Caldimonas brevitalea: AAW51_3007
Help
Entry
AAW51_3007 CDS
T04216
Symbol
truB
Name
(GenBank) tRNA pseudouridine synthase B
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
pbh
Caldimonas brevitalea
Brite
KEGG Orthology (KO) [BR:
pbh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
pbh03016
]
AAW51_3007 (truB)
Enzymes [BR:
pbh01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
AAW51_3007 (truB)
Transfer RNA biogenesis [BR:
pbh03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
AAW51_3007 (truB)
Prokaryotic type
AAW51_3007 (truB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
TruB-C_2
Motif
Other DBs
NCBI-ProteinID:
AKJ29698
UniProt:
A0A0G3BNY5
LinkDB
All DBs
Position
complement(3512835..3513800)
Genome browser
AA seq
321 aa
AA seq
DB search
MQAEASSSPVARPRVPRRAVHGVLLLDKPLGLSSNDALQKVKRLFRAEKAGHTGTLDPLA
TGLLPLCFGAATKFSQISLEADKTYRATLKLGVRTTTGDAEGEVLEERPVDVTPQHLLQA
CMRFMGPIQQVPPMYSALKRDGKALYEYARAGIEVEREPRQVVIHWIELLRWQEGALEIE
VRCSKGTYIRTLAEDIGEALGCGAHLTALRRTGSGPLTLEGAYTLAQLEAMSEAERDAVL
QPVDALLNDWPVLRLEAEDAGRFLSGMRRRTAHPDAPQLRVYGPQAGAFLGSGSVKAGEL
ISLRLLSPLEVQGLLNAQASQ
NT seq
966 nt
NT seq
+upstream
nt +downstream
nt
gtgcaagccgaagccagttcttctcccgtcgcgcgcccccgggtgccgcgccgtgcggtg
cacggcgtgctgctgctcgacaagccgctgggcctgagcagcaacgacgccctgcagaag
gtcaagcgtttgttccgcgccgagaaggccggccacaccggcacgctcgacccgctggcc
accggcttgctgccgctgtgtttcggtgctgccaccaagttttcccagatcagcctggag
gccgacaagacctaccgggcgactttgaagcttggcgtgcgcacgaccaccggcgacgcc
gaaggtgaggtgctcgaagagcgcccggtcgacgtgacgccgcagcacctgctgcaggcc
tgcatgcgcttcatggggccgatccagcaggtgccgccgatgtattcggcgctcaagcgc
gacggcaaggccttgtatgaatacgcccgggccggcatcgaggtggagcgcgagccgcgc
caggtggtgatccactggatcgagctgttgcgctggcaagaaggtgcgctcgagatcgag
gtgcgctgcagcaagggcacctatatccgcacgctggccgaggacatcggcgaagcgctc
ggttgcggcgcccacctgacggcgctgcgccgcaccggcagcggtccgctgacgctggag
ggcgcctacacgctggcgcagctcgaagcgatgagcgaggccgagcgtgacgcagtgctc
caaccggtcgacgctttgttgaacgactggccggtgctgcgactcgaagcggaagacgcc
ggtcgcttcctgagcggcatgcggcgacgcaccgcccaccccgacgcgccccagttgcgc
gtctacggcccgcaggccggtgcctttttgggcagcggcagcgtcaaggccggtgaattg
atatccctgcggttgttgagcccgctggaggtccaaggcctcctgaacgctcaagcatca
cagtga
DBGET
integrated database retrieval system
