Python bivittatus (Burmese python): 103056413
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Entry
103056413 CDS
T03091
Name
(RefSeq) collagen alpha-1(V) chain isoform X1
KO
K19721
collagen type V/XI/XXIV/XXVII, alpha
Organism
pbi
Python bivittatus (Burmese python)
Pathway
pbi04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
pbi00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
103056413
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
pbi00536
]
103056413
Glycosaminoglycan binding proteins [BR:
pbi00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
103056413
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Collagen
COLFI
Motif
Other DBs
NCBI-GeneID:
103056413
NCBI-ProteinID:
XP_007435277
UniProt:
A0A9F2WHU9
LinkDB
All DBs
Position
Unknown
AA seq
1321 aa
AA seq
DB search
MLMLPFRFSGGGDSSSKGPLVSAQESQAQAILQQARLALRGPAGPMGLTGRPGPMGPPGG
GGIKGEPGDMGPQGPRGVQGPPGPSGKPGRRGRAGSDGARGMPGQTGPKGDRGFDGLAGL
PGEKGHRGDPGPSGPPGAPGEDGERGDDGEVGPRGLPGEPGPRGLLGPKGPPGPPGPPGI
AGMDGQTGPKGNVGPQGEPGPPGQQGSPGAQGLPGPQGPIGAPGDKGPLGKPGLPGMPGA
DGPPGHPGKEGPPGEKGTQGPAGPQGPIGYPGPRGVKGADGIRGLKGTKGEKGEDGFPGF
KGDMGIKGDRGEIGPPGPRGEDGPEGPKGRGGPNGEPGPLGPAGEKGKLGVPGLPGYPGR
LGPKGSIGFPGFAGANGEKGGRGTPGKPGPRGQRGPTGPRGERGQRGITGKPGPKGNSGG
DGPPGPPGERGPPGPQGPTGFPGPKGPPGPPGKDGLPGHPGQRGETGFQGKTGPPGPPGV
VGPQGPTGETGPMGERGHPGPPGPPGEQGLPGLAGKEGTKGDPGPAGLPGKDGPPGFRGF
PGDRGLPGPIGPVGLKGNEGPPGPPGPAGSPGERGPAGAAGPIGLPGRPGPQGPSGPAGE
KGTPGEKGPQGPAGRDGIQGPVGLPGPAGPVGPPGEDGDKGEIGEPGQKGNKGDKGEQGP
PGPIGPQGPIGQPGPAGADGEPGPRGQQGLFGQKGDEGPRGFPGPPGPVGLQGLPGPPGE
KGETGDVGQMGPPGPPGPRGPGGPPGADGPQGPSGGIGNPGAVGEKGEPGEAGEPGLPGD
SGPLGPKGERGEKGEAGPSGAAGPPGPKGPPGDDGPKGSPGPVGFPGDPGPPGEPGPAGQ
DGPAGDKGDDGEPGQTGSPGPTGEPGPSGPPGKRGPPGPAGPEGRQGEKGAKGESGLEGP
PGKTGPVGPQGPPGKPGPDGLRGIPGPVGEQGLPGSPGPDGPPGPMGPPGLPGLKGDSGP
KGEKGHPGLIGLIGPPGEQGEKGDRGLPGPQGGSGAKGEQGITGPSGALGPPGPPGLPGP
PGPKGAKGSSGPTGPKGENGHPGPPGPPGPPGEVIQPLPIQSSKRTRRNIDASQLMDDVN
SDNYVDYADGMEEIFGSLNSLKLEIEQMKHPLGTQHNPARTCKDLQLCHPDFPDGEYWVD
PNQGCSRDSFKVYCNFTAGGETCIFPDKKSEGARITSWPKENPGSWFSEFKRGKLLSYVD
SDGNPIGVVQMTFLRLLSASAHQNVTYNCFQSVAWHDATVGNYEKAIRFLGSNDEEMSYD
NNPFIRAVLDGCAAKKGYQKTILEINTPKVEQVPIVDIMFNDFGEASQKFGFEVGPACFM
G
NT seq
3966 nt
NT seq
+upstream
nt +downstream
nt
atgctgatgctgccgttccggttcagcgggggaggagacagcagctccaaagggcccctg
gtctctgcccaggagtcccaagcgcaagccatcctgcagcaggcaagactggctttgagg
ggaccggcgggcccaatgggactgactgggagaccaggccccatgggacccccaggcggt
ggaggaatcaaaggtgaaccgggagatatggggcctcagggtccacgaggggtacaaggc
cctccgggtccatcagggaaaccaggacgccggggacgggctggcagcgatggtgctcga
gggatgccaggccaaacaggaccaaagggtgaccgaggttttgatggcctggctgggttg
cctggggaaaaggggcacaggggtgatcctggtccctcaggtcctccaggagccccaggt
gaagatggggaaaggggtgacgacggagaagttggacctagaggtctccccggcgaacct
ggtccccgtggtttgcttggaccaaagggacctccagggccaccaggacctccgggcatt
gctgggatggatggacagactggccctaaggggaacgtgggtcctcaaggtgagcctgga
ccaccaggtcaacagggaagtccaggcgctcagggtcttcctggtcctcaaggtccaatt
ggagccccaggagataaaggtcccctgggaaaacctggccttcctggtatgcctggagca
gatggtcccccgggccaccctggcaaagaagggcctcctggtgagaaggggacccagggt
ccagccggccctcagggtccaattgggtatcccggtccacgtggagtgaagggagctgac
ggcatccgtggcttgaaaggaacaaagggcgagaagggtgaagatggcttcccaggattc
aaaggcgacatgggcattaaaggcgacaggggtgaaattggccctcctggtcctcgtggt
gaggatgggccagaaggcccgaaaggtcgcggtggtcccaatggagaacctggtccacta
ggtcctgctggagaaaagggaaagcttggtgttcctggcctgccaggataccctggaaga
cttggccccaagggttccatcggattcccggggttcgcaggagccaacggagagaaagga
ggacggggcactcctggcaaacctgggccgagaggacaacgaggtcccacgggtccccga
ggagaacgcggccagcgaggcatcacagggaaacctggtccaaagggcaattctggtgga
gatggacctccaggacctccaggggaaagggggcctccggggcctcaaggaccaacggga
tttccgggaccaaaaggccctccgggtcctccaggaaaagatggattgccaggccatcct
ggacagagaggtgaaacgggtttccaaggcaagacgggtccacccggacctccaggtgtt
gttggcccccagggccccacaggagaaacaggtccgatgggtgaacgtggccatccgggc
cccccagggccccctggtgaacagggacttcctggcttggctggaaaagaaggaacaaag
ggtgacccaggccccgccggtttgcccgggaaagacggcccaccaggcttcagaggcttc
cccggtgaccgaggactccccggcccaattgggcctgtggggctgaagggcaacgaagga
cccccgggacctcctggtccagcaggctccccaggggagcgaggtcctgcaggagcagct
ggcccaatcggtctgccaggacgccctggaccccaagggccctctggtcctgcgggtgag
aaaggaaccccgggtgagaaaggccctcaaggcccagccggacgagatggcatccaaggc
ccagttggacttccaggccccgcaggtcctgttggccccccaggggaggatggagacaag
ggtgaaattggtgaaccaggacagaaaggaaacaaaggtgacaaaggagaacagggtcca
ccaggtcccatcggtccacagggcccaattggccaaccaggtccagcgggagctgatgga
gaacctggcccacgagggcaacaaggactttttggtcagaaaggtgatgaagggccaaga
ggatttcctggccctccaggtccagttgggttgcagggcttacctggacctccaggtgaa
aagggggaaactggagatgttggtcaaatgggccctccaggtcctcctggacccagaggc
ccaggaggaccccctggagctgatgggccacaaggtccatcaggtgggattggaaatcct
ggagccgttggtgaaaagggagaacctggagaagcaggagagcctggcctgcctggagac
tctggaccactaggtcctaaaggagagagaggggaaaaaggtgaagcaggcccttctggg
gctgctggccccccaggcccaaaaggtcccccaggagatgatggtcccaaagggagcccg
ggtccagttggctttccaggcgatccaggccctccaggtgaacctggtccagctggtcag
gatggtccagcaggtgataaaggagatgatggtgaacctggccaaactggctcccctggt
ccaactggagagccaggcccttcaggcccaccagggaagagggggccgcctggaccagca
ggacctgaaggccgtcaaggagagaaaggtgctaagggtgaatcaggtttggaaggacct
cctgggaaaacgggtcctgttggtcctcagggacctccaggaaagccaggtccagatgga
ctacggggaatacctggcccagtgggtgagcaaggacttccaggttcgccaggcccagat
ggacctcctggcccgatgggtccacctggtttacctggcctgaaaggcgattcaggtcca
aagggagaaaagggtcatcctggactgattggtctaattgggcctcctggtgagcaagga
gaaaagggagatcgaggactgccaggacctcaaggaggatcaggggctaaaggagaacag
ggtatcacaggtccctctggtgcacttggccctcctggtcctccagggctgccgggtccc
cctggtccaaaaggtgctaaaggatcttctgggccaacgggtccaaagggcgaaaatggt
catcctggcccaccagggcctcctggtcctccaggagaagtaatccaaccccttccaatc
cagtcctccaagcggacccggagaaacatcgatgccagccagctgatggatgatgtcaat
tccgacaattacgtggactatgccgatggcatggaggagatttttggctccttaaactct
ctgaaactggaaattgagcagatgaaacatcccttaggcacccagcacaatccagctcgt
acttgcaaggatctgcaactctgtcacccagatttcccagacggagaatattgggtagac
ccaaatcaaggctgttcccgggattccttcaaagtttactgtaattttactgctggtggg
gaaacttgcatcttcccagataagaagtccgagggagctaggattacttcatggcccaag
gaaaacccaggctcctggttcagtgaattcaagcgcggtaaactgctctcctacgtggat
tctgacggcaaccccattggagtggtgcagatgaccttcctgcggcttctgagtgcatcc
gctcaccaaaacgtcacctacaactgcttccagtctgtggcgtggcacgatgccaccgtg
ggcaactacgagaaggccatccgtttcctgggctctaatgatgaagagatgtcctatgac
aacaaccctttcatcagggcggttcttgacggctgtgcagcaaagaagggctatcaaaag
acaatcttagaaatcaacacacccaaagttgagcaagtccccattgttgacatcatgttc
aatgactttggggaagcgtctcagaagtttggatttgaggtgggaccggcttgcttcatg
ggctga
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