Caldimonas brevitalea: AAW51_0947
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Entry
AAW51_0947 CDS
T04216
Symbol
dapF
Name
(GenBank) diaminopimelate epimerase
KO
K01778
diaminopimelate epimerase [EC:
5.1.1.7
]
Organism
pbh
Caldimonas brevitalea
Pathway
pbh00300
Lysine biosynthesis
pbh00470
D-Amino acid metabolism
pbh01100
Metabolic pathways
pbh01110
Biosynthesis of secondary metabolites
pbh01120
Microbial metabolism in diverse environments
pbh01230
Biosynthesis of amino acids
Module
pbh_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
pbh00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
AAW51_0947 (dapF)
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
AAW51_0947 (dapF)
Enzymes [BR:
pbh01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.1 Acting on amino acids and derivatives
5.1.1.7 diaminopimelate epimerase
AAW51_0947 (dapF)
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Gene cluster
GFIT
Motif
Pfam:
DAP_epimerase
PhzC-PhzF
Motif
Other DBs
NCBI-ProteinID:
AKJ27638
UniProt:
A0A0G3BI26
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All DBs
Position
1065880..1066731
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AA seq
283 aa
AA seq
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MKLRFTKMQGAGNDFVVLDATRQPLTLTPEQYRRLADRRFGVGADQILIVGPAPAPDVDF
SYRIVNADGGEVEQCGNGARCFAKFVRDQGLSEKSAIRVSTHSGVIEPRLQPDGRVTVNM
GAPVFEPARIPFDAAGLAAQPQGDHAQWPVEVAGQTVPLAVASMGNPHAVLRVDDVDRAP
VHELGPKLESHTRFPRRVNVGFLQVVSRSQVRLRVYERGAGETLACGTGACAAVVLGIRL
GWLDPWVEVETRGGRLGIEWQGAGHPVWMTGPAVTVFEGEIEI
NT seq
852 nt
NT seq
+upstream
nt +downstream
nt
atgaagctgcgctttaccaagatgcagggggccggcaacgacttcgtcgtgctcgatgcc
acccgccagcccctgaccctgacgcccgagcaataccggcgcctcgccgaccgccgtttc
ggcgtcggcgccgaccagatcttgatcgtcggaccggcgccggcgcccgacgtcgatttc
agctaccgcatcgtcaacgccgacggcggtgaagtcgagcaatgcggcaacggcgcacgc
tgcttcgcgaaattcgtgcgcgaccaggggctgagcgagaaaagcgcgatccgcgtcagc
acccacagcggtgtcatcgagccccgcttgcagcccgacggccgggtcaccgtgaacatg
ggggcgccagtgttcgagccggcgcgcatcccgttcgacgctgccggcctggcggcgcag
ccgcagggcgaccacgcacagtggccggtcgaggtggcgggccagaccgtgccactggcc
gtggcgtcgatgggcaacccgcatgcggtgctgcgggtcgacgatgtcgaccgtgcgccg
gtgcacgaactggggccgaagctcgagtcgcatacgcgctttccgcgccgcgtgaatgtc
ggcttcctgcaggtcgtttcgcgctcgcaggtccgcttgcgcgtctatgagcgcggtgcc
ggcgagacgctcgcctgcggcactggcgcctgcgctgcggtggtgctgggcatccggctc
ggctggctcgacccgtgggtcgaggtcgaaacccgcggcggccggctcggcatcgagtgg
caaggtgcgggtcacccggtctggatgaccgggcccgccgtcaccgtcttcgaaggcgaa
atcgagatctag
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