Python bivittatus (Burmese python): 103052772
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Entry
103052772 CDS
T03091
Symbol
PARN
Name
(RefSeq) poly(A)-specific ribonuclease PARN isoform X3
KO
K01148
poly(A)-specific ribonuclease [EC:
3.1.13.4
]
Organism
pbi
Python bivittatus (Burmese python)
Pathway
pbi03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pbi00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
103052772 (PARN)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pbi03019
]
103052772 (PARN)
Enzymes [BR:
pbi01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.4 poly(A)-specific ribonuclease
103052772 (PARN)
Messenger RNA biogenesis [BR:
pbi03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Other 3'-5' decay factors
103052772 (PARN)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
CAF1
RNA_bind
R3H
RRM_Thc1
RRM_1
NCBP3
Motif
Other DBs
NCBI-GeneID:
103052772
NCBI-ProteinID:
XP_007435966
UniProt:
A0A9F2WGT0
LinkDB
All DBs
Position
Unknown
AA seq
577 aa
AA seq
DB search
MDFLLFQFGLCTFKYDHAESKYIMKSFNFYIFPKPFNRTSPDVKFVCQSSSIDFLANQGF
DFNKVFRNGIPYLNQEEERQLREQYDEKRSQANGLGALSYMSPGTNKRPSAIPEDQKKFI
EKVIERIEGLLQNEESTNIQLEPCTGFQRKLIYQTLSWKYPKGIHVETLETEKKERYMVI
SKVDEEERKRRGQQKQAKEQEELKDAVGFSRVIHALANSGKLVVGHNMLLDVMHTIHQFY
CSLPEDFSEFKELATCVFPRLLDTKLMASTQPFKEIIKNTSLAELEKRLKEVPFNPPKVE
SAEGFPSYNTASEQLHEAGYDAYITGLCFISMANFLGSFLSPPQNHVSASSKLIEPFFNK
LFLMRVMDIPYLNLEGPDLQPKRDHVLYVTFPKEWKTSDLYQLFSAFGNIQVCWIDDTSA
FVSLSQPEQVQIAVNTSRYAESYRIQTYAEYIEKKHEEKRQAKRKWAEDSWKEVEVKRLK
TQASPYALQSRYYSVNSFSTPSAVGKRSMSPIQEESATDDLEEAAVQGVDLAHPDTFLEP
IEGKKQVKKFKKAKKEQALGGGLKAAPTRLFDVPDTW
NT seq
1734 nt
NT seq
+upstream
nt +downstream
nt
atggatttcttgctgttccagttcggcctgtgcacttttaaatacgaccacgcggaatct
aaatatatcatgaaatcatttaacttctacatcttccccaaacctttcaacagaacatca
ccagatgtcaagtttgtctgtcagagctcaagtatagattttttagcaaaccagggattt
gattttaataaagtttttcgcaacggtatcccttacttaaatcaagaagaagaaagacag
ttacgggagcaatatgacgagaagcgttctcaagccaatgggctgggggccttgtcatat
atgtcacctggtaccaataagcgtccatcggctattcctgaggatcagaagaagttcatc
gagaaagtcatagaaaggatagaaggtctcttgcagaacgaagaaagcaccaacatccag
ctggagccgtgcacagggtttcagaggaaactaatctatcagacgctgagctggaagtat
ccaaaaggcatccatgttgaaactctggaaacagaaaagaaggaacgatacatggtcatc
agcaaagtggacgaagaggagcgcaagagaagagggcaacagaagcaagcgaaggagcag
gaggaactgaaggacgctgtggggttttcacgagtcattcacgcccttgcaaattctggc
aagcttgtggtcggacacaacatgttactggatgtcatgcataccatccaccagttctac
tgctccctcccagaggatttcagtgagttcaaagaactagcaacatgtgtctttccaagg
ttattggacactaaattgatggcaagcactcagccattcaaggagattattaagaacaca
tccctggcagagttggaaaagcgtctgaaggaggtgcccttcaaccctccaaaagttgaa
agcgccgaagggtttcccagttacaacacggcttcagagcagcttcacgaagctggttat
gatgcctatatcacaggcctctgcttcatctccatggcaaacttcttaggttcatttctc
agccctccccaaaatcatgtatctgccagttcaaagctgatagagccttttttcaacaaa
ttatttctgatgagggtgatggacattccatatctcaatttggaaggaccagatttacaa
ccaaaacgtgatcatgtcctttacgttacgtttcccaaagagtggaagacaagtgacctt
taccagctttttagtgcttttggaaacattcaagtgtgctggattgacgatacctcagca
tttgtgtctttgagccagcctgaacaagtacagattgcagttaataccagcaggtacgca
gaaagttaccggatccagacttatgcagaatatattgaaaagaaacatgaggaaaagagg
caggcaaagagaaaatgggcagaagacagttggaaggaagtcgaggtgaaacggttaaaa
acacaggccagcccatatgcccttcaaagccgatactacagtgttaacagtttctcaact
cctagtgctgtggggaagagaagcatgagccccatccaagaggagagcgccacagatgac
ctggaggaagccgcggtccaaggggtggacctggcccacccagacaccttcctggagccc
atagaagggaagaaacaggtcaagaagttcaagaaagccaaaaaggagcaagctttgggt
ggggggctcaaggccgctcccaccaggctctttgatgttccagacacatggtag
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