Caldimonas brevitalea: AAW51_2687
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Entry
AAW51_2687 CDS
T04216
Name
(GenBank) DNA double-strand break repair Rad50 ATPase
Organism
pbh
Caldimonas brevitalea
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_27
AAA_23
SMC_N
AAA_15
AAA_29
Motif
Other DBs
NCBI-ProteinID:
AKJ29378
UniProt:
A0A0G3BN17
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Position
3024243..3027845
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AA seq
1200 aa
AA seq
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MKLLQLHLVAFGPFTGRVLDFERSGPDAGCAPLLHLVCGPNEAGKSSMLRALCDLRFGIP
HNSADNYRPEVTMQVGAVLLDGDGRPVALMRRKGRGQTLSYFDPATGAVDTSRSPAPQHE
AALTAALTRPDFEAMFGLDHARLRWGGEQLLKGEGEVGAALFEASAGAKSIPAILSALDT
RAREFFMPGSRARRGRLNEALSRLAEQRQLYKDALVRPKEWSDLNRRHEEAAAALRRLDE
AVLEADRRLQLYTELRAVAPQLDEHDRAVDELQQLADAPLLPPSAAEDRARAQAQLDAAL
AGMADARRDIERLGAEVLSVDIDTVALAAAGAIERLAVAVQSAEPRRQQRVDAVSARRGL
AAEAAALTATFDAGGAPMAAPDPTQVAVVEDTLRTLERAQQQHDAAAAQLEALAAPEHDP
LDPLPPDTARAALQAALDGSRSLEQSGPALDTLQADTSTCERQLRQLLHRLQLADVEGLR
QVRPLLPAELEVADMAAREAQVELRRIDTEDATLRADLQRVQGGLDRLAAQGELVTRLRV
DEARARRDSAWALVRRAHVDRGLSPEAAAAEFARLHAGPGDVSVVAGFESALRLADHLSD
LFSADTERATQIQLDSQRVRDMQAARVALAEQRRQAAQAADAAAAAWRARLAAAGLPDTS
PAALREWQAELGDALRLADELDTLREQQRAQQARWAAAIDLLQRALDPLPGLGGHAPAPP
TGEVPLAARLHTLQAAAARVKADLDQRALRIEGVKGQRVERERQRQLAAQRLAAAQGAVT
QAQHALVPHLGWLQLTPAASASVVRARLRQLLRWRELQQALAAADAVIDGHDSALQLLEL
QASEVAALLGEAWVRGAASAPEQGGTAARLLVDRLQARLEGARHAAERRRALERGLAAAQ
AALAQHEQQAAAQQALLAQWVAAAGVDSAAQLPDAEARSQRRRDAARMAEEAQRKLRQAS
SRSVEELRRLLQGHDAAALEQQLRAAADARQALDEPVRQARQAEEAARRALAEIDTSDRA
AQAREQMEQAMATVRSGLAPWARLRLAHALLDESLRRFRERAQGPMLSAASGYFARMTGG
RYARLSSDDSGERPVLLAHRDDGARITVAQMSEGTRDQLYLALRLAALELHQASGQGMPL
VLDDVLMTSDDVRAGRMLQALAAYARGGAGRQVLIFTHHPHLLDLACSSVDDGLLATHEL
NT seq
3603 nt
NT seq
+upstream
nt +downstream
nt
atgaagctgctgcaactgcacctggtggcgttcggccctttcaccggccgcgtgctcgac
ttcgaacgcagcggccccgacgcgggctgcgcgccgctgctgcacctggtgtgcgggccg
aacgaggcgggcaagtcgtcgatgctgcgcgccttgtgcgatctgcgcttcggcatcccg
cacaacagcgccgacaactaccgccccgaggtgaccatgcaggtgggtgcggtcttgctc
gacggcgacggccggcccgtcgcgctgatgcggcgcaaggggcgggggcagaccttgagc
tacttcgacccggcgaccggtgccgtcgacacctcgcggtcgccggcaccccagcacgaa
gcggccctcaccgccgccctcacgcggcccgactttgaagccatgttcggcctcgaccat
gcgcggctgcgctggggcggcgagcagctgttgaagggtgaaggtgaggtgggggcggcg
ctgttcgaggcgagcgcgggcgccaagagcatcccggccatcctgtcggcgctcgacacg
cgggcgcgcgagtttttcatgccgggcagccgggcccggcgcgggcgcctcaacgaagcc
ttgagccgcctcgcggagcagcggcagctctacaaggacgccttggtgcgcccgaaggaa
tggagcgacctgaaccggcgccatgaagaagcggctgccgccctgcggcgcctcgacgag
gccgtgctcgaggccgaccgccggctgcagctttacaccgagctgcgggcggtggcgccg
cagctggacgagcacgaccgggcggtcgacgagctgcagcagctggccgatgcgcccttg
ctgccgccgtcggccgccgaagaccgggcccgtgcgcaggctcaactcgacgcggcgctg
gcgggcatggccgacgcccgccgcgacatcgaacggctcggcgccgaagtgctgagcgtc
gacatcgacacggtggccctggcggccgcgggtgccatcgagcgcctggccgtcgcggtg
caaagcgccgagccgcgccggcagcagcgcgtcgacgccgtgtcggctcgccggggcctc
gcggcggaggccgccgcgctgaccgccaccttcgatgccggcggcgcgccgatggcggcg
ccggacccgacgcaagtggccgtcgtggaagacacgctccgcacgttggagcgcgcacag
cagcaacacgacgccgcggccgcacagctcgaggcgctggcggcgcccgagcacgacccc
ctcgatcccttgccgcccgacaccgcccgcgcggccctgcaggccgcactcgacggcagc
cggtcgctggagcagagcggcccggcgttggacaccttgcaggccgacaccagcacctgc
gaacgccagctgcgccagttgctgcaccgcctgcagctggccgacgtcgaaggcctgcgc
caggtgcgcccgctgctgcccgccgaactcgaggtggccgacatggcagcgcgcgaggcc
caggtcgaactgcgccgcatcgacaccgaagacgccacactgcgtgccgacctgcagcgt
gtgcaaggcggcctcgaccggctggcggcccagggggagctggtgacgcggttgcgggtg
gacgaggcgcgggcgcggcgcgacagcgcctgggcgctggtgcgccgggcccatgtcgac
cgcggcctgtcgcccgaggctgccgcggccgagttcgcccgcctgcacgctggcccgggc
gatgtgtccgtcgtggccggcttcgagtcggccttgcggctggccgaccacctgagcgat
ttgttcagcgccgacaccgagcgcgccacgcagatccagctcgacagccaacgagtgcgc
gacatgcaggcggcccgcgtcgcgctggccgagcagcggcgccaggccgcacaggcggcc
gacgcggcggctgcggcctggcgcgcccgtctggcggcggccggcctgcccgacaccagc
cccgccgcgctgcgcgaatggcaagccgagctgggcgacgcactgcgcctggccgacgag
ctggacacgctgcgcgagcagcagcgcgcccagcaggcccgttgggctgccgcgatcgac
ctgttgcagcgggccctcgacccgctgcccggcctcggcggtcacgcaccggcgccgccg
accggcgaggtgccgctggccgcgcggctgcacaccttgcaagccgccgcagcgcgcgtc
aaggccgacctcgaccagcgtgcgctgcgcatcgaaggagtcaaaggccagcgtgtcgag
cgtgagcggcagcggcagctggcggcacagcggctggccgccgcccaaggcgccgtgacc
caggcgcagcatgcgctcgtgccgcacctcgggtggctgcaactgacgccggcagcctcg
gcctcggtggtgcgtgcccggttgcggcagctgttgcgctggcgcgagttgcagcaggcg
ctggccgcggccgacgccgtgatcgacggccacgacagcgcgctgcaactgctggagttg
caggccagcgaagtggcggcgctgctcggggaggcctgggtgcgcggcgccgcgtcagcg
ccggagcagggcggcacggcggcgcggctgctggtcgaccgcctgcaagcccggctcgaa
ggcgcgcgccacgccgccgaacggcgccgtgcgctggagcgcggcctggccgcggcgcaa
gcggccctggcccagcacgaacaacaggccgccgcgcagcaagcgctgctggcgcaatgg
gtggctgcggccggcgtcgacagcgcggcccaactgcccgacgccgaggcgcgctcgcag
cgacgccgcgacgccgcgcgcatggccgaagaagcgcagcgcaagctgcgccaggcgtcg
tcgcgctcggtcgaggagctgcggcgtttgctgcaaggccacgacgccgccgcgctcgag
cagcagctgcgtgccgcggccgacgcccgccaggcactcgacgagccggtgcgccaggcc
cgccaggccgaggaagcggcgcggcgagctttggccgagatcgacacctcggaccgggcc
gcgcaagcgcgcgagcagatggagcaggcgatggcgaccgtgcgctcgggcttggcgccg
tgggcccgcctgaggctcgcgcacgccctgctcgacgaatcgctgcgacgttttcgcgag
cgcgcacaaggcccgatgttgtcggccgcctcgggttacttcgcgcgcatgacggggggg
cgttacgcccggctgtcaagcgacgacagcggcgagcggccggtgttgctggcgcaccgc
gacgatggtgcgcgcatcacggtggcgcagatgagcgagggcacgcgcgaccagctctat
ctggcgctgcgcctggctgcgttggagctgcaccaggcgagcgggcagggcatgccgctg
gtgctcgacgacgtgctgatgacgtcggacgacgtgcgggcggggcggatgctgcaggcg
ttggcggcgtatgcacgcggcggcgccggtcggcaggtgttgatcttcacccaccatccg
catctgctcgacttggcgtgcagttcggtggacgacggcctgttggcgacccacgagctg
tga
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