTPLEGCVISFSQCAGAEKDSLIFLAK
RLGASVQEYFVRKSNAKKGMFASTHLVLKEPSGSKYEAAKKWNLPAVNISWLLETARTGK
RASESHFLIEKSTKEEQGLETEITNRVNVSPDTAEHPVTHLNTHRKTAVTPLDMNSFQSK
AFHAVISQHTKQVSVSPPVGQPLQKEPSLHLDTPSKFLSKDKLFKPSFDVKDALAALETP
GGPSQQKRKLSTPLSEVIVRNLKLAVANSSRNAVALSASPQLKDAQSKKEQEEAPKPLHK
VVVCVSKKLSKKQSELNGIAASLGADYRWSFDETVTHFIYQGRPNDTNREYKSVKEKGVH
IVSEHWLLECAQEYKHLPESLYPHTYNPKMSLDISTVQDGRLCNSRLLSADSATKDDEPD
HLPVEENDIDNMTTSNKELVTSNGDGRNDSKGALTQTLEMRENFQKQLQEIMSATSIVKP
QGQRASLSRSGCNSTSSTPDSSRSARSGRSRVLEALRQSRQTVPDVNTEPSQNEQIIWDD
PTAREERARLASNLQWPSCPTQYSELQVDIKKLEDSPFQEPLHDAETAEQAVCDSGNMCV
TEAPKHPISEELETPVKDSHLIPTPQAPSIAFPLANPPVAPHPREKTITIEETHEDLKKQ
YIFQLSSLNPQERIDYCHLIEKLGGLVIEKQCFDPSCTHIVVGHPLRNEKYLASLAAGKW
VLHRSYLEASRTAGHFVPEEDYEWGSSSILDVLTGITVQQRRLALAAMRWRKKIQQRQES
GIVEGAFSGWKVILHLDQSREAGFKRLLQSGGAKVLPGHSVPLFKEATHLFSDFSKLKQD
DSGVNIAEAAAQNVYCLKTDYIADYLTQESPPQVENYCLSETISFLQNKEPGPGSSQKRK
APTEKNKLKRPRVN
NT seq
4545 nt
NT seq
+upstream
nt +downstream
nt
atgtccagaaatgacaaagaaccgtttcttgtgaagtttttaaagtcttcagacaatacc
gaatgtttttttaaagctcttgagtcaataaaagagttccaatcagaagaatatcttcag
attattacagaagaagaggcattaaacatgaaggagaatgataggtcactttatatctgt
gacccatttagtggcaatgtctttgatcacctcaaaaagcttggctgcagaattgttggc
cctcaagtagtcatattttgtatgcaccaccagcgatgtgtcccaagagccgaacatcca
gtttttaatatggttatgtctgatgtaactgtatcttgtacaagcctggaaaaagacaaa
agggaagaagttcataaatatgtacaaatgatgggtggacgcgtatacagagatcttaat
atatcagtaactcaccttattgcaggagaagttggcagcaaaaaatatttagttgctgca
aacctaaagaaacctattttgcttccttcttggattgaaacactttgggagaagtcacaa
gagaaaaaaatagccagatatactgatataaacatggaagacttcaagtgtcctattttt
cttggttgcacaatctgtgtgactggcttgtgtggctcagaaagaaaggcaattcagcga
ctcacagttaagcatggaggtcaatacatgggacaactgaaaatgaatgaatgtacacac
ctcattgtgcaagaaccgaaaggtcaaaaatatgaatgtgccaagaaatggaatgtacac
tgtgtgaccacacagtggttttttgacagtgttgacaaaggtttttgtcaggatgaatcc
atatacaagacagagcctcaaccggaaacaaagactgtacctgatacttcaactcctact
ggccagatcaacacagttgatagtcgtactctttcggatgtcagccatatttccaacatc
aatgcaagttgcataagtgaatcgatatgtaattcagttcttaatagcaaagtggagcct
acacttgaaaatctagaaaatctggatgtcagtgcatttcaagcacctgaagatttacta
gatggttgtcggatatatctttgcggttttagtggcagaaagctagataaactgagaagg
cttattaacagtggaggtggagttcgttttaatcagctcaatgaagatgtaactcatgtt
attgtgggagattatgatgatgaattgaagcagttttgggataaatcggctcacaggcct
catgtagtgggagcaaaatggttgctagagtgttttagtaaaggttatatacttcctgaa
gagccatatatccatgctaactaccaaccagtggaaattccagtttcggataaacctgaa
agtcaaacagcccctttaaaaaagaacaacagctcctccaagaaggactctactcctgat
ggaaaacatgaacaagctgatgaagatctcctctctcagtatgtaaataataacacaaca
gcggttgaagctgccaagtctgaagttgagccctttaatgactctactcatatttccctg
caagaagaaaaccagtcttctgtcactcattgccatcctgacgcttctacaattactgaa
gaaggtttatttagccaaaagagtttccttgttgtgggttttagtagtgaaaatgaatct
aatattgcaaacgtcataagagaaaatgctggaaaaattgtctcccttcagagcagaatt
gttgctgattatgctgtggttcctctgctggggtgtgaagtacaagcaactgtaggagaa
gtcgttacaaatacgtggctggtaacttgcatagactatcagactttagttgatccgaag
tcaaatcctctcttcgtgccagtctcagtaatggcaggaatgactcctttagagggttgt
gttatttcattcagccagtgtgcaggagccgaaaaagattcgttgatattcttagcaaaa
cgccttggagcaagcgttcaagaatactttgttcgcaaatccaatgcaaagaaaggcatg
tttgccagtacacatcttgtattgaaggaaccaagtggttctaaatacgaagctgccaag
aagtggaatttaccggcagtcaacatatcatggctattggagactgctagaacgggaaag
agagcaagtgaaagccattttctgattgaaaagtcaactaaagaagaacaaggtttggaa
actgaaataacaaacagggtgaacgtaagcccagatactgcagagcatcctgtcacacac
ctgaacactcacaggaaaacagccgttacacctttagatatgaacagctttcagagtaaa
gctttccatgccgtgatctcccaacacaccaaacaagtgtctgtgtccccaccagtagga
cagccgcttcagaaggaaccctccttgcatctggatacaccatcaaaatttctgtccaaa
gacaaactcttcaagccttcctttgatgtgaaggatgcacttgcagccttggaaactcca
ggaggtcccagccaacagaaaaggaaactgagtacaccactttcagaagtcattgtcaga
aacttgaaacttgctgtggcaaacagctcccgaaatgctgttgctctttctgccagccct
cagctgaaggatgcccagtccaagaaggaacaggaagaagctccaaagccacttcacaag
gtagtggtatgtgttagtaagaaactcagtaagaagcagagtgagctgaatgggattgca
gcctctctaggagcagattacagatggagttttgatgaaacggtgactcatttcatttat
caaggccgaccaaatgacactaaccgagaatataaatctgtaaaagaaaaaggagtacac
attgtttcagagcactggcttttagaatgtgcccaagagtataagcatcttcctgaatct
ctttatccacatacttacaatcccaaaatgagcttggatatcagtacagtgcaagatggc
agactctgtaatagtcgactgctctcagctgattcagcaacaaaggatgatgagccagat
catttgcctgtagaagaaaatgacatagacaatatgaccaccagtaataaagaattagta
acatcaaatggagatggaaggaatgactctaaaggagctctgacacagacattggagatg
agagagaactttcagaagcagctgcaggagatcatgtccgcgacgtcaatagtgaaaccc
caagggcagagggcttccctttcaagaagtggttgtaacagcacttcttcaacccctgat
agcagtcgctctgcccgcagtgggcgaagtagagtcctggaggcactgaggcagtctcgt
caaacagtacctgatgtcaacacggagccctcccagaatgaacagatcatttgggacgac
ccaacagccagggaggagagagcacggcttgccagcaatctgcagtggcctagttgtccc
acacagtattctgagcttcaggttgacattaaaaaattggaggattctcctttccaggag
cctttacatgacgcagaaactgctgaacaggctgtctgtgattccggaaacatgtgtgta
actgaagccccaaaacacccaatctctgaagaactggaaacaccagttaaagacagccac
ctgatccctacacctcaagcccccagtattgccttccccctggccaacccaccggtggct
ccacaccctagagaaaagactataacaatagaggaaactcatgaagacctaaaaaaacag
tacatatttcagttgtcatctctgaatcctcaagaacgtattgattattgtcatctgatt
gaaaaactaggtggactagtaatagagaagcagtgctttgatcccagttgtacacacatt
gttgtgggacatccacttcgaaacgagaagtatttagcttcattggcagctgggaagtgg
gtgcttcatcgctcctacctggaagcatcccggactgctgggcacttcgtgccggaagaa
gactacgaatggggaagtagttccatacttgacgttttgactggaatcactgtacagcaa
cgaagactagcacttgcagcaatgagatggagaaaaaaaatccagcaaagacaagaatcg
ggcattgttgagggggcatttagtgggtggaaggtcatcttacatcttgaccagtcccga
gaagcaggattcaaacgccttcttcagtcaggaggagcgaaggtgctacctggtcattct
gtacctctatttaaagaggccacacatctcttctctgacttcagtaaactgaaacaagat
gactcaggagttaacatagcagaggctgctgcccagaatgtgtactgcctgaaaacagat
tacattgctgattatctgacgcaggaatcccctcctcaagtagaaaactactgtctatca
gaaactatttcatttcttcagaataaggaacctgggcctggatcatcacagaagaggaaa
gctcctacagagaaaaacaaactcaaacgacctagagtaaactaa
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integrated database retrieval system
