Prionailurus bengalensis (leopard cat): 122492142
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Entry
122492142 CDS
T07574
Symbol
SCN11A
Name
(RefSeq) LOW QUALITY PROTEIN: sodium channel protein type 11 subunit alpha
KO
K04843
voltage-gated sodium channel type XI alpha
Organism
pbg
Prionailurus bengalensis (leopard cat)
Brite
KEGG Orthology (KO) [BR:
pbg00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
pbg04040
]
122492142 (SCN11A)
Ion channels [BR:
pbg04040
]
Voltage-gated cation channels
Sodium channel, voltage-gated (Nav)
122492142 (SCN11A)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Ion_trans
Na_trans_assoc
IQ_SCN5A_C
PKD_channel
GPHH
Motif
Other DBs
NCBI-GeneID:
122492142
NCBI-ProteinID:
XP_043451654
LinkDB
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Position
C2:152908252..152993979
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AA seq
1786 aa
AA seq
DB search
MKMDDRCYPVIFPDERNFRPFTSDTLATIEKRIAIQKEKKKCKDQTPAEPQPRPQLDLKV
SRKLPKLYGNIPHELIARPLEDLDPFYRNHKTFMVLNKKRTIYRFSANRALFIFGPFNPI
RSLAIRISVHSLFSMFIICTVIINCVFMATACGKDNSNIYTDNAEYVFTGIYIFEALIKI
LARGFVLDEFSFLRDPWNWLDSIVITTAFVSYSPSIRASGISLSSLRTFRVFRALKAISV
VSGLKVIVGALLRSVKKLVDVMILTLFCLSIFALVGQQLFKENLNQRCVRKDCKDMDNLD
DHCFEKKDSTEFRICGSWMGESACSEQFQCNHTKRNPDYNYTNFDNFGWSFLSMFRLITQ
DSWEKLYQQTLRTSGLFSVFFFVVVIFLGSFYLINLTLAVVTMAYEEQNRNVAAETEAKE
KMFQEAQRLLKEEKEALVAMGIDRSSLNSLEASSFSPKKRKLFGNRKRKSFFLRDSGKDQ
PPESDSDEDSTKKPHILEQTKRLSQNLSVDFCDEHGDPFQRQRALSAVSILTITMQEQEK
SQEPCLPCGGNVASRYLVWNCSPQWLCVKKTLRVVMTDPFTELVITICIVINTVFLALEH
YKMDQSFEYMLYTGNLVFTGIFMAEMCLKIIALDPYNYFRRGWNIFDSIVALLSFADVMN
SVVVGKQSPLFFHSLRVLRVFKLAKSWPTLNTLIKIIGHSVGALGNLTVVLAIVVFIFSV
VGMQLFGSKFNSVRNNTKACGPTVPCLRRWHMGDFYRSFLVVFRILCGEWIENMWECMQE
TSKPLCVVVFLLIMVIGKLVVLNLFIALLLNSFSNEEKDGSLDGEAXKTKVQLALDRFHR
AFCFVIRTLARFCHTWCRRQTLPQQKEVSGGPPAKSKDIIPLVAGVKRGSETWEEFGVVT
SAPKTLSVEHDRTWLAPLAEEEDDFESSGKINPQCVAPPEAGKQAYELPQETKTSTSPGA
QSVEIDVFSEGDIYLSAQNPRKKSDTTSVFSECSTIDPQDPFARVPEMVPKKEPERCFPK
GLGHCFPCCATDKRKSHWIIWWNLRKTCYQIVKHSWFESFVIFVILLSSGALVFEDIHLE
KRPNIQALLNCTDHIFTYIFILEMGLKWVAFGFGKYFTSVWCWLDFIIVIVSVTSLIDLK
SLKSFRTLRALRPLRALSQFEGMKVVVNALIGAIPAILNVLLVCLIFWLIFCILGVNFFS
GKFGRCINVSDTNSVINYSVVANQSQCESGNFSWVTPPVNFDNVGMAYLALLQVATFKGW
MDIMYAAVDSRGKELQPGFEENPQNYLFFVAFIIFGSFFTLNLFIGVIIDNFNQQQKKLG
GEDIFMTEEQKKYYNAMKKLGSKKPQKPIPRPLNKCQGLAFDLVTNQVFDVIIIILIFLN
MVIMMAESNNHPEATKAILEELNLAFVVIFTIECLIKVFALRQYYFTNGWNLFDCVIVVL
SIVSAMVSALENQQHIPFPPTLFRVVRLARIGRILRLVRAARGIRTLLFALMMSLPSLFN
IGLLLFLVMFIYAIFGMNCFCKVKEGFGIDDIFNFKTFVGSILCLFQITTSAGWDALLRP
MLQSNDSCNPNLDSRHLPAIAIAYFVSYIIISFLIVVNMYIAVILENFNTATEESEDPLG
EDDFEIFYEVWEKFDPEATQFIKYPALSDFADALPEPLRVAKPNRFQFLMMDLPMVSGDR
LHCLDILFAFTTRVLGDSSGLDSMKAMMEEKFMEANPSKKLYEPIVTTTKRKEEERCAAV
IQKAFRKYKLKMSMCALEDGPRSPLQTLCNGDLSSSGVAEGKVHYD
NT seq
5361 nt
NT seq
+upstream
nt +downstream
nt
atgaaaatggatgacaggtgctacccggtgatctttccagatgaacgaaatttccgtccc
ttcacttcggacaccctggctacaattgagaagcggattgccatccaaaaggagaaaaag
aagtgcaaagaccagacaccagcagaaccccagcctcggcctcagcttgacctaaaggtc
tccaggaagttgcccaaactctatggcaacattccccatgagctgatagcaaggcccctg
gaagacttggacccgttctacagaaatcataagacgtttatggtgttgaacaaaaagagg
accatctatcgcttcagtgccaatcgtgccttgttcatatttgggcctttcaatccaatc
cgaagtttagccattaggatctcagtccattcattgttcagcatgttcatcatctgcacc
gtcatcatcaactgcgtgttcatggccactgcctgtgggaaggacaacagcaacatatat
accgacaacgccgagtatgtcttcactgggatttatatttttgaagctttgataaaaata
ttggcaagaggttttgttctggatgagttttcttttcttcgagatccatggaactggctg
gactccattgtcattacaacagcgtttgtatcatactcaccaagtatcagggccagtggc
atcagtctgtcgtccctacgtaccttccgggtgttcagagctttgaaagcgatttcggtg
gtttcaggtctgaaggtcatcgttggggccttgctgcgctctgtgaagaagcttgttgac
gtgatgatcctgactctcttttgcctcagcatcttcgccctggtaggtcagcagctcttt
aaggaaaatctgaaccagagatgtgtcaggaaggactgtaaggatatggataaccttgac
gaccattgctttgaaaagaaagattccactgaattcagaatatgtggcagctggatgggt
gaaagtgcctgttctgaacaatttcagtgcaaccacaccaaaaggaatcctgactataat
tataccaattttgacaactttggctggtcttttctgtccatgtttcggctgataacccaa
gattcctgggagaagctttatcaacagaccttgcgtacctcagggcttttctcagtcttc
ttcttcgtggtggtcatcttcctgggctccttctacctgattaacttaaccctggctgtt
gtcaccatggcttacgaggagcagaacagaaacgtagctgccgagaccgaggccaaggag
aagatgttccaggaagcccagcggctgctgaaggaggaaaaggaggctctggttgccatg
ggaattgacagaagttcacttaattcccttgaggcatcatctttttccccaaagaagaga
aagctatttggtaataggaaacgaaagtcctttttttttgagagactctgggaaagacca
gcctccagaatcagattctgatgaagattccacgaaaaagccacacatcctagagcaaac
caaacggctgtcccagaatctgtcagtggatttctgtgatgagcacggggaccccttcca
aaggcagagggccctgagtgccgtcagcatcctcaccatcaccatgcaggagcaagaaaa
atcacaggagccttgcctcccatgtgggggaaacgtggcgtccagatacctcgtgtggaa
ctgcagcccccagtggctgtgtgttaagaagaccctgcgagtcgtgatgaccgacccctt
tactgagctggtcatcaccatctgcatcgtaatcaacactgtcttcttggccttggagca
ttacaaaatggaccagagttttgagtatatgttgtatacggggaatttggttttcactgg
cattttcatggcagaaatgtgcctaaaaatcatcgcgctcgatccctacaactacttccg
ccgaggctggaacatttttgacagcatcgtcgctcttctgagttttgcagatgtgatgaa
cagtgtagtcgtaggaaaacaaagccctctgtttttccattccttaagagtgctaagggt
tttcaagttagccaaatcctggccgactttaaacacactgataaagataattggtcactc
cgtcggagccctgggaaacctgaccgtggtcctggccattgtggtcttcattttctcagt
agttggcatgcagctttttggctctaaattcaattctgtaaggaataacaccaaagcctg
tggccctacagtcccatgtttacgacgctggcacatgggggacttctaccgttcctttct
ggtggtattccgcatcctctgtggggaatggatcgaaaacatgtgggaatgtatgcaaga
aactagtaaaccactgtgcgtcgtcgtctttctgttgatcatggtgataggaaaactcgt
ggtactcaacctcttcattgccttgctgctcaattccttcagtaatgaggagaaggatgg
aagcttggatggagaggccaaaaaaccaaagtccagttagccctggatcggttccaccgg
gctttttgctttgtaatccgtactcttgcgcgtttttgtcacacgtggtgcaggaggcaa
acgttaccgcagcaaaaagaggtgtcgggaggccctcctgccaaaagcaaagacatcatt
ccactggtcgcaggggtgaaaaggggctcggagacctgggaggagttcggtgtagtcacg
tctgcaccaaagaccttgagtgtggagcatgaccggacttggttggccccacttgcagag
gaagaggatgattttgaatcttctgggaaaatcaacccacagtgcgttgcaccacctgag
gctggcaaacaggcctatgaactccctcaggagaccaagacgtctaccagcccaggagct
caaagtgtggaaattgatgtgttctctgaaggtgacatttatctgtcagcacagaacccc
cgaaagaagtctgataccaccagtgttttctcagaatgtagcaccattgatccacaggat
ccttttgcaagggtaccggaaatggttcccaaaaaagaaccagagagatgttttcccaaa
ggcctgggtcactgcttcccatgctgtgccacggacaagagaaagtcccactggatcatt
tggtggaacctgcggaaaacctgctaccaaatagtgaaacacagttggtttgagagcttt
gttatctttgtgattctgctgagcagtggggcactggtatttgaagatattcaccttgag
aaacgacccaatatccaagcattacttaattgtactgaccatattttcacatacattttt
atcctggagatgggtctaaaatgggtggcctttggatttgggaagtatttcaccagtgtc
tggtgctggcttgacttcatcattgtaattgtctctgtgaccagtctcatcgacctaaag
agcttgaagtccttcaggactctacgagcactgaggcccctgcgcgcactgtcccagttt
gaaggaatgaaggtggtcgtcaatgctctcataggtgccatacctgccattctgaatgtt
ttgcttgtctgcctcattttctggctcatattttgtatcctgggagtaaacttcttctct
ggaaaatttggaagatgcattaatgtatcagatacaaactcagttataaattacagcgtt
gtggcaaaccaaagtcaatgcgaaagtggaaatttctcttgggtcaccccgccggtcaac
tttgacaatgtgggaatggcctaccttgccctcttgcaagtggcaacatttaagggctgg
atggatatcatgtacgcagctgtcgactccagagggaaagaactacagccagggtttgag
gagaacccacaaaactaccttttcttcgtggcttttatcatctttggctcattctttact
ctgaatctcttcatcggtgttattattgacaacttcaaccaacagcagaaaaagttaggt
ggtgaagatatttttatgacagaagaacagaagaaatactataatgcaatgaaaaaatta
ggatccaaaaaacctcaaaagcccattccgaggcctctgaataaatgccagggtctcgcg
ttcgacctggtcacaaaccaggtctttgacgtcatcatcatcatcctcattttcctcaac
atggttatcatgatggccgaatcaaataaccatcccgaagccacaaaagccatccttgag
gagctcaacctggcctttgtggtcatctttacaattgagtgtctcatcaaagtctttgct
ctgaggcaatactacttcaccaatggctggaacttattcgactgtgtgatcgtggttctc
tctattgttagtgccatggtttctgccttggagaaccagcagcacattcccttccctccg
acgctcttcagagttgtgcgcttggctcggattggtcggatcctgagacttgttcgggca
gcacgaggaattagaaccctcctttttgctctgatgatgtcccttccctctctattcaac
atcggtcttctgctttttctggttatgtttatctatgccatttttggtatgaactgcttt
tgcaaagtgaaggaagggtttggaattgatgacatattcaacttcaagacttttgttggc
agcatactctgtctcttccagatcaccacctcggcaggctgggatgccctcctcaggccc
atgctgcaatcaaatgattcatgcaaccccaacttagacagccgtcacctccctgccata
gccatagcctactttgttagttacatcatcatttccttcctcattgttgtcaacatgtac
attgctgtgatcttagagaacttcaatactgccactgaagaaagcgaggaccctttgggt
gaagatgactttgaaatattctatgaagtctgggaaaagtttgacccagaagcaacacag
tttatcaagtatcctgccctttctgactttgccgatgcccttcctgagcctttacgggtg
gcaaagccaaacagatttcagttcctaatgatggacttgcccatggtgagtggagatcgc
ctccactgcctggatattctcttcgcgttcaccactagggtacttggtgactccagcggc
ctggacagcatgaaagcaatgatggaggagaagttcatggaggccaacccttccaagaag
ttgtatgaacccatagtcaccaccaccaagaggaaggaagaggaaagatgtgctgctgtt
attcaaaaggcctttcgaaaatacaagctgaagatgtccatgtgtgccttagaagacggg
cctcgctcaccactccagacactctgcaatggagacctctccagctccggggtggccgag
ggcaaggtccactacgactga
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