Prionailurus bengalensis (leopard cat): 122494643
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Entry
122494643 CDS
T07574
Symbol
TRIM28
Name
(RefSeq) transcription intermediary factor 1-beta isoform X1
KO
K08882
tripartite motif-containing protein 28 [EC:
2.3.2.27
]
Organism
pbg
Prionailurus bengalensis (leopard cat)
Brite
KEGG Orthology (KO) [BR:
pbg00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
pbg01001
]
122494643 (TRIM28)
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
pbg04121
]
122494643 (TRIM28)
Enzymes [BR:
pbg01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
122494643 (TRIM28)
Protein kinases [BR:
pbg01001
]
Serine/threonine kinases: Other
TIF1 family [OT]
122494643 (TRIM28)
Ubiquitin system [BR:
pbg04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
122494643 (TRIM28)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-B_box
ANCHR-like_BBOX
zf-RING_5
zf-RING_UBOX
PHD
zf-C3HC4
YaaC
Motif
Other DBs
NCBI-GeneID:
122494643
NCBI-ProteinID:
XP_043455908
LinkDB
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Position
E2:complement(277809..284438)
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AA seq
860 aa
AA seq
DB search
MAASAAAASAAAAAAASASPGPGEGSAGGEKRAAASSAAAAASASASSPAGGGGEALELL
EHCGVCRERLRPEREPRLLPCLHSACSACLGPPAPAAANSSGDGGAAGDGAVVDCPVCKQ
QCFSKDIVENYFMRDSGSKAATDSQDANQCCTSCEDNAPATSYCVECSEPLCETCVEAHQ
RVKYTKDHTVRSTGPAKSRDGERTVYCNVHKHEPLVLFCESCDTLTCRDCQLNTHKDHQY
QFLEDAVRNQRKLLASLVKRLGDKHATLQKNTKEVRSSIRQVSDVQKRVQVDVKMAILQI
MKELNKRGRVLVNDAQKVTEGQQERLERQHWTMTKIQKHQEHILRFASWALESDNNTALL
LSKKLIYFQLHRALKMIVDPVEPHGEMKFQWDLNAWTKSAEAFGKIVAERPGTNSTGPTP
MAPPRAPGPLSKQGSGSSQPMEVQEGYGFGSDDPYSSAEPHVSGVKRSRSGEGEVSGLMR
KVPRVSLERLDLDLTADSQPPVFKVFPGSTTEDYNLIVIERGAAAAAAGQPGTAPPGAPG
APPLPGMAIVKEEETEAAIGAPPAATEGPETKPVLMALAEGPGAEGPRLASPSGSTSSGL
EVVAPEGTSAPASGPGALDDSATICRVCQKPGDLVMCNQCEFCFHLDCHLPALQDVPGCE
ACVGSVPGGGLGWLASVQPLILFLSREEWSCSLCHVLPDLKEEDGSLSLDGGDSTGVVAK
LSPANQQKCERVLLALFCHEPCRPLHQLATDSTFSLDQPGGTLDLTLIRARLQEKLSPPY
SSPQEFAQDVGRMFKQFNKLTEDKADVQSIIGLQRFFETRMNEAFGDTKFSAVLVEPPPL
SLPGAGLSAQELSSGPGDGP
NT seq
2583 nt
NT seq
+upstream
nt +downstream
nt
atggcggcctcggcggcggcggcctcggccgcggcggcggcggcggcctcggccagcccg
ggtccgggcgagggttcggcgggcggcgaaaagcgcgccgccgcctcctcggccgcggct
gcggcctcggcctcggcgtcgtcgcccgcggggggcggtggcgaggcgctggagctcctg
gagcattgcggtgtgtgccgggagcgcctgcgccccgagagggagccgcgcctgctgccc
tgcctgcactcggcctgcagtgcctgcctcgggcctccggcgcccgccgccgccaacagc
tcgggggatggcggtgcggcgggcgacggcgccgtggttgactgtcctgtgtgcaagcag
caatgcttctccaaagacattgtggagaattattttatgcgtgacagtggcagcaaggct
gccacagactcccaggatgcaaatcagtgctgcactagctgtgaggataacgcccctgcc
accagctactgtgtggagtgctctgagccgctgtgtgagacgtgtgtggaggcacaccag
cgggtgaagtacaccaaggaccacactgtgcgctccactgggccagccaagtccagggac
ggtgagcgcacagtgtactgcaacgtgcacaagcacgagccccttgtgctgttctgtgag
agctgtgacaccctcacttgtagggactgccagctcaacacccacaaggaccaccaatat
cagtttctggaggatgcagtgaggaaccagcgcaagctcctggcctcactggtaaaacgc
cttggggacaagcatgcgacgctgcagaagaacaccaaggaggttcgcagctcgatccgc
caagtgtctgatgtacagaagcgtgtgcaggtggatgttaagatggccattttgcagatc
atgaaggaactgaacaagcggggccgtgtgctggtcaacgatgcccagaaggtgacagaa
gggcagcaggagcgcctggagcgacaacactggaccatgaccaagatccagaagcaccag
gaacatatcctgcgctttgcctcatgggctctggagagtgacaacaacacagctctgctg
ctctccaagaagctgatctatttccagctgcatcgggccctcaagatgattgtggatcct
gtggagccacatggcgagatgaagttccagtgggacctcaatgcctggaccaagagtgca
gaggctttcggcaagatcgtggcagagcgtccaggcaccaactcaacaggccctacgccc
atggcccctcctcgggctccagggcccttgagcaagcagggttctggcagcagccagccc
atggaggtgcaggaaggctatggctttggctcagacgatccttactcgagtgcagagccc
catgtgtcaggtgtgaagcggtcccgctcaggtgagggcgaggtgagtggcctcatgcgc
aaggtgccacgggtgagccttgagcgcctggacctggatctcacggctgatagccagcca
ccagttttcaaagtcttcccaggcagcaccactgaagattacaatctcattgttattgag
cgtggtgctgcagctgctgctgctggacagcctgggactgctccacctggggctcctggt
gcccctccgctgcctggcatggccattgtcaaggaggaagagacagaggcggccatcgga
gccccacctgctgccaccgaaggccctgagaccaagcctgtgctgatggccctggcggag
ggccccggcgctgagggcccccgcctggcctcacccagtggcagcactagttcaggtcta
gaggtggtggctccagagggcacttcagccccagcaagtggccccggtgccctggatgac
agtgccaccatctgccgcgtctgccagaagccaggcgatctggtcatgtgtaaccagtgc
gagttctgcttccacctggactgccacctgcctgccctgcaggatgtgccagggtgcgag
gcttgtgtagggtctgtgccgggtggagggctgggctggctggcttctgtgcagcccctc
attctctttctatccagggaggagtggagttgctctctctgccatgtgctacctgatctg
aaagaggaagatggcagcctgagtctggatggtggtgatagcactggtgtggtggccaag
ctctcgccagccaaccagcagaagtgtgagcgtgtcctgctggccctgttttgtcacgag
ccctgccgtcccctgcaccagctggctactgactccactttctccctggatcagcctggc
ggcaccctggacttaaccctgatccgcgcccgtctccaggagaagttgtcacctccctat
agctccccccaggagtttgcccaggatgtgggccgcatgtttaagcagttcaacaagctg
acagaggacaaggcagatgtgcagtccatcatcggcctgcaacgcttcttcgagactcgc
atgaacgaggcctttggtgacaccaagttctcagctgtgctggtggagcccccaccgctg
agcctgcctggtgctggcctgagtgcccaggagctatccagtggtcctggtgatggcccc
tga
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