Caldimonas brevitalea: AAW51_3906
Help
Entry
AAW51_3906 CDS
T04216
Symbol
topA
Name
(GenBank) DNA topoisomerase I
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
pbh
Caldimonas brevitalea
Brite
KEGG Orthology (KO) [BR:
pbh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pbh03032
]
AAW51_3906 (topA)
03400 DNA repair and recombination proteins [BR:
pbh03400
]
AAW51_3906 (topA)
Enzymes [BR:
pbh01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
AAW51_3906 (topA)
DNA replication proteins [BR:
pbh03032
]
Prokaryotic type
DNA Topoisomerases
AAW51_3906 (topA)
DNA repair and recombination proteins [BR:
pbh03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
AAW51_3906 (topA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_I
Top1B_N_bact
Motif
Other DBs
NCBI-ProteinID:
AKJ30597
UniProt:
A0A0G3BMG2
LinkDB
All DBs
Position
4633677..4634693
Genome browser
AA seq
338 aa
AA seq
DB search
MADTMPGFTRVKRGAGFAYLDTNGQPVRDKAQLQRIRQLAIPPAYTDVWICPLEDGHIQA
TGRDARGRKQYRYHAEWHAQRDADKFDRMLAFGAALPRLRARVKRDTERRGLPREKVLAT
IVHLLDTTFIRVGNDEYARTNGSYGLTTLRDRHADIQGDTVRLRFKGKSGVLHEVNVSDK
RIARIMRSCQDLPGQELFQYVDEDGEIRTVGSSDVNDYLRENTGEDFTAKDFRTWHASVQ
AIEWLMPIVAENKREAKRHIKEALTAVSSRLGNTVAVCRKSYVHPKVLECFTEGTLAQHC
EPCRRLRVPTRLLASEQRLMVFLQLSAKAAKASARKAK
NT seq
1017 nt
NT seq
+upstream
nt +downstream
nt
gtggccgacacgatgccgggtttcacacgcgtgaagcgcggcgcgggcttcgcctatctc
gatacgaacggccagccggtgcgcgacaaggcacagctgcagcgcatccggcaactcgcg
ataccaccggcctacacggacgtctggatctgcccgttggaggacggccatatccaggcg
accggccgagatgcgcgcgggcgcaagcagtaccgctatcacgccgaatggcatgcccag
cgtgacgcggacaagttcgaccgcatgctggccttcggcgccgcgctgccccggctgcgc
gcgcgcgtgaagcgcgacaccgaacgccgcggcctgccgcgcgaaaaggtgctcgcgacc
atcgtgcacctgctcgacacaaccttcatccgcgtcggcaacgacgaatacgcgcgcacc
aacggctcctacggcctgaccaccttgcgcgaccgccacgccgacatccagggcgatacg
gtgcggctgcgcttcaagggcaagagcggcgtcctgcatgaagtgaacgtcagcgacaag
cgcatcgcgcgcatcatgcgcagctgccaggacctgccgggccaggagttgttccagtac
gtcgacgaggacggcgagatccgcaccgtcgggtcgagcgacgtcaacgactacctgcgc
gagaacaccggtgaggacttcaccgccaaggacttccgcacctggcacgcctcggtgcag
gcaatcgagtggctgatgcccatcgtggccgagaacaagcgtgaggcgaagcgccacatc
aaggaagccttgaccgcggtgtcctcgcggctgggcaacacggtggcggtgtgccgcaag
tcctatgtccacccgaaggtgctggagtgcttcaccgaaggcacgctggcccagcactgc
gagccttgccgtcgtttgcgggtacccacacgcttgctcgcctcggaacagcgtctgatg
gtgttcctgcagctgtcggccaaggccgccaaggcgagcgcgcgcaaggcgaaataa
DBGET
integrated database retrieval system
