Caldimonas brevitalea: AAW51_2234
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Entry
AAW51_2234 CDS
T04216
Symbol
rho
Name
(GenBank) transcription termination factor Rho
KO
K03628
transcription termination factor Rho
Organism
pbh
Caldimonas brevitalea
Pathway
pbh03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pbh00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
AAW51_2234 (rho)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pbh03021
]
AAW51_2234 (rho)
03019 Messenger RNA biogenesis [BR:
pbh03019
]
AAW51_2234 (rho)
Transcription machinery [BR:
pbh03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
Transcription termination factor
AAW51_2234 (rho)
Messenger RNA biogenesis [BR:
pbh03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
AAW51_2234 (rho)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rho_RNA_bind
ATP-synt_ab
Rho_N
NACHT
AAA_25
OB_RNB
S1CSD-TOTE-2
AAA
AAA_22
Motif
Other DBs
NCBI-ProteinID:
AKJ28925
UniProt:
A0A0G3BQU5
LinkDB
All DBs
Position
complement(2496607..2497869)
Genome browser
AA seq
420 aa
AA seq
DB search
MQLSELKVLHVSELIKMAESLEIENTSRMRKQELMFAIMKRRAKQGEQIFGDGVLEVLPD
GFGFLRSPETSYLASTDDIYLSPSQIRRFNLHTGDAIEGEVRVPKDGERYFALVKVDRVN
GLTPEENKHKIMFENLTPLFPKEQFKLEREIKSEENITGRIVDLIAPIGKGQRALLVAPP
KSGKTVMMQHLAHAIIANHPDVYLIVLLVDERPEEVTEMQRTVRGEVISSTFDEPAARHV
QVAEMVIERAKRLVELKKDVVILLDSITRLARAYNNVLPSSGKVLTGGVDANALQRPKRF
FGAARNIEEGGSLTIIGTALVDTGSRMDEVIYEEFKGTGNCEIHMDRRMAEKRVYPSILL
NKSGTRREELLLKPEILQKTWILRKLLYPMDEIEAMEFILDKMKSTKTNLDFFDMMRRGG
NT seq
1263 nt
NT seq
+upstream
nt +downstream
nt
atgcaactatccgaactcaaagtccttcacgtctcggaactcatcaagatggccgagtcg
ctggagatcgagaacaccagccgcatgcgcaagcaggagctgatgttcgcgatcatgaag
cggcgcgccaagcagggcgagcagatcttcggcgacggcgtgctcgaggtcttgccggac
ggttttggcttcctgcgctctcccgagacgagctatctggccagcaccgacgacatttat
ctgtcgcccagccagatccggcgcttcaacctccacaccggtgacgccatcgaaggcgaa
gtccgcgtgcccaaggacggcgagcgctattttgcgctggtgaaggtcgaccgcgtgaac
ggtctgacgcccgaggagaacaagcacaagatcatgttcgagaacttgacgccgctgttc
ccgaaggagcagttcaagctcgaacgcgagatcaagtccgaagagaacatcaccggccgt
atcgtcgacctgatcgcaccgatcggcaaaggccagcgggctttgctggtggcgccgccc
aagagcggcaagaccgtgatgatgcagcacctcgcgcacgccatcatcgccaaccacccc
gatgtctacctgatcgtgctgctcgtcgacgagcggcccgaggaagtgaccgaaatgcag
cgcaccgtgcgcggcgaggtcatcagctcgaccttcgacgagccggcggcgcgccacgtg
caagtcgccgagatggtgatcgagcgtgccaagcgcctggtcgagttgaagaaggacgtg
gtgatcctgctcgattcgatcacccgtctggcgcgtgcgtacaacaacgtgctgccctcg
tcgggcaaggtgttgaccggcggtgtcgacgccaacgcgctgcagcggcccaaacgcttc
ttcggcgcggcccgcaacatcgaggaaggcggctcgctgaccatcatcggcaccgcgctg
gtcgacaccggcagccgcatggacgaggtgatctacgaagagttcaagggcaccggcaac
tgcgagatccacatggaccgtcgcatggccgagaagcgcgtctacccgtccatcctgctg
aacaagtcgggcacgcgtcgcgaagagctgctgctcaagcccgagatcctgcaaaagacc
tggatcctgcgcaagctgctctacccgatggacgagatcgaggcgatggagttcatcctc
gacaagatgaagtcgacgaagaccaatctggacttcttcgacatgatgcgccgcggcggc
tga
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