Caldimonas brevitalea: AAW51_0669
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Entry
AAW51_0669 CDS
T04216
Symbol
hupB
Name
(GenBank) DNA-binding protein
KO
K03530
DNA-binding protein HU-beta
Organism
pbh
Caldimonas brevitalea
Brite
KEGG Orthology (KO) [BR:
pbh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pbh03032
]
AAW51_0669 (hupB)
03036 Chromosome and associated proteins [BR:
pbh03036
]
AAW51_0669 (hupB)
03400 DNA repair and recombination proteins [BR:
pbh03400
]
AAW51_0669 (hupB)
DNA replication proteins [BR:
pbh03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
AAW51_0669 (hupB)
Chromosome and associated proteins [BR:
pbh03036
]
Prokaryotic type
Nucleoid associated proteins
HU (heat unstable protein)
AAW51_0669 (hupB)
DNA repair and recombination proteins [BR:
pbh03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Supressor
AAW51_0669 (hupB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
HU-CCDC81_euk_1
HU-CCDC81_bac_2
Motif
Other DBs
NCBI-ProteinID:
AKJ27360
UniProt:
A0A0G3BLF5
LinkDB
All DBs
Position
complement(764809..765258)
Genome browser
AA seq
149 aa
AA seq
DB search
MNRVELIDKLAAEHELSKAAAGRVLDTFVQTIVNAVKKGDSVQLVGFGTFKQVARAARTG
FNPKEGKSIKIAATKVPKFVPGSAFKAAIDPKAAARKAAKAGAAPAAGKKAAAKPAGKSA
VKTAAKTAAKPTAKPVAKKAAAKKAARKA
NT seq
450 nt
NT seq
+upstream
nt +downstream
nt
atgaaccgagttgaactgatcgacaagctggccgccgaacacgaactgtccaaggccgct
gctggccgcgtgctcgacaccttcgtccaaaccatcgtcaatgccgtcaagaagggcgac
agcgtgcagctcgtcggcttcggcaccttcaagcaggtggcccgcgccgcgcgcaccggc
ttcaacccgaaggaaggcaagtcgatcaagatcgcggccaccaaggtgccgaagttcgtg
ccgggcagcgccttcaaggccgccatcgacccgaaggccgctgctcgcaaggccgccaag
gccggcgccgcgccggctgctggcaagaaggccgccgcgaagcccgctggcaagtcggct
gtcaagacggctgccaagacggcagcgaagcccaccgccaagccggtcgccaagaaggct
gccgcgaagaaggccgcacgcaaggcctga
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integrated database retrieval system
