Caldimonas brevitalea: AAW51_1080
Help
Entry
AAW51_1080 CDS
T04216
Symbol
phrB
Name
(GenBank) deoxyribodipyrimidine photolyase
KO
K01669
deoxyribodipyrimidine photo-lyase [EC:
4.1.99.3
]
Organism
pbh
Caldimonas brevitalea
Brite
KEGG Orthology (KO) [BR:
pbh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pbh03400
]
AAW51_1080 (phrB)
Enzymes [BR:
pbh01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.3 deoxyribodipyrimidine photo-lyase
AAW51_1080 (phrB)
DNA repair and recombination proteins [BR:
pbh03400
]
Eukaryotic type
SSBR (single strand breaks repair)
Direct repair
AAW51_1080 (phrB)
Prokaryotic type
AAW51_1080 (phrB)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
FAD_binding_7
DNA_photolyase
Motif
Other DBs
NCBI-ProteinID:
AKJ27771
UniProt:
A0A0G3BK85
LinkDB
All DBs
Position
complement(1222139..1223647)
Genome browser
AA seq
502 aa
AA seq
DB search
MQRFYSSEKIGPMEKVLDSALVWFRRDLRLHDHAALYHALKAARRVWCVFVFDTEILDPL
PRADRRVEFIRDALVELDATLRATTAQPGGGLIVLHGRAVDVLPALADTLHVQAVYANHD
YEPAAKARDAQVLGRLADLGIMLHTSKDQVVFEADEVLTAAGGSYSVFTPYKTAWLRKLD
GYYLRAYPTERYADALAPRPPELQRPVPMLAELGFAPTNLHELQMPPGAQGAEALLDDFL
DRIDRYEDSRNFPALKGPSYLSVHLRFGTASVRHLARLAWDRARAGSRGAEVWLSELVWR
DFYHQVLHHHPRVVTHSFKPEYDAIRWEHGKHADKLFAAWCEGRTGYPLVDAAMAQLNQT
GYMHNRLRMVTASFLCKDLGVDWRRGERYFALQLNDYDLAANNGGWQWAASTGCDAQPYF
RIFNPVSQSQKFDAEGKFIRRYLPQLAKLPDAAIHAPWLARPVELAAAGVTLGQDYPEPI
VSHEDARQRTLQRYAGVKSVSK
NT seq
1509 nt
NT seq
+upstream
nt +downstream
nt
atgcagcgattctattcctctgagaagatcggcccgatggagaaagtccttgactcggcc
ttggtgtggttccgacgggacctgcggctgcacgatcacgcggccctttaccatgccttg
aaggccgcacgccgcgtctggtgcgtgtttgtcttcgacaccgagatcctcgacccgctg
ccgcgcgccgaccggcgtgtcgagttcatccgagatgccttggtcgagctcgatgcgacg
ctgcgcgccaccaccgcgcaaccgggcggcggcctgatcgtgctgcacggccgcgcggtc
gacgtgctgcccgcgctggccgacaccttgcacgtgcaggcggtctatgccaaccacgac
tacgagcccgccgccaaggcgcgcgacgcgcaggtgttgggacgcctggccgacctcggc
atcatgctgcacacgtccaaggatcaggtggtgttcgaggctgacgaggtgctgaccgcg
gcgggcggcagctacagcgtcttcacaccctacaagaccgcctggctgcgcaagctcgac
ggctactacctgcgggcctacccgaccgaacgctatgccgacgcactcgcgccgcgtccg
cccgagttgcaacggccggtgcccatgctcgccgagctgggctttgcgcccaccaacctg
catgaactgcaaatgcccccaggcgcgcagggcgccgaggccttgctggacgacttcctc
gaccgcatcgatcgctacgaggacagccgcaacttcccggcgctgaaaggccccagttac
ctttcggtgcatctgcgcttcggcacggcgtcggtgcgtcacctggcccggctggcttgg
gaccgtgcgcgcgccggctcgcggggagccgaggtgtggctgtcggagctggtctggcgc
gacttctatcaccaggtgctgcaccatcacccgcgggtcgtgacgcacagcttcaagccg
gagtacgacgccatccgctgggagcacggcaaacacgccgacaagctgttcgcggcctgg
tgtgagggacgcaccggctatccgctggtggacgccgcgatggcgcagttgaaccagacg
ggctacatgcacaaccggctgcgcatggtgaccgccagcttcctctgcaaggacctcggc
gtggactggcggcgcggcgagcgctatttcgcgctgcaactgaacgactacgacctggcg
gccaacaacggcgggtggcagtgggccgcgtccacgggctgcgatgcgcagccctatttc
cgcatcttcaacccggtcagccagagccagaagttcgatgccgagggcaagttcatccgc
cgctacctgccgcaactcgccaagctgcccgatgcggccatccatgccccgtggctggcg
cggccggtcgagctcgccgcggcgggcgtgaccttagggcaggactatccggagcccatc
gtttcgcacgaagacgcgcggcagcgcacgctgcagcggtatgccggggtgaagtcggtc
agcaagtga
DBGET
integrated database retrieval system
