KEGG   Prionailurus bengalensis (leopard cat): 122492047
Entry
122492047         CDS       T07574                                 
Symbol
THOC3
Name
(RefSeq) THO complex subunit 3
  KO
K12880  THO complex subunit 3
Organism
pbg  Prionailurus bengalensis (leopard cat)
Pathway
pbg03013  Nucleocytoplasmic transport
pbg03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:pbg00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    122492047 (THOC3)
  09122 Translation
   03013 Nucleocytoplasmic transport
    122492047 (THOC3)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:pbg03019]
    122492047 (THOC3)
   03041 Spliceosome [BR:pbg03041]
    122492047 (THOC3)
Messenger RNA biogenesis [BR:pbg03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    TREX complex
     122492047 (THOC3)
Spliceosome [BR:pbg03041]
 Complex C
  Other components
   EJC/TREX
    122492047 (THOC3)
 Other splicing related proteins
  Spliceosome associated proteins (SAPs)
   TREX complex
    122492047 (THOC3)
SSDB
Motif
Pfam: WD40_CDC20-Fz WD40 Beta-prop_EML_2 WD40_Prp19 WD40_WDHD1_1st ANAPC4_WD40 WDR55 EIF3I Beta-prop_CAF1B_HIR1 Beta-prop_WDR19_1st Beta-prop_RIG_2nd Beta-prop_WDR90_POC16_2nd Beta-prop_TEP1_2nd WD40_MABP1-WDR62_2nd Beta-prop_IFT140_1st Beta-prop_EML eIF2A Beta-prop_IFT122_1st Beta-prop_Vps41 Beta-prop_TEP1_C WD40_RFWD3 Beta-prop_WDR35_TULP_N WD40_MABP1-WDR62_1st RMC1_N Beta-prop_HPS5 NBCH_WD40 WDR90_beta-prop_4th Beta-prop_EIPR1 B-prop_COPA_B_2nd Beta-prop_WDR75_1st Beta-prop_SPT8 PD40 Beta-prop_NUP159_NUP214 Beta-prop_Nup120_160 Beta-prop_NWD2_C Peptidase_S9_N Cytochrom_D1 DPPIV_N Beta-prop_ELP1_1st Beta-prop_WDR11_1st Beta-prop_DCAF4
Other DBs
NCBI-GeneID: 122492047
NCBI-ProteinID: XP_043451454
LinkDB
Position
A1:175202050..175220062
AA seq 351 aa
MAVPAAAMGPSALGQSGPGSMAPWCSVTSGPTRYVLGMQELFRGHSKTREFPAHSAKVHS
VAWSCDGRRLASGSFDKTASVFLLEKDRLVKENNYRGHGDSVDQLCWHPSNPDLFVTASG
DKTIRIWDVRTTKCIATVNTKGENINICWSPDGQTIAVGNKDDVVTFIDAKTHRSKAEEQ
FKFEVNEISWNNDNNMFFLTNGNGCINILSYPELKPVQSINAHPSNCICIKFDPMGKYFA
TGSADALVSLWDVDELVCVRCFSRLDWPVRTLSFSHDGKMLASASEDHFIDIAEVETGDK
LWEVQCESPTFTVAWHPKRPLLAFACDDKDGKYDSSREAGTVKLFGLPNDS
NT seq 1056 nt   +upstreamnt  +downstreamnt
atggcggttcctgcggcggccatggggccctcggcgctgggccagagtggtcctggctca
atggctccctggtgctcagtgaccagcggcccaacacgctacgtgctgggaatgcaggag
ctgtttcgcggccacagcaagacgcgcgagttccctgcgcatagcgccaaggtgcactcg
gtggcctggagctgcgacgggcgtcgccttgcctcggggtccttcgacaagacggccagc
gtattcctgctggagaaggaccggttggttaaagaaaacaattatcggggacatggggat
agtgtggaccagctttgttggcacccaagtaatcctgacctctttgtcactgcgtctgga
gacaaaaccattcgcatctgggatgtgaggacgacgaaatgcattgccaccgtgaacact
aaaggggagaacattaatatctgctggagtcccgatggacagaccattgctgtgggcaac
aaggatgatgtggtgacctttattgatgccaagacacaccgttccaaagcggaggagcag
ttcaagtttgaagtcaatgaaatctcttggaataatgacaataacatgttctttctgaca
aatggcaatggttgtatcaacatcctcagctacccagagctgaagcctgtgcagtccatc
aatgcccatccttccaactgcatctgcatcaaatttgaccccatggggaagtactttgcc
acaggaagtgcagatgctttggtcagcctttgggatgtggatgagttagtgtgtgttcgg
tgcttttccaggctggattggcctgtgaggaccctcagttttagccatgatggaaaaatg
ctggcatcagcttcagaagatcattttattgacattgctgaagtagagacaggagacaag
ctatgggaggtgcagtgtgagtccccgaccttcaccgtggcttggcaccccaaaaggcct
ctgctggcatttgcctgtgatgacaaagatggcaaatatgacagcagtcgggaagcagga
actgtgaagctgtttgggcttcctaatgactcctga

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