Caldimonas brevitalea: AAW51_1108
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Entry
AAW51_1108 CDS
T04216
Name
(GenBank) RNA polymerase factor sigma-32
KO
K03089
RNA polymerase sigma-32 factor
Organism
pbh
Caldimonas brevitalea
Brite
KEGG Orthology (KO) [BR:
pbh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pbh03021
]
AAW51_1108
Transcription machinery [BR:
pbh03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
AAW51_1108
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4
Sigma70_r1_2
IF2_N
HTH_3
Sec66
HTH_psq
DUF2390
Motif
Other DBs
NCBI-ProteinID:
AKJ27799
UniProt:
A0A0G3BEI0
LinkDB
All DBs
Position
complement(1245354..1246292)
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AA seq
312 aa
AA seq
DB search
MASMNASTAHNALAIRDPWALVPSLGNLDAYISAVNRLPMLTAEEEQTYARRFREHNDLQ
AAGKLVLSHLRLVVSVSRQYLGYGLPHGDLIQEGNVGLMKAVKRFDPGQGVRLVSYALHW
IKAEIHEYILKNWRMVKVATTKAQRKLFFNLRSMKQNLKDGAADAEVHRSTLTDREVDAV
ARELNVKREEVMEMETRLSGGDVALEPSVDDGEESYAPIAYLADESSEPTRVMETQRRDV
LATDGITSALNALDDRSRRIVEERWLKVNDDGSGGMTLHELASEYGVSAERIRQIEVAAM
KKMRKSLGEYAS
NT seq
939 nt
NT seq
+upstream
nt +downstream
nt
atggcttctatgaacgcctcgactgcacacaacgcactcgccatccgcgacccgtgggcc
ctggtgccctcactgggcaacctggatgcctacatctccgcggtcaaccggctgccgatg
ctgacggccgaagaagagcagacctacgcgcgccgcttccgggagcacaacgacctgcaa
gcggccggaaagctggtgctgtcgcacctgcgcctggtggtgtcggtgtcgcgccagtat
ctcggctacggcctgccgcacggcgacctgatccaggaaggcaacgtgggcctgatgaag
gccgtcaagcgtttcgacccgggccagggcgtgcgcctcgtcagctacgcgctgcactgg
atcaaggccgagatccacgaatacatcctgaagaactggcgcatggtcaaggtcgcgacg
accaaggcgcagcgcaagctgttcttcaacctgcgctcgatgaagcaaaacctcaaagac
ggcgccgccgacgctgaggtgcaccgcagcaccttgaccgaccgcgaagtcgacgccgtg
gcgcgcgagctgaacgtcaagcgcgaagaggtgatggagatggaaacgcggctgtccggc
ggcgacgtggcgctggagccgagcgtcgacgacggtgaggaaagctacgcgccgatcgcc
tacctggccgacgaatcgagcgagccgacccgggtgatggagacgcagcgccgcgacgtg
ctcgcgaccgacggcatcaccagcgccttgaacgcgctggacgatcgcagccgccgcatc
gtcgaggagcgctggctgaaggtcaacgacgacggctcgggcggcatgacgctgcacgag
ctggcatcggaatacggcgtcagcgccgagcgcatccgccagatcgaagtggcggcgatg
aagaagatgcgcaagtcgctgggcgagtacgcgtcctga
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