Caldimonas brevitalea: AAW51_1732
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Entry
AAW51_1732 CDS
T04216
Symbol
pnp
Name
(GenBank) polynucleotide phosphorylase/polyadenylase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
pbh
Caldimonas brevitalea
Pathway
pbh03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pbh00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
AAW51_1732 (pnp)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pbh03019
]
AAW51_1732 (pnp)
03016 Transfer RNA biogenesis [BR:
pbh03016
]
AAW51_1732 (pnp)
Enzymes [BR:
pbh01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
AAW51_1732 (pnp)
Messenger RNA biogenesis [BR:
pbh03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
AAW51_1732 (pnp)
Transfer RNA biogenesis [BR:
pbh03016
]
Prokaryotic type
tRNA degradation factors
AAW51_1732 (pnp)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
PNPase
S1
KH_1
OB_RRP5_4th
KH_2
S1_RRP5
DUF5813
KH-I_KHDC4-BBP
CsrA
KH_KhpA-B
Motif
Other DBs
NCBI-ProteinID:
AKJ28423
UniProt:
A0A0G3BKA3
LinkDB
All DBs
Position
1966655..1968790
Genome browser
AA seq
711 aa
AA seq
DB search
MSMFNKVTKTFQWGGRTVRLETGEIARQATGAVLVDIEDTVVLATVVAAKTAKPGQDFFP
LTVDYIEKTYAAGKIPGSFFKREGRPSELETLTSRLIDRPIRPLFPEGFFNEVQVVIHVM
SLNPEVDADIAAMIATSAALSISGIPFNGPISAARVGYINGEYVLNPGKTQQTQSRLDLV
VAGTEAAVLMVESEADQLSEDVMLGAVVFGHEQGKIAINAIHELVREAGKPEWDWQPPAK
DESFIAKVTQLAEEKLRAAYQIRSKQARTQATREAYAAVKQALTQDGGEFDETKLDGLLF
DIEARIVRSQILAGEPRIDGRDTRTVRPIEIRTGVLPRTHGSALFTRGETQAVVVATLGT
ERDAQIIDALSGEYSDRFMMHYNMPPFATGETGRVGSPKRREIGHGRLAKRALIPVLPAK
DEFAYAIRVVSEITESNGSSSMASVCGGCLALMDAGVPLKAHVAGVAMGLIKEGNRFAVL
TDILGDEDHLGDMDFKVAGTSSGITALQMDIKIQGITKEIMQVALAQAKEGRLHILGKMV
DAVGGAKTEVSQFAPRLYTMKINPEKIRDVIGKGGATIRALTEETGTQIDIAEDGTITIA
STDTAMADLAKKKIEEITAEVEVGKIYEGPVTKILEGIGALVNLLPGKDGLVHISQIANE
RVNKVTDYLEVGQTVRVKVLETDEKGRVKLSIKALLDRGYAPDQQQQQQQQ
NT seq
2136 nt
NT seq
+upstream
nt +downstream
nt
atgagcatgttcaataaagtcaccaagaccttccaatggggcggccgcacagtccgcctg
gaaaccggcgaaatcgcccgtcaagccaccggcgccgtgctggtcgacatcgaggacacc
gtggttctggcgaccgtggtggcggccaagaccgccaagcccggccaggacttcttcccg
ctgacggtcgactacatcgagaagacctatgccgccggcaagatcccgggcagcttcttc
aagcgtgaaggccgcccgagcgaactcgaaaccctgacctcgcgcctgatcgaccgcccg
attcgcccgctgttccccgagggtttcttcaatgaagttcaggtggtcatccacgtgatg
tcgctgaaccccgaggtggacgccgacatcgccgcgatgatcgcgaccagtgccgcgctg
tcgatctccggcatcccgttcaacggtccgatcagcgctgcgcgtgtgggctacatcaac
ggcgaatacgtgctgaacccgggcaagacccagcagacccaatcgcgcctcgacctggtg
gtggctggcaccgaagcggccgtgctgatggtggagtcggaagccgaccagctgtctgaa
gacgtgatgctgggcgccgtggtgttcggccacgagcagggcaagatcgcgatcaatgcg
atccacgaactggtgcgcgaagccggcaagcccgaatgggactggcagccgcccgccaag
gacgagtccttcatcgccaaggtgacgcagctggccgaagagaagctgcgcgccgcctac
cagatccgctccaagcaagcccgcacgcaagccacccgcgaagcttatgccgcggtcaaa
caggcgctgacgcaagacggcggcgagttcgacgaaaccaagctcgacggcctgctgttc
gacatcgaagcgcgcatcgtgcgcagccagatcctggccggcgagccccgcatcgacggc
cgtgacacccgcaccgtgcgcccgatcgagatccgcaccggtgtgctgccgcgcacccac
ggctcagcgctgttcacccggggtgaaacccaggccgtggtggtcgcgaccctcggcacc
gagcgcgacgcccagatcatcgatgcgctgagcggcgagtactccgaccgcttcatgatg
cactacaacatgcccccgttcgcgaccggcgagaccggccgcgtgggcagccccaagcgg
cgcgagatcggccacggccgcctggccaagcgggccctgatcccggtgctgccggccaag
gacgagttcgcctatgcgatccgcgtcgtgtccgagatcaccgagtcgaacggttcgtcg
tcgatggcctccgtgtgcggcggctgtctggcgctgatggacgccggcgtgccgttgaag
gcgcacgtggccggtgtcgcgatgggcctgatcaaggaaggcaaccgcttcgcggtgctg
accgacatcctcggcgatgaggatcacctgggcgacatggacttcaaggtggccggcacg
tcgagtggcatcactgcgctgcagatggacatcaagatccagggcatcaccaaggaaatc
atgcaggtcgcgctggcgcaggccaaggaaggccgcctgcacatcctcggcaagatggtc
gacgccgtcggcggcgccaagaccgaggtgtcgcagttcgcgccccgcctgtacacgatg
aagatcaacccggagaagatccgcgacgtgatcggcaagggcggcgccaccattcgcgcg
ctgaccgaagagaccggcacgcagatcgacatcgccgaagacggcaccatcaccatcgca
tcgaccgacaccgcgatggccgacctggcgaagaagaagatcgaagagatcaccgccgaa
gtcgaggtgggcaagatctacgaaggcccggtcaccaagatcctcgagggcatcggcgcg
ctggtcaacctgctgcccggcaaggacggcctggtgcacatcagccagatcgccaacgag
cgcgtcaacaaggtcaccgactacctcgaagtcggccagaccgtgcgcgtgaaggtgctc
gagaccgacgagaagggccgtgtgaagctgtcgatcaaggcgctgctggaccgcggctac
gcgcccgaccaacagcagcaacagcagcagcagtaa
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