Python bivittatus (Burmese python): 103053594
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Entry
103053594 CDS
T03091
Symbol
SETX
Name
(RefSeq) probable helicase senataxin
KO
K10706
ATP-dependent RNA/DNA helicase, senataxin [EC:
5.6.2.5
5.6.2.3
]
Organism
pbi
Python bivittatus (Burmese python)
Brite
KEGG Orthology (KO) [BR:
pbi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pbi03021
]
103053594 (SETX)
Enzymes [BR:
pbi01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.3 DNA 5'-3' helicase
103053594 (SETX)
5.6.2.5 RNA 5'-3' helicase
103053594 (SETX)
Transcription machinery [BR:
pbi03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
103053594 (SETX)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AAA_11
AAA_12
SEN1_N
AAA_19
AAA_30
Viral_helicase1
UvrD-helicase
AAA_16
AAA_22
Cep57_CLD_2
SLFN-g3_helicase
Helicase_RecD
FapA
nSTAND3
Motif
Other DBs
NCBI-GeneID:
103053594
NCBI-ProteinID:
XP_025020534
UniProt:
A0A9F5ITJ4
LinkDB
All DBs
Position
Unknown
AA seq
2601 aa
AA seq
DB search
MSTCCWCTPGGPATVKVLKSYVSDALSPKDVAAANDDLCYCLECVEEYHKARDEVPSLHK
ILWEREVTRLTNHFEKSMKEGDEDDLYLVEEDRVTPLTSCYTGPNFEKRLRVPLLEVLKY
PYLLLHERLSELCVDALCKMEEMNYSYQVVGKHPGIYLLMVHPNETIRRWAILTAQNLGK
VDRDDYYDIQEVLMCLFKVIELGLFENPDIYSSSGVEKTKLVLLPLHLYDTTNYKNYWLG
LCMLLSVLEEQAMDSLLLGPDKQNFMQSILNIMKKQTDGEINDPFWPILHCFMVILDKLG
SKVWGQLVDPIQAFHAIINNASYKKEIESIRQSCHRTKSEPLSDYGDLTMTCSQIVYSYS
PEKPHKDSRLRTAAYLDYCPNFYEDMQTLRDMFQYDIGRDMRLHHSTFLWFIPFVHSLMD
LKDLGVAFSVVVIHHLYSEIKEVLHNAIQPRDKVSGFFIWILVAVVEQSLKKKCFTTLWI
TSEQWVEVVVKCAILPSMAFTCGAERGLARNEPKSIAKTPSWEPDSIQSACMNLIRVLLK
EGYQIEEKASPFLDELNLLRRSHEDWKLSPQQVQELQACLTEIVRSLRNKSLNASSHGES
HTSCVVSSSLSRKQDGRSPVHLPQEHSSCQSPKRQDEVFRERSLSEGRNEGPKGAICREQ
SHQRNSEFHVVNIKQEPKESLLHEDSKSHSPLAGGCMDAQNSGNFHPTPVDQNGSLNKSS
FDKGFQKKGAEDINEKEEKPRIVQADLNHWNSNPASGEKMLPKIIAEKKSSKAELTSKLK
QLVENKKRGNTMLGPESEKQQSVEENQGQEGTKRRIARDGSCTSNRVHCKPVLSSDDCFQ
VDILSIKKEPTDNLVEFTRTLKGGEDSEESSTDDELNVPLLEIREKLLKKRSIVPASRVT
EPKIERDSKLSLVACQESTLSYQNPIQRKVQGALRSLSESENGKLSSGAGESSNHVIIIS
DTSSDEEENKVNFGRKSKEENGSVSLPKDLDAKERDLVTVSSSPLLYGECESQCFEFETD
EEIYSAWQDSQLDMSEADVSPVKTTGRSTSCDLEFTRQPSERDYDTDYLGDDIIEKAEQE
LEQQVKDCKTKPKLPVQADEEGVSKGSIAICSKYFTAIPADGRESSRQSEPITSSTPSAA
AAAGPVAPLLVAKESTSGPRKSLAKSSWINTAQRSPEKRNIKTEKKSPHAGLSRSTRPFV
VPPKKVHHFPEPTSTVEKLGLKKRARRAADLSQRTQDSLAQLRSHGKTAGELPQKRRAKL
IEPRKMVVRNKKLLASQECQFFRQSRPKKRGKDQDVQGEHPRAQVGEGAKRAVPKSFMQS
TSKMMVENLKERPGQASSSSNCVKKLLPQHSREEVRSPTIPLSPAREALPSSRQDPITPD
PNAQGGTTGAPGNVCSSVSEGSRANPCVLAGSSSSWCNKSVDLNENGSTLKEDVNQDEDD
LFLTQRDPVDMELCSQMESHSRPEDIELDVLPTLQDQHQGAEKCRHTGCTKRVDEGRLFC
QSHTVPDAPDHVFAKPCALSRPPTKKVFSANASSCVASLSRDLETRPTPLAMKTKSNPAI
PPALKVDGLRTKLTLANILRSQNLNNISQPHNVRNSHVVGNASKMPVPHSGTGQEARPSF
AQASSTHSQHRDHRFFTKCILKWSYDMFANSRELGPPNHLLQAIVNPVPVKFQNYDDYFN
IFFPLMILNAFEEVACEWLENQKMKEQKPFYLNILNFNMDMNNADFTANISQHDLDNQHH
PKEDDLVFLIGSDKRSSYDEQEGKKCVVRHVGFVTRFSHSSVHGTKKKEQQITCHLSIQT
QGNLSRIDKEVKCIVVSSLATTQRRFQALLMLKRSPLAMPILCPSSSYFSPRDLNTESEK
PVSYMKDFNEDQRRAIESAYAMITQHPTLPKVCLIHGPPGTGKSNMIVGLLHRILGERSG
NENPVQRLNTKIKRNRVLVCAPSNAAIDHLMKKIISEFKKLSGKNPLGNCGNINLVRLGQ
QKSINSKVRKFSLNDQIDHKINKAMLGKVQDLQKKKEDLDRRLDMLSRQRAMDRSEKKQQ
LDEEIRHLSKEREHLASQLKEARGRSQELKASIILESHIICCTLSTSGGELLKSAFRRLG
GDPVSCVIVDEAGQTCEIETLIPLIYDCKKLVLVGDPKQLPPTIKSMKAQDYRYDQSLLG
RLCRHLRDQDQENAFGKCPVFQLKIQYRMHPEICLFPSKYIYEGVLITDRKTAEDRFSLE
WHFQPYLLFDVLDSREERENDSYFNPQEVKLLTELMKVIKGTKKDISCHQIGIVTPYNAQ
KRRIQKQLDKEFGENSAGEVDTVDGFQGREKDCIIVTCVRANSSQGSIGFLRSLQRLNVT
ITRAKYSLFILGKLKTLMENKDWNELIQDAQRRGNIVQTSKNSYKSSALKILKSRPFPRS
GVTAPEREAQGHPGTSGAKQPGVSRQDAHHPPIPLPTPASSRTPPEPPTHRPPPSAQAKP
VQERPQDPRLLRRAESVLKANNRKEGPAPGLRPASAQMSPELLAARSRSHSMPQPDALQE
ASSHFVPAGHVWNTHLPSKVPCAQAPDQRTPIQTKPLKTWGQGDPAKPLEWKKDQDSRRR
TVEVSQEKAGPMDPKRRRTTF
NT seq
7806 nt
NT seq
+upstream
nt +downstream
nt
atgagtacatgctgttggtgtacaccaggtggtcctgccaccgtaaaggtgttgaagagc
tatgtttctgatgccctgtctccgaaggatgttgctgcagccaacgatgacctctgttac
tgtctggaatgtgtggaagagtaccataaagcaagagatgaggtcccatccttgcacaag
attctgtgggagagggaagttacccgtctcactaaccactttgagaaatccatgaaagag
ggtgatgaagatgacctctacttggtggaagaagacagagttaccccgttgacctcctgt
tacaccggtcctaattttgagaaacgtctccgggtgccgctgctagaagttctaaagtat
ccctacctgctacttcatgaacgtctcagtgagctctgtgttgatgccctttgtaaaatg
gaggaaatgaactactcctatcaagtagttggcaaacatcctggtatctatttgctcatg
gtgcaccccaacgaaacgatccgccgatgggccatcctgacagctcaaaacctgggaaaa
gtagacagagacgattattacgatatccaagaagtgctgatgtgtttgttcaaagtcata
gaactgggtctctttgaaaatccagatatctatagctcatcaggggttgagaaaaccaag
cttgtcctgttgcctttgcatctgtatgataccaccaattacaaaaactattggcttggc
ctctgtatgctgctctcggtgctagaagaacaagcaatggattctttgctgcttggacca
gacaagcaaaatttcatgcagtccatcctgaacatcatgaagaaacaaacagatggtgaa
atcaatgacccgttttggcccatcctccactgtttcatggtgatcttggataagctgggg
tccaaagtgtggggtcagctggtggacccaatccaggcgtttcacgccatcatcaacaac
gcaagctataagaaggaaatagagagcattcgccaaagctgccacaggacaaaatccgaa
ccactgtcagactacggggatctaacaatgacttgcagccagattgtatatagctacagc
cctgaaaaacctcacaaggactcaagattgaggactgctgcttacttggactattgccca
aacttttatgaagacatgcagacactgcgggacatgttccagtatgacattggtcgagac
atgcgcttgcaccatagcacttttctctggttcattccctttgtccattcccttatggat
ctcaaggacctgggcgttgccttcagtgtagttgtcatccaccacctgtattcggaaatc
aaagaggtcctccacaacgcaatccaacctcgtgacaaagtgtctgggtttttcatctgg
atcctcgtggcggtcgttgagcaaagtttaaaaaaaaaatgcttcaccactttgtggatc
acctcggagcaatgggtggaggtggtggtgaaatgcgccatacttccgagtatggcgttc
acctgtggtgcggagagggggttggccagaaacgagcccaaaagtattgcaaaaacacca
tcttgggaacctgattcgatacagtctgcttgcatgaatttgatccgggtcctcctaaag
gagggctaccagatcgaagaaaaggcatccccgttcctcgacgagctaaatttgcttcgg
cgtagtcatgaggactggaagctgagcccccagcaggtgcaagaattacaggcgtgtttg
actgagatcgtaagaagcctccggaataaatcattaaatgcttcctcccacggagagagt
cacacaagttgcgttgtgtcatccagtctctccagaaaacaagatgggagaagtccagtc
catcttccccaagaacactcatcctgtcaatcaccaaaaaggcaggatgaagtttttcga
gaaagatcattgtctgagggaagaaatgagggaccaaagggagccatttgtagagaacaa
agccatcagagaaattcagagttccacgtggtcaacattaaacaggaacctaaagagagt
ttactacatgaagacagtaagtcacactctccattagcagggggatgcatggatgcccag
aacagtggaaactttcaccctacaccggtggaccagaacggttccctaaacaaaagcagt
tttgacaaaggctttcagaagaaaggggctgaagatatcaatgagaaggaagagaaaccc
agaattgtccaagctgatctcaaccactggaacagcaatcctgcttcaggagaaaaaatg
cttccaaaaattattgcagaaaaaaagtcaagcaaagctgagttgacttcgaaattaaaa
cagcttgttgagaataagaagagaggaaataccatgctagggccagagagtgaaaagcag
cagtctgttgaggagaatcagggtcaggaaggaacaaagagaagaattgcaagagatggc
agttgtacatcaaatcgggtacactgcaaaccagtgctaagttcagatgattgttttcaa
gttgacattctttccataaaaaaggaacccactgataatttggtggaatttacgagaaca
ttgaaaggtggggaagattcagaagaaagtagcacagatgatgaacttaatgttcccttg
ttggagattagagagaagctgctgaagaagagatctatagtccctgccagccgagtgaca
gagcctaaaatagagagagacagtaaattgtccttagttgcctgtcaagaaagtacctta
agttaccagaatcctattcaaaggaaggttcaaggggcacttagatcattgtctgagagc
gaaaatggcaagttgtcttctggagcaggtgaatcctcaaaccacgtcatcatcatttca
gacacttcttcagatgaagaagagaacaaagtgaactttggtcgaaaaagcaaagaagaa
aatgggagtgtgtcccttccgaaggatcttgatgccaaagaacgagatcttgtaacagtc
tccagttctccattgctgtacggggaatgtgaatcacagtgttttgagtttgaaaccgat
gaagagatctactccgcttggcaagatagccagctagacatgtcggaggcagatgtctct
ccagtgaagacaactggcaggtccacatcctgtgacttagagtttacaaggcagcctagt
gaacgggattacgatacagactatcttggggatgatattattgaaaaagctgagcaggaa
ctggaacagcaggtgaaagattgtaaaaccaaaccgaagcttcctgtccaggctgatgaa
gaaggtgtcagcaagggaagcatagccatttgctcaaagtatttcacagccatacctgct
gatggtagggagtcttccagacagagtgagccaattacatccagtacaccatcagctgca
gcagcagctggacctgtggcaccattactggttgccaaagaatccacttctggcccaagg
aagagtctggcaaaatccagttggatcaacacagctcagcggagtcctgagaaaagaaat
atcaagacagaaaagaaatcgccacatgcagggctgtctagatccactcgtccttttgtg
gtccctcccaagaaagtccaccattttcctgagccgacatcaactgtggaaaagctgggc
ctgaaaaaaagagcccgcagagcagctgacctctcccagcggactcaagacagcctcgcc
cagttgcgcagccatggaaaaacagctggggagcttccccagaaaaggagggccaaacta
attgaacctcgcaagatggttgttcggaacaaaaagctgttagccagccaggagtgtcag
ttcttcagacagtcgagacctaaaaaaagagggaaagatcaggatgttcagggagaacat
cctagggctcaagttggagaaggagcaaagagagctgttcccaagtccttcatgcagtct
accagcaagatgatggttgaaaatctaaaagaaaggcctggccaggccagtagttcttct
aactgcgtgaagaaattgctaccacagcattcacgagaggaggtcaggtcccctactata
cctctttctccagcaagagaggctcttccatcctcaaggcaagaccctatcacgcctgac
ccaaatgctcaaggaggtaccactggtgctccaggcaatgtctgctcttctgtaagtgaa
ggcagtagagccaacccttgtgtcttggcaggttcctcttccagttggtgtaacaagagt
gtggatttgaatgagaatgggtctaccttaaaggaggatgttaaccaggatgaggatgac
ttattcctgacgcaaagggatccagtggacatggagctttgttcgcaaatggaaagtcat
agtcgcccggaagacatagaattagatgttctcccaaccttgcaggatcaacaccaaggc
gctgagaagtgcagacatacaggatgtactaaaagggtggatgaaggaaggctgttctgc
caaagtcatactgtgcctgacgcaccagaccatgtctttgccaagccctgcgcgctttcc
aggcctcccacaaagaaagttttcagcgccaatgcttcttcatgtgtcgccagcctctcc
agagacctagaaaccagacccacccctttagcaatgaagaccaaatccaatccagccata
cctcctgcattgaaggtagatggtttgaggaccaagctaactcttgccaatatccttcga
tctcagaatttgaataacatctcccagccacacaatgtacgaaacagccatgttgttggt
aatgccagtaagatgcctgttccacactctggcactggacaggaagcacgcccatccttt
gcacaagccagcagtactcacagccagcatagagaccaccgatttttcaccaaatgcatc
ctgaagtggagttatgatatgtttgccaactccagagagcttgggccaccaaatcacctc
ttgcaggcaatagtgaaccctgttccagtcaaatttcagaactatgatgactattttaac
attttcttccccttgatgatcctcaacgcctttgaagaggtggcatgtgaatggctggag
aatcagaagatgaaagagcagaagcctttctacttgaacatactgaacttcaacatggat
atgaacaacgcagatttcacagccaacatttcccagcatgatctggacaatcagcaccac
cccaaggaggatgacttggtcttcctaatagggtctgacaaacggtcctcctatgatgaa
caagaggggaagaaatgtgtagtgcgccatgttggcttcgtgactcgtttttctcattct
tccgttcatggtactaaaaagaaagagcaacagattacttgtcacctctccatccagact
caaggaaatctgtcccgtattgacaaagaagtgaaatgcattgtggtcagctccttggcg
acgacacagcgaaggttccaggccctcttgatgctgaaacgaagcccactagccatgcca
atcctgtgtccaagctcctcctacttctctccaagagatttgaacaccgagtctgagaaa
cctgtttcttacatgaaggacttcaatgaagatcaaaggcgagctattgaaagtgcttat
gccatgataacacagcacccaactttgcccaaggtctgcttaatccatggaccacctggg
acagggaaatcaaacatgattgttgggcttctccaccgcatccttggcgagagatcggga
aacgagaatcccgtgcagaggctgaataccaagatcaagaggaaccgtgtgttggtttgt
gcaccctctaatgctgccattgatcatctcatgaaaaaaataatttcggaattcaaaaaa
ctcagtgggaaaaatcctttaggcaattgcggcaacataaacctggtcaggctaggacag
caaaaatcgatcaacagcaaagtccggaaattcagcttgaacgatcagattgatcacaag
atcaataaagcaatgcttggcaaagttcaagatctccaaaagaagaaggaagatttggat
cgacggttggacatgctttctcgccaacgggccatggacagaagcgagaagaaacagcag
ttggatgaggaaattcgccatctttccaaggagagggagcatctggcttctcaactgaaa
gaggctcgcgggcgatctcaggaattgaaagcaagcatcatcttggaatcccacatcatt
tgctgcaccctgagcacaagcggaggggagctgctgaagtcagctttccggaggctgggt
ggggaccccgtgagctgcgtcattgtggatgaggcagggcagacgtgtgaaattgagacc
ctcattccgctgatttatgactgtaagaagctggtcctggtcggagaccccaaacagctc
cctcccaccataaagtccatgaaagcacaggattacagatacgaccagtctctgctaggc
cgcctctgcaggcatcttagggaccaagatcaagaaaatgcttttggaaaatgtccagtc
tttcagctgaaaattcagtatcggatgcacccagagatctgcctttttccttccaagtat
atctacgaaggggtcttgatcacagacaggaaaacagcagaagatcgcttctcattggag
tggcatttccaaccctacttgctttttgatgtcttggacagccgcgaagaacgagaaaac
gactcctattttaatccccaagaagtgaagctgttgacagaattaatgaaggtaattaag
gggacaaagaaggacattagttgccatcaaattggaatcgtcactccttataatgcgcag
aaaaggagaatacagaaacagctggataaagagtttggagaaaatagtgctggggaagtt
gacaccgtggatggattccagggccgcgagaaagactgcatcattgtcacctgcgtccgg
gcaaacagctcacaaggatcaattgggtttttgaggagtctccagcgcctgaatgtcaca
atcacccgagccaaatacagccttttcatccttggaaagctgaaaacactaatggagaac
aaagattggaacgagttgatccaggacgcccagcggagaggcaacatcgtccagacgtcc
aagaacagttacaaaagcagtgccttgaagatcctcaagtccagaccatttccccgctcc
ggcgttacggcgccggaaagggaagcgcaagggcacccaggcacaagtggagccaagcag
ccaggcgtctcccgccaagatgcccaccaccctccaatcccacttcccactcccgcaagc
agcaggacccctccagagccacctacccaccggccacccccttcggcgcaggccaaacct
gtccaggaaagaccgcaggatcctcgtctgctcagaagagcagagtcggtgttaaaagca
aacaaccgcaaggagggtccagcgcctggtttgagaccagcctcggcacagatgtcccct
gaacttctggctgctcggagccgcagccattccatgccacagccggacgctctgcaggaa
gcatcaagccactttgtcccagctggacacgtgtggaacacacacctgccaagcaaagtg
ccctgcgcccaagcccccgaccagagaacccccatccagaccaagccgttaaagacttgg
ggccaaggagaccctgccaagcccctggaatggaaaaaagaccaggactctcgcaggagg
acagtagaagtgtctcaggagaaggcaggtcctatggaccccaagcgtaggcgcaccacc
ttttga
DBGET
integrated database retrieval system