Caldimonas brevitalea: AAW51_3332
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Entry
AAW51_3332 CDS
T04216
Symbol
rhlE
Name
(GenBank) RNA helicase
KO
K11927
ATP-dependent RNA helicase RhlE [EC:
5.6.2.7
]
Organism
pbh
Caldimonas brevitalea
Pathway
pbh03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pbh00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
AAW51_3332 (rhlE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pbh03019
]
AAW51_3332 (rhlE)
Enzymes [BR:
pbh01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
AAW51_3332 (rhlE)
Messenger RNA biogenesis [BR:
pbh03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
AAW51_3332 (rhlE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Utp25_C
HI1480
DegT_DnrJ_EryC1
DEDD_Tnp_IS110
P-loop_SecA
Motif
Other DBs
NCBI-ProteinID:
AKJ30023
UniProt:
A0A0G3BPV9
LinkDB
All DBs
Position
3923222..3924784
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AA seq
520 aa
AA seq
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MTFAELGLAEPIVRAVREQGYEQPTPIQLQAIPAVISGGDLLAGAQTGTGKTAGFTLPLL
HKLAAGQPTRDAKGRAAIRALILTPTRELAAQVEESVRVYGKYLPLKSMVMFGGVGMGPQ
IDALRRGVDILVATPGRLLDHHQQGTLDLSKIEYFVLDEADRMLDMGFIHDIKKVLAIVP
AQKQSLLFSATFSDEIKTLAERLLNKPQVIEVARRNTTAETIAQKIHPVDRDQKKELLAH
LIKSNDWHQVLVFTRMKHGANRLVEFLQKEEITAMAIHGNKSQGARTRALAEFKTGELQV
LVATDIAARGIDIDQLPHVVNYELPNVPEDYVHRIGRTGRAGAQGEAISLVCVDEEGFLR
DIEKLIKRQIPREVVAGFEPDPNAKPEPIKLGRMTLHGGVGGGGQGRGGDRSHGGGGRGG
QQGNRRPQGGGQGQGRPAAQGAGGGQGGRAPAPARAPAHAPHATHAPRATTNGASHGQPR
AQHAAPRANVGTGAGQPQQQQQRKPAPQGAALLGGKPPRR
NT seq
1563 nt
NT seq
+upstream
nt +downstream
nt
atgacttttgctgaactcggccttgccgagcccatcgtccgtgccgtgcgcgagcaaggc
tacgaacaacccaccccgattcaactgcaggccattccggccgtcatttccggcggcgac
ctgctcgccggtgcccagaccggcaccggcaagaccgccggcttcacactgccgctgctg
cacaagctggccgccgggcagcccacccgtgatgccaagggccgtgcggcgatccgcgcc
ctgatcctgacccccacccgcgaactcgccgcacaggtcgaggaaagcgtgcgtgtgtat
ggcaaatacctgccgctgaagtcgatggtgatgttcggcggcgtcggcatgggcccgcag
atcgacgcgctgcgccgtggcgtcgacatcctggtggccacgccgggccgtttgctcgac
catcaccagcaaggcacgctcgatctgagcaagatcgagtatttcgtgctggacgaggcc
gatcgcatgctggacatgggcttcatccacgacatcaagaaggtgctggccatcgtgccg
gctcagaagcagagcctgctgttctcggccaccttctcggacgagatcaagacgctggcc
gagcggctgctgaacaagccgcaggtgatcgaggtggcgcgccgcaacaccaccgccgag
accatcgcgcaaaagatccacccggtggaccgcgaccagaagaaggaactgctggcgcac
ctgatcaagagcaacgactggcaccaggtgctggtgttcacgcgcatgaagcacggtgcc
aaccgtctggtcgagttcctgcagaaggaagagatcacggcgatggcgatccacggcaac
aagagccagggtgcgcgcacccgggcgctggccgagttcaagaccggcgaactgcaggtg
ctggtggccaccgacatcgcggcccgcggcatcgacatcgaccagttgccgcacgtcgtg
aactacgaactgcccaacgtgccggaagactatgtgcaccggatcggccgcaccggccgc
gccggcgcgcaaggtgaggcgatctcgctggtgtgcgtcgacgaagaagggttcctgcgc
gacatcgagaagctgatcaagcgccagatcccgcgtgaggtggtggcaggcttcgagccg
gaccccaacgccaagcccgagccgatcaagctcggccgcatgacgctgcacggtggcgtc
ggcggcggcggccagggccgcggcggcgaccgctcgcatggcggcggcgggcgtggtggc
cagcagggcaaccggcgcccgcagggtggcggtcaaggtcaaggacgcccggcggcccag
ggcgccggcggcggccaaggcggccgtgcaccggcacctgcgcgcgctccggcgcatgcg
cctcatgccacacacgctccgcgtgcgacaacgaatggcgccagccatggccaaccgcgt
gcccaacacgcggcgccgcgcgccaatgtcggcaccggtgccggccagccgcagcagcag
caacagcgcaagcctgcaccgcaaggtgccgcgctgctcggcggcaagcccccgcggcgc
tga
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