KEGG   Caldimonas brevitalea: AAW51_4484
Entry
AAW51_4484        CDS       T04216                                 
Name
(GenBank) ATP-dependent RNA helicase
  KO
K11927  ATP-dependent RNA helicase RhlE [EC:5.6.2.7]
Organism
pbh  Caldimonas brevitalea
Pathway
pbh03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:pbh00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    AAW51_4484
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:pbh03019]
    AAW51_4484
Enzymes [BR:pbh01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.7  DEAD-box RNA helicase
     AAW51_4484
Messenger RNA biogenesis [BR:pbh03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Helicases
     AAW51_4484
SSDB
Motif
Pfam: DEAD Helicase_C ResIII ERCC3_RAD25_C Fe-ADH
Other DBs
NCBI-ProteinID: AKJ31175
UniProt: A0A0G3BXB7
LinkDB
Position
complement(5299160..5300611)
AA seq 483 aa
MTEASEGPIAGGQFSSLPLDAKLQQAIADQGYTSMTPIQAKAIPIVLAGRDVMGAAQTGT
GKTAAFSLPLLQKMLKHENGSASPARHPVRALVLAPTRELADQVAANVKAYARHTQLRVA
VVFGGIDMNPQTAELRRGVEVLIATPGRLLDHIQAKNCTLSQVEYVVLDEADRMLDIGFL
PDLQRILSYLPTQRQTLLFSATFSPEIKKLAQSYLQEPVLVEVARPNATATTVEQRFYAV
EDDDKRRAVRHLLRERTLSQAIVFVNSKLGAARLARSLERDGLKTAALHGDKSQDERLKA
LEAFKRNEVELLVATDVAARGLDIADLPAVFNFDIPFNAEDYVHRIGRTGRAGASGLAVS
FVSRGDQRLVADIEKLIKKKIEIEPLELEEERLRRPPRRREDDEESSSQPSAPRHPRGYG
GYAMGSTTPSDPFFSKPYEADPSADPGWEKQPVGTPPALSRVASPYIKPKRKVAALLGGG
KKS
NT seq 1452 nt   +upstreamnt  +downstreamnt
atgaccgaagcttctgagggccccatcgcaggcggccagttttcctccctccctctcgac
gccaagctgcagcaggccatcgccgaccagggttacacctcgatgacgccgatccaggcc
aaggcgattcccatcgtgctggcaggtcgggacgtgatgggcgcggcccagacgggcacc
ggcaagacggccgcgttctcgctgccgttgctgcagaagatgctgaagcacgaaaacggc
agcgcctccccggcgcgtcacccggtgcgggcgctggtgctggcgcccacgcgcgagctg
gccgaccaggtggccgccaacgtcaaggcgtatgcacgccacacccagctgcgcgtggca
gtggtgttcggcggcatcgacatgaaccctcaaacggccgagttgcgccgcggggtcgaa
gtgctgatcgcgacgccgggccgtttgctcgaccacatccaggccaagaactgcacgctg
agccaggtcgaatacgtcgtgctcgacgaggccgatcgtatgctcgacatcggctttttg
cctgatctgcagcgcatcctgagctacctgccgacgcagcgccagacgctgttgttctcg
gccaccttctcgcccgaaatcaagaagctggcgcagagctatctgcaggagccggtgctg
gtggaagtggcgcggcccaatgcgaccgcgacgacggtggagcagcgtttctacgccgtc
gaagacgacgacaagcgacgcgcggtgcggcatctgctgcgcgagcgcacgttgtcgcaa
gccatcgtgttcgtcaattccaagctgggtgccgcccgcctggcgcgttcgctcgagcgc
gacggcctgaagacggcggcgctgcacggcgacaagtcgcaggacgagcggctcaaggcc
ctcgaggccttcaagcgcaacgaggtcgaactgctggtggccaccgacgtggcggcccgt
gggctcgacatcgccgacctgccggcggtgttcaacttcgacatccccttcaacgccgaa
gactatgtgcaccgcatcggccggaccggccgggccggcgcgtcgggtctcgcggtgtcc
ttcgtctcgcgcggcgaccagcggctggtggccgacatcgagaagctgatcaagaagaag
atcgagatcgagcccctcgaactcgaagaagaacgtctgcgccggccgccgcgccgccgg
gaggacgacgaggagtcgtcctcgcagccgagtgccccgcgccatccacgcggctacggc
ggctatgcgatgggctcgacgacacccagcgacccgttcttcagcaagccctacgaagcg
gaccccagcgccgacccgggctgggagaaacagccggtcggcacgccgcccgccctctcg
cgggtggcgtcgccctatatcaagccgaagcgcaaggtggcggcgctgctgggcggcggc
aagaagagctga

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