Prionailurus bengalensis (leopard cat): 122497333
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Entry
122497333 CDS
T07574
Symbol
TRIM54
Name
(RefSeq) tripartite motif-containing protein 54
KO
K10653
tripartite motif-containing protein 54
Organism
pbg
Prionailurus bengalensis (leopard cat)
Pathway
pbg04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
pbg00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
122497333 (TRIM54)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
pbg04121
]
122497333 (TRIM54)
Ubiquitin system [BR:
pbg04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
122497333 (TRIM54)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_UBOX
zf-C3HC4_2
zf-C3HC4
RING_XB3-XBAT31
zf-B_box
zf-RING_5
zf-RING_2
zf-C3HC4_4
zf-C3HC4_3
zf-RING_6
DUF349
Sina_RING
UvrD_C
PHP
MIF4G_like_2
Zn_ribbon_FGT1_2
DUF1421
FUSC
zf-RING_11
Motif
Other DBs
NCBI-GeneID:
122497333
NCBI-ProteinID:
XP_043460212
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All DBs
Position
A3:complement(118836217..118858547)
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AA seq
366 aa
AA seq
DB search
MNFTVGFKPLLGDAHSMDNLEKQLICPICLEMFSKPVVILPCQHNLCRKCANDVFQASNP
LWQSRGSTTVSSGGRFRCPSCRHEVVLDRHGVYGLQRNLLVENIIDIYKQESSRPLHSKA
EQHLMCEEHEEEKINIYCLSCEVPTCSLCKVFGAHKDCEVAPLPTIYKRQKSELSDGIAM
LVAGNDRVQAVITQMEEVCQTIEDNSRRQKQLLTQRFEALCAVLEERKAELLQALAREQE
QKLQRVRGLIRQYGDHLEASSKLVESAIQSMEEPQMALYLQQAKELINKVGTMSKVELAG
RPEPGYESMDQFTVSVEHVAEMLRTIDFQAGASGEEEDEEVALEGEEGSAGPEEERPDGP
EGTGGH
NT seq
1101 nt
NT seq
+upstream
nt +downstream
nt
atgaacttcacagtgggtttcaagccgctgctaggggatgcacacagcatggacaacctg
gagaagcagctcatctgccccatctgcctggagatgttctccaaaccagtggtgatcctg
ccctgccagcacaacctgtgccgcaagtgtgccaacgacgtcttccaggcctcgaaccct
ctgtggcaatcccggggctccaccactgtgtcttccggaggccgtttccgttgcccatct
tgcaggcatgaggttgtcctggacagacatggcgtctatggcctgcagcgaaacctacta
gtggagaacattatcgacatttacaaacaagagtcttcccgaccactgcactccaaggct
gagcagcaccttatgtgcgaggagcatgaagaggagaagatcaatatctactgcctgagc
tgtgaagtgcccacctgctctctctgtaaggtcttcggtgcccacaaggactgtgaggtg
gcccccctgcccaccatttacaaacgccagaagagtgagctcagcgatggaatcgcaatg
ctggtggccggcaacgaccgcgtgcaggcagtgatcacacagatggaggaggtgtgccag
accatagaggacaacagccggcggcagaagcagttactaacccagaggttcgaggccctg
tgcgcggtgctggaagagcgcaaggcagagttgctgcaggcgctggcccgcgagcaggag
cagaagctgcagcgcgtgcggggcctcatccgccagtacggagaccacctggaggcttcc
tctaagctcgtggagtcggccatccagtccatggaggagccacagatggcgctctacctc
cagcaggccaaggagctgatcaataaggtcgggacaatgtcgaaagtggagctggcagga
cggccagagccgggctatgaaagcatggatcagttcaccgtgagcgtggagcacgtggcc
gaaatgctgaggaccatcgacttccaggcgggcgcttccggggaggaagaggatgaggag
gtggcgttggagggggaagagggcagcgcggggccagaggaagagcggccggatgggccg
gaaggcaccggcgggcactga
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integrated database retrieval system
