Caldimonas brevitalea: AAW51_1066
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Entry
AAW51_1066 CDS
T04216
Symbol
rnb
Name
(GenBank) ribonuclease II
KO
K01147
exoribonuclease II [EC:
3.1.13.1
]
Organism
pbh
Caldimonas brevitalea
Brite
KEGG Orthology (KO) [BR:
pbh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
pbh03016
]
AAW51_1066 (rnb)
Enzymes [BR:
pbh01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.1 exoribonuclease II
AAW51_1066 (rnb)
Transfer RNA biogenesis [BR:
pbh03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
AAW51_1066 (rnb)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNB
Myosin_N
Motif
Other DBs
NCBI-ProteinID:
AKJ27757
UniProt:
A0A0G3BEK2
LinkDB
All DBs
Position
complement(1199133..1201193)
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AA seq
686 aa
AA seq
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MFALFEEAGKFLAGRVMSETDSSVQIELDSGKRVKVKTANVLLKFEQPQPAQLLAQAQPL
AAEIDLDLAWEFAPAEEFGFADIARDYFDAKAGVVHQVATLVRLFEAPHYFRRVGKGRFK
KAPEEIVKAALLGIERKKQQQAQIEAWAGELVDGQCPPPIREQLYRILFKPDKNALEYKA
VVEAAKQSQTAPLDLLTKAGAIDSPYQFHWRRFLFEHFPKGYAFPAFSAPPVKDELPLAT
VSAFSIDDSATTEIDDALSVQGLGSGTIVFGIHIAAPGLAITPGTPLDQLARSRYSTVYM
PGYKITMLPDEVVQAYTLQEGRECPAVSLYVTMDEATLEIKASETRLERVPIAANLRHDK
LDGIVTEAALAGEADAAFPFADELRFAYRLAKHLKAQREVVRGKPEVFTRPDYSFKLVGN
DDQEPSGHETVLIGVRKRGEPLDLIVAEAMILANSTWGGWIAEMGVPGIYRGQASLLPGV
KVRMSTKPMPHAGMGVKQYTWATSPLRRYVDLVNQWQIIACARHGRTAALVAPFKPKDAE
LFSVISGFDAAYTAYNDFQSGIERYWTLRYLEQNSVTELTAAVLKEGLVRAETLPLVFRA
VGAEKLARGARVKVRIASVDELTLDVYASVIERLDDTSAAAAPAAEDETEELEPAAGPLA
LAIDVNDGDAQQGDNTAGDNTPPSAA
NT seq
2061 nt
NT seq
+upstream
nt +downstream
nt
atgttcgccctcttcgaagaagccggaaaatttctcgccggccgcgtgatgtccgagacc
gacagttcggtgcagatcgagctggattccggcaagcgcgtcaaagtcaaaaccgccaac
gtgctgctgaaattcgagcagccgcagccggcccagctgctggcgcaggcccaaccgttg
gccgccgagatcgacctcgacctggcgtgggagttcgcgccggccgaggaattcggcttc
gccgacatcgcccgcgactatttcgacgccaaggccggcgtggtgcaccaggtcgccacc
ttggtgcggctgttcgaggcaccgcactatttccggcgcgtcggcaagggccgcttcaag
aaggcgcccgaagagatcgtcaaggccgccttgctgggcatcgagcgcaaaaagcagcag
caggcccagatcgaagcctgggccggtgaactggtggacggccagtgcccgccgccgatc
cgcgagcagctctaccgcatcctgttcaagcccgacaagaacgcgctcgagtacaaggcg
gtggtcgaagccgccaagcagtcgcagaccgcgccgctggatctgttgaccaaggccggc
gcgatcgacagcccctaccagttccactggcggcgctttttgttcgagcacttccccaag
ggttacgccttcccggcgttcagcgccccgccggtcaaggacgagctgccgctcgccacg
gtgtcggccttcagcatcgacgactcggcgacgaccgaaatcgacgacgcgctgtcggta
caaggcttgggctcgggcaccatcgtgttcggcatccacattgccgcacctggcctcgcc
atcacgcccggcacgccgctcgaccagctggcccgctcgcgctactccaccgtctacatg
cccggctacaagatcaccatgttgccggacgaggtggtgcaggcctacacgctgcaagaa
ggccgcgaatgcccggcggtttcgctctacgtgacgatggacgaggccacgctcgagatc
aaggcgagcgagacgcggctcgagcgggtgccgatcgctgccaacctgcggcacgacaag
ctcgacggcatcgtcaccgaagcggcgctggccggcgaggccgacgcggccttcccgttc
gcagacgagctgcggtttgcctaccgcctggccaagcatctgaaggcgcagcgcgaagtg
gtgcgcggcaagcccgaggtgttcacccggcccgactacagcttcaagctggtcggcaac
gacgaccaggagccgagcggccacgagaccgtgctgatcggcgtgcgcaagcgcggcgag
ccgctcgacctgatcgtcgccgaggcgatgatcctcgccaacagcacctggggcggctgg
atcgcggagatgggcgtgccgggcatctaccgcggccaggccagtttgctgccgggggtc
aaggtgcgcatgagcaccaagccgatgccgcatgccggcatgggcgtgaagcaatacacc
tgggccacctcgccgttgcggcgttatgtcgacctggtcaaccagtggcagatcatcgct
tgcgcacgccatggccgtacggccgcgttggtggcgcccttcaagcccaaggacgccgag
ctgttctctgtgatctcgggcttcgatgctgcctatacggcctacaacgacttccagtcg
ggcatcgagcgctactggaccttgcgctacctggagcagaacagcgtcaccgaactcacc
gccgcggtgctcaaggaggggctggtgcgcgccgagacgctgccgctggtgttccgtgct
gtgggcgccgaaaagctggcacgcggtgcccgtgtcaaggtgcgcatcgcctcggtcgac
gagctgacgctggacgtctacgccagcgtcatcgaacgcctcgacgacaccagcgccgcc
gcggcgccggcggccgaggatgaaaccgaagagctggaacccgccgccggcccgctggcg
ctggccatcgacgtgaacgacggcgacgcgcaacaaggcgacaataccgccggcgacaac
acccccccctcggctgcctga
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