Caldimonas brevitalea: AAW51_4880
Help
Entry
AAW51_4880 CDS
T04216
Symbol
rpoA
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
pbh
Caldimonas brevitalea
Pathway
pbh03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
pbh00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
AAW51_4880 (rpoA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pbh03021
]
AAW51_4880 (rpoA)
03400 DNA repair and recombination proteins [BR:
pbh03400
]
AAW51_4880 (rpoA)
Enzymes [BR:
pbh01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
AAW51_4880 (rpoA)
Transcription machinery [BR:
pbh03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
AAW51_4880 (rpoA)
DNA repair and recombination proteins [BR:
pbh03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
AAW51_4880 (rpoA)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_L
RNA_pol_A_CTD
RNA_pol_L_2
HHH_XRCC3_RpoA
Motif
Other DBs
NCBI-ProteinID:
AKJ31571
UniProt:
A0A0G3BW17
LinkDB
All DBs
Position
complement(5726806..5727792)
Genome browser
AA seq
328 aa
AA seq
DB search
MQTNLLKPKAINVEPLGGHRAKVTLEPFERGYGHTLGNALRRVLLSSMVGYAPTEVTIAG
VLHEYSTIDGVQEDVVHIMLNLKGVVFRLHNREEVTLVLRKEGEGAVTAGDIQTPHDVEI
INPDHVIAHLSQGGKLDMQIKVEKGRGYVPGNLRRFGDEPTKSIGRIVLDASFSPVRRVS
YTVESARVEQRTDLDKLVMEIETNGAISPEEAIRASAKILVEQLAVFAQLEGSEIAAFDQ
PAQRSQQFDPILLRPVDELELTVRSANCLKAENIYYIGDLIQRTETELLKTPNLGRKSLN
EIKEVLASRGLTLGVRLENWPPSGLDKR
NT seq
987 nt
NT seq
+upstream
nt +downstream
nt
atgcaaaccaatctgctgaaacccaaagccatcaacgtggagccgctgggcggccaccgc
gcgaaggtcacgctcgagccgttcgagcgcggctacggccacacgctgggcaatgcgctg
cgtcgtgtgctgctgtcgtcgatggtgggttacgcgccgaccgaagtgacgatcgcgggt
gtgctccacgagtactcgacgatcgacggcgtgcaggaagacgtcgtgcacatcatgctg
aacctcaagggggtggtgttccgcctgcacaaccgcgaggaagtcacgctggtgctgcgc
aaggaaggcgagggcgccgtcaccgccggtgatatccagacgccgcacgacgtcgagatc
atcaacccggaccacgtgatcgcccacctgtcgcaaggcggcaagctggacatgcagatc
aaggtcgagaagggccgtggttatgtccccggcaacctgcgccgtttcggtgacgagccg
accaaatcgatcggccgcatcgtgctggacgcttcgttctcgccggtcaggcgtgtcagc
tacaccgtcgaaagcgcccgcgtcgagcagcgcaccgacctcgacaagctggtgatggag
atcgaaaccaacggcgccatttcgcccgaggaagcgatccgcgcatcggccaagatcctg
gtcgagcagttggccgtgttcgcacagctggaaggcagcgagattgccgcgttcgaccag
ccggcgcaacgcagccagcagttcgacccgatcctgctgcgcccggtcgacgagctcgaa
ctgacggtgcgctcggccaactgcctgaaggccgagaacatctattacatcggcgatttg
atccagcgcaccgagaccgagctgctcaagaccccgaacctgggtcgcaagtcgctcaat
gaaatcaaggaagtgctggcttcgcgcggcctcacgctgggcgtgcggctcgagaactgg
ccgccgtccggcctcgacaagcgttaa
DBGET
integrated database retrieval system
