Prionailurus bengalensis (leopard cat): 122494440
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Entry
122494440 CDS
T07574
Symbol
SF3B3
Name
(RefSeq) splicing factor 3B subunit 3 isoform X1
KO
K12830
splicing factor 3B subunit 3
Organism
pbg
Prionailurus bengalensis (leopard cat)
Pathway
pbg03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
pbg00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
122494440 (SF3B3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pbg03021
]
122494440 (SF3B3)
03041 Spliceosome [BR:
pbg03041
]
122494440 (SF3B3)
03036 Chromosome and associated proteins [BR:
pbg03036
]
122494440 (SF3B3)
Transcription machinery [BR:
pbg03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
SAGA/TFTC/STAGA complex
122494440 (SF3B3)
Spliceosome [BR:
pbg03041
]
Complex A
U2 snRNP components
U2 snRNP specific factors
122494440 (SF3B3)
Complex B
122494440 (SF3B3)
Complex C
U2 SnRNP specific factors
122494440 (SF3B3)
Chromosome and associated proteins [BR:
pbg03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
STAGA complex
122494440 (SF3B3)
TFTC complex
122494440 (SF3B3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-prop_RSE1_1st
Beta-prop_RSE1_2nd
CPSF_A
Beta-prop_BBS7
Motif
Other DBs
NCBI-GeneID:
122494440
NCBI-ProteinID:
XP_043455560
LinkDB
All DBs
Position
E2:complement(49118166..49166094)
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AA seq
1224 aa
AA seq
DB search
MFLYNLTLQRATGISFAIHGNFSGTKQQEIVVSRGKILELLRPDPNTGKVHTLLTVEVFG
VIRSLMAFRLTGGTKDYIVVGSDSGRIVILEYQPSKNMFEKIHQETFGKSGCRRIVPGQF
LAVDPKGRAVMISAIEKQKLVYILNRDAAARLTISSPLEAHKANTLVYHVVGVDVGFENP
MFACLEMDYEEADNDPTGEAAANTQQTLTFYELDLGLNHVVRKYSEPLEEHGNFLITVPG
GSDGPSGVLICSENYITYKNFGDQPDIRCPIPRRRNDLDDPERGMIFVCSATHKTKSMFF
FLAQTEQGDIFKITLETDEDMVTEIRLKYFDTVPVAAAMCVLKTGFLFVASEFGNHYLYQ
IAHLGDDDEEPEFSSAMPLEEGDTFFFQPRPLKNLVLVDELDSLSPILFCQIADLANEDT
PQLYVACGRGPRSSLRVLRHGLEVSEMAVSELPGNPNAVWTVRRHIEDEFDAYIIVSFVN
ATLVLSIGETVEEVTDSGFLGTTPTLSCSLLGDDALVQVYPDGIRHIRADKRVNEWKTPG
KKTIVKCAVNQRQVVIALTGGELVYFEMDPSGQLNEYTERKEMSADVVCMSLANVPPGEQ
RSRFLAVGLVDNTVRIISLDPSDCLQPLSMQALPAQPESLCIVEMGGTEKQDELGERGSI
GFLYLNIGLQNGVLLRTVLDPVTGDLSDTRTRYLGSRPVKLFRVRMQGQEAVLAMSSRSW
LSYSYQSRFHLTPLSYETLEFASGFASEQCPEGIVAISTNTLRILALEKLGAVFNQVAFP
LQYTPRKFVIHPESNNLIIIETDHNAYTEATKAQRKQQMAEEMVEAAGEDERELAAEMAA
AFLNENLPESIFGAPKAGNGQWASVIRVMNPIQGNTLDLVQLEQNEAAFSVAVCRFSNTG
DDWYVLVGVAKDLILNPRSVAGGFVYTYKLVNNGEKLEFLHKTPVEEVPAAIAPFQGRVL
IGVGKLLRVYDLGKKKLLRKCENKHIANYISGIQTIGHRVIVSDVQESFIWVRYKRNENQ
LIIFADDTYPRWVTTASLLDYDTVAGADKFGNICVVRLPPNTNDEVDEDPTGNKALWDRG
LLNGASQKAEVIMNYHVGETVLSLQKTTLIPGGSESLVYTTLSGGIGILVPFTSHEILCF
FHQDHDFFQHVEMHLRSEHPPLCGRDHLSFRSYYFPVKNVIDGDLCEQFNSMEPNKQKNV
SEELDRTPPEVSKKLEDIRTRYAF
NT seq
3675 nt
NT seq
+upstream
nt +downstream
nt
atgtttctatacaacttgaccttgcagcgagccactggcatcagctttgccattcatggc
aacttctctggaaccaaacaacaggaaattgttgtttcccgtgggaagatactggagctg
cttcgtcccgaccccaacactggcaaagtacacactctactaactgtggaagtatttggt
gttatccggtcactcatggcctttaggctgacgggtggcaccaaggactacattgtggtt
ggcagtgactcaggtcggattgttatcctggaataccagccatctaagaatatgtttgag
aaaattcaccaagaaacctttggcaagagtggatgccgccgcattgttcctggccagttc
ttagctgtggatcccaaggggcgagctgttatgattagtgccattgaaaaacagaaattg
gtatatatcttgaacagagatgctgcagcccggcttaccatttcatctcccttggaagcc
cacaaagcgaacactttagtatatcatgttgttggagtagatgtaggatttgaaaatcca
atgtttgcttgtctggaaatggattatgaggaagcagacaatgatcccacaggggaagca
gcagctaatacccagcagacgcttactttctatgagttagaccttggtttaaatcatgtg
gtccggaaatacagtgaacctttggaggaacatggcaactttcttattacagttcccgga
gggtcagatggtccaagtggagtgctgatctgctctgaaaactatatcacctataagaac
tttggtgaccaaccagatatccgctgtccaattcccaggagacggaatgacctggatgac
cctgaaagaggaatgatttttgtctgctctgccacccataagaccaaatcgatgttcttc
tttttggcccaaactgagcaaggagatatcttcaagatcactttggagacagatgaagat
atggttactgagattcggctcaagtattttgatactgtgcctgttgctgctgccatgtgt
gtgcttaaaacaggcttcctttttgtagcatcagaatttggaaatcattacttatatcaa
attgcacatcttggagatgatgatgaagagcctgagttttcatctgccatgcctctggaa
gaaggagacacgttcttcttccagccaagaccacttaaaaaccttgtgctggtcgatgag
ttggacagcctctctcccattttgttttgccagatagctgatctggccaatgaagacaca
ccacagctgtatgtggcctgcggtaggggaccccgatcatctctgagagtcctgcggcac
ggacttgaggtgtcagaaatggctgtctctgagttacccggtaaccccaatgctgtctgg
acagtgcgtcggcacattgaagatgagtttgatgcctatatcattgtgtctttcgtgaat
gccacacttgtattatccatcggagagactgtggaagaagtgactgactctgggttcctg
ggcacaaccccaaccttatcctgctccttgttaggagatgatgccttggtacaggtgtat
cctgatggcattcggcatataagagcagacaagcgagtcaatgagtggaagacccctggg
aagaaaacgattgtgaaatgtgctgtgaaccagcgacaagtggtgattgccctgacagga
ggagagctggtctattttgagatggatccttcaggacagctgaatgagtacacagagcgg
aaggagatgtcagccgatgtggtgtgcatgagtctggccaatgtgcctcctggagagcag
cggtctcgcttccttgctgtggggctggtggacaatactgtcagaatcatctccctggac
ccctcagactgtttgcagcctctgagcatgcaagctctcccagcccagcctgaatccttg
tgtattgtggaaatgggtgggactgagaagcaagatgagctgggtgagaggggctctatt
ggcttcctatacttgaatattgggttacagaatggtgtgctgctgagaactgtcctggac
cccgtcactggggatctgtctgacacccgcactaggtacctggggtctcgtcctgtgaaa
ctctttcgtgtccggatgcaaggccaagaggcagtgttggccatgtctagccgctcgtgg
ttgagctattcttaccagtctcgtttccatctcacccccttgtcttatgagaccctggaa
tttgcgtctggcttcgcctctgaacagtgtcctgagggcattgttgccatctccaccaat
accctgaggattttagcattggagaagctaggtgctgtcttcaatcaggtagcctttcca
ttgcagtatacacccaggaaatttgtcattcacccagagagtaacaaccttatcatcatt
gagacagaccacaatgcctacacagaagctacaaaagctcagagaaagcaacagatggca
gaggaaatggtagaagcagcaggggaggacgagcgggagcttgctgcagagatggcagca
gcgttcctgaatgaaaacctccctgaatccatttttggagctcctaaggctggcaatggg
cagtgggcctctgtgatccgagtcatgaatcctattcaagggaacacactagaccttgtc
cagctagaacagaatgaggctgcttttagtgtggctgtttgtaggttctccaatactggt
gatgattggtatgtgttggtgggcgtggccaaagacctgatactcaatccccggtctgta
gcagggggctttgtctatacctacaagcttgtgaacaatggggaaaaattggagtttttg
cacaagactccagtggaagaggtccctgctgccattgccccattccaggggagggtgttg
attggtgtggggaagcttctgcgagtctatgacttggggaagaagaagttactccgaaag
tgtgagaacaagcatattgccaattacatctctgggatccagactattggacacagggta
attgtgtctgacgtccaggaaagtttcatctgggttcgatacaagcgtaatgagaaccag
ctcatcatttttgctgatgatacttacccacgatgggtcactacggctagccttctggac
tatgacactgtggctggggcagataagtttggcaacatttgtgtggtaaggctcccacct
aacaccaatgatgaagtggatgaggatcccacaggaaacaaagccttgtgggaccggggc
ttgctcaacggggcctctcagaaggcagaggtgatcatgaactaccatgtaggcgagaca
gtgctgtcattacagaagaccacactgatccccggaggctcagaatcgcttgtctatacc
accttgtcaggaggaattggcatccttgtccccttcacatcccatgagattctttgtttc
ttccaccaggaccatgacttcttccagcatgtggaaatgcacctccggtctgagcatccc
cctctctgtgggcgagaccacctcagctttcgttcctattacttccctgttaagaatgtg
atagacggagacctctgtgaacagttcaactccatggagcccaacaaacagaagaatgtc
tctgaagaactggaccgaaccccacctgaggtgtccaagaagcttgaggacatccggacc
cgttatgccttctga
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integrated database retrieval system
