Caldimonas brevitalea: AAW51_4484
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Entry
AAW51_4484 CDS
T04216
Name
(GenBank) ATP-dependent RNA helicase
KO
K11927
ATP-dependent RNA helicase RhlE [EC:
5.6.2.7
]
Organism
pbh
Caldimonas brevitalea
Pathway
pbh03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pbh00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
AAW51_4484
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pbh03019
]
AAW51_4484
Enzymes [BR:
pbh01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
AAW51_4484
Messenger RNA biogenesis [BR:
pbh03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
AAW51_4484
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
ERCC3_RAD25_C
Fe-ADH
Motif
Other DBs
NCBI-ProteinID:
AKJ31175
UniProt:
A0A0G3BXB7
LinkDB
All DBs
Position
complement(5299160..5300611)
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AA seq
483 aa
AA seq
DB search
MTEASEGPIAGGQFSSLPLDAKLQQAIADQGYTSMTPIQAKAIPIVLAGRDVMGAAQTGT
GKTAAFSLPLLQKMLKHENGSASPARHPVRALVLAPTRELADQVAANVKAYARHTQLRVA
VVFGGIDMNPQTAELRRGVEVLIATPGRLLDHIQAKNCTLSQVEYVVLDEADRMLDIGFL
PDLQRILSYLPTQRQTLLFSATFSPEIKKLAQSYLQEPVLVEVARPNATATTVEQRFYAV
EDDDKRRAVRHLLRERTLSQAIVFVNSKLGAARLARSLERDGLKTAALHGDKSQDERLKA
LEAFKRNEVELLVATDVAARGLDIADLPAVFNFDIPFNAEDYVHRIGRTGRAGASGLAVS
FVSRGDQRLVADIEKLIKKKIEIEPLELEEERLRRPPRRREDDEESSSQPSAPRHPRGYG
GYAMGSTTPSDPFFSKPYEADPSADPGWEKQPVGTPPALSRVASPYIKPKRKVAALLGGG
KKS
NT seq
1452 nt
NT seq
+upstream
nt +downstream
nt
atgaccgaagcttctgagggccccatcgcaggcggccagttttcctccctccctctcgac
gccaagctgcagcaggccatcgccgaccagggttacacctcgatgacgccgatccaggcc
aaggcgattcccatcgtgctggcaggtcgggacgtgatgggcgcggcccagacgggcacc
ggcaagacggccgcgttctcgctgccgttgctgcagaagatgctgaagcacgaaaacggc
agcgcctccccggcgcgtcacccggtgcgggcgctggtgctggcgcccacgcgcgagctg
gccgaccaggtggccgccaacgtcaaggcgtatgcacgccacacccagctgcgcgtggca
gtggtgttcggcggcatcgacatgaaccctcaaacggccgagttgcgccgcggggtcgaa
gtgctgatcgcgacgccgggccgtttgctcgaccacatccaggccaagaactgcacgctg
agccaggtcgaatacgtcgtgctcgacgaggccgatcgtatgctcgacatcggctttttg
cctgatctgcagcgcatcctgagctacctgccgacgcagcgccagacgctgttgttctcg
gccaccttctcgcccgaaatcaagaagctggcgcagagctatctgcaggagccggtgctg
gtggaagtggcgcggcccaatgcgaccgcgacgacggtggagcagcgtttctacgccgtc
gaagacgacgacaagcgacgcgcggtgcggcatctgctgcgcgagcgcacgttgtcgcaa
gccatcgtgttcgtcaattccaagctgggtgccgcccgcctggcgcgttcgctcgagcgc
gacggcctgaagacggcggcgctgcacggcgacaagtcgcaggacgagcggctcaaggcc
ctcgaggccttcaagcgcaacgaggtcgaactgctggtggccaccgacgtggcggcccgt
gggctcgacatcgccgacctgccggcggtgttcaacttcgacatccccttcaacgccgaa
gactatgtgcaccgcatcggccggaccggccgggccggcgcgtcgggtctcgcggtgtcc
ttcgtctcgcgcggcgaccagcggctggtggccgacatcgagaagctgatcaagaagaag
atcgagatcgagcccctcgaactcgaagaagaacgtctgcgccggccgccgcgccgccgg
gaggacgacgaggagtcgtcctcgcagccgagtgccccgcgccatccacgcggctacggc
ggctatgcgatgggctcgacgacacccagcgacccgttcttcagcaagccctacgaagcg
gaccccagcgccgacccgggctgggagaaacagccggtcggcacgccgcccgccctctcg
cgggtggcgtcgccctatatcaagccgaagcgcaaggtggcggcgctgctgggcggcggc
aagaagagctga
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