Python bivittatus (Burmese python): 103057686
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Entry
103057686 CDS
T03091
Symbol
PCF11
Name
(RefSeq) pre-mRNA cleavage complex 2 protein Pcf11
KO
K14400
pre-mRNA cleavage complex 2 protein Pcf11
Organism
pbi
Python bivittatus (Burmese python)
Pathway
pbi03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
pbi00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
103057686 (PCF11)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pbi03021
]
103057686 (PCF11)
03019 Messenger RNA biogenesis [BR:
pbi03019
]
103057686 (PCF11)
Transcription machinery [BR:
pbi03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
103057686 (PCF11)
Messenger RNA biogenesis [BR:
pbi03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Pre-mRNA cleavage factor IIm (CFIIm)
103057686 (PCF11)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PCF11_RFEG_rpt
PCF11_charged
CID
Pcf11_helical
Pfc11_Clp1_ID
Pcf11_C
zf_PCFS4
SHOCT
VHS
Motif
Other DBs
NCBI-GeneID:
103057686
NCBI-ProteinID:
XP_007437202
UniProt:
A0A9F2WCH9
LinkDB
All DBs
Position
Unknown
AA seq
1728 aa
AA seq
DB search
MSGGGTTASEGDASGGGAGGGGSSEAACRDYQSSLEDLTFNSKPHINMLTILAEENVPFA
KDIVSLIEAQIAKAPSNEKLPVMYLMDSIVKNVGREYLAAFTKNLVSTFVNVFEKVDENT
RKSLFKLRSTWDEIFPLKILYALDVRVNSVDPAWPVKPLPPNVNTSSIHVNPKFLSKSPE
EPAAPSSTVCSLPVSCSAVSSTPIVPEIQKNLTQEQLIRQQLLAKQKQLLELQQKKLELE
LEQTKAQLAVSLSVQQSGSNLSQTSLKQHVPQPPHMPIKAPHQVCLPPEKNRLSPLPDAK
IANRDPRLNRTSQHSSHSKDQSHRKDFIINPVSQPDPKTSKTLQSEKQNTTKPEKLKQNE
KLQKKEFDQTDAKSKSKSPSPLQNKLLHAKETRNQECENPRVSEISKRDPRLKKHLLEKP
DGKDDDIKEKRRSVERKDKEEHRSVGGRNKIINGIVQKQDPNTEESEKQSGKPGRSSTRK
RSRSPRSRSPSAHSPKRRERRSPKRRLRSLSPSGPKIGKPRQSGPKQSHVEDFGSGARDE
RSSNKRSIKQEVRDSRRLKKTHEDRPQEGMNQHSSKSNSEPKENVENWQSSKSSKRWKSG
WEENKNPQLTEEHQGLCKSPHQRHRDTWATNKGVPSPRAPKQQHRLSVDANLQIPKELTL
ANKREILKKANERLSSGEITQDDFLVLCHKIRQLFQYQEGKHRCEWDTTTGEKGISKKKP
LLSESDLIYHEHKAKLKRTQVQHSFPRLNMIDAEEILDYHLTDGFLSGMDCEQKNKCGGQ
FGERSRRHSPVGGSRPYSDNSPHDGRRRHDEPNASKGLREEQRINDIFKRTRYEDTEKQF
TDIPGSRFGVSDGKQRFSSLIEDRSHFEGSPRHSGTRAGGDGQAGHFEGPANATPRIEGP
QAQTNLRFEGSLGQPASQFDGPQGQSGGKGSHMFDGPPAQLGGGPLRFDGPSGQVSAGSA
IRFEGPIGQPGGGLRFEGPSGQSVGGMRFEGTHGQPSGGMRFEGPHGHATAGIRFESPHG
QSSAGMRFDGLHDQPSNIRFDGQPSGGLRFEGPHGQPSNAIRFEGPHDRPVGPHGPPGGG
IRFEGPHGHPVGPLGQQGSGIRLEGPHMQPVGSLGQPGSNMQFEAPHGQPIGPHGQPASG
LRFEGPHGQPVGPHGQPLGSRFEGPHSQPLGPHGQLGISPRFEAPSVQTGGGLRFEGPIN
QIRFDGCQSRFDGQPGQPSLLQRLDGLHVQPGPRFEMGPTQTPPRFDGPPGQQVQPRFDT
LLQRFDDPQHPATRYDILLGHQGPRIENVANHPASRLETPPYGQTGPYNEAPNQPPYNGA
SQGMQFQRPDQIFDNPQGPNFNGPPVSGAQHFPSTINRAPGPFYDDKNLQGPQYRNFSNI
TVGNVQPPQQVSVLSVSSGQPFSQGQPLLPVHTPNPGGFVQNQQGNIPLSYPDNHLGQLD
VNELFSKLLSTGILKSLQPDSSSSQVSEVSTQPTPEEEEDDQDQNEDVPDLTNFVIEELK
QRYDSVINRLYTGIQCYSCGMRFTTSQTDVYADHLDWHYRQNRTEKDVSRKITHRRWYYS
LTDWIEFEEIADLEERAKSQFFEKVHEEVVLKTQEAAKEKEFQSVPAGPAGVDESCEICQ
EQFEQYWDEEEEEWHLKNAIRVEEKIYHPSCYEDYQKTSSFDSTPSPSKTPVENPLNIML
NIVKQEVQDSCNSPKVKEEPEEKPNDCIDGNTPESAEIKTEPEKVESV
NT seq
5187 nt
NT seq
+upstream
nt +downstream
nt
atgtcgggcggcggcacgacggcgtccgagggggacgccagcggtggcggcgccggtggc
ggcggcagcagcgaagccgcctgccgcgactaccagtcgtcgctggaagacctgacgttc
aacagcaaaccgcacatcaacatgctgaccatcctggccgaggagaacgtgcccttcgcc
aaggacatcgtctcgctgatcgaggcgcaaatcgccaaggctccttctaatgagaaactt
cctgttatgtacctaatggactccattgtcaagaatgttggacgagaatatcttgctgca
tttactaaaaacctagtttcaacatttgttaatgtgtttgaaaaggtggatgaaaatact
aggaaaagtttatttaaattgcgttccacgtgggatgaaattttccctttgaagattctc
tatgctctcgatgtgcgggtgaattcagttgaccctgcttggcctgttaagccgctaccc
cctaatgtgaatacttctagcatccatgtgaatcctaagtttttaagtaaatcgcctgag
gaacctgctgcacctagctctacagtctgttctcttcctgtgtcctgttctgctgtgtcc
tctactccaattgttcctgaaatacaaaagaacttaacgcaagagcagctaataagacaa
cagctgctggcaaaacaaaaacagttgttagaacttcaacagaagaaattagaacttgaa
ctagaacagacaaaagcacagctggctgtttcccttagtgttcagcaaagtggatctaat
ctgagccaaacatccttaaaacaacatgtgccgcagccacctcacatgccaattaaagct
cctcatcaagtttgtctgccacctgagaaaaaccgtttgtctccacttcctgatgccaaa
attgccaatagagatcctcgtcttaatagaacaagtcagcactcttctcattctaaagat
cagagtcataggaaagacttcataattaatccagtcagtcagcctgacccaaaaactagc
aaaactctacaaagtgaaaagcaaaatacaacaaagccagaaaaattaaaacagaatgag
aaactgcagaagaaagagtttgatcaaacagatgcaaaatcaaaatcaaaatcaccatct
cctttgcagaataagctgcttcatgctaaagaaaccagaaatcaagaatgtgagaatccc
agagtgtctgaaataagcaagagagatcccagattaaaaaagcatcttctagagaaacca
gatggtaaagatgatgacataaaagaaaaaagaagaagtgtggagagaaaagacaaagag
gaacatagatcagttggtggtagaaataaaataattaatggcattgtacaaaagcaagat
cccaatacagaagagtcagagaaacagagtggaaaaccaggaaggtcaagtactaggaaa
aggtcacgttctcctagatctcgatcaccatctgcacattctccaaaacgaagagaaagg
aggtcacctaaaagaaggctcaggagtctttctccatctggacctaagataggaaaacca
cgacagtctgggccaaaacaatcacatgtagaggattttggttcaggagcacgggatgaa
agaagttctaataagaggagcattaagcaggaagtgagagattcaaggaggctgaagaaa
acccatgaagaccgaccgcaagaaggaatgaatcagcattcttctaagtcaaattcagaa
cccaaagaaaatgtggagaattggcaaagttccaaatcaagcaaaagatggaaatctggc
tgggaggaaaataaaaatcctcaacttactgaagagcatcaaggactttgtaaatcgcct
catcagaggcacagggatacatgggcaactaataaaggagttccttcacctcgcgcacca
aagcagcaacatcgattaagtgtagatgctaatttgcagatacccaaagaactgaccttg
gcaaacaagagagagatacttaagaaggcaaatgaacgtctctcatctggtgaaataaca
caggatgatttccttgttctgtgtcataagattcgccaacttttccagtatcaggaagga
aagcatagatgcgagtgggatactacaacaggtgaaaaggggatttcaaaaaagaagccc
ttattgtctgaatcagatttaatatatcatgaacataaagctaagctaaaaagaacacaa
gttcaacattcatttccaagactcaatatgatagatgctgaagaaatattagactatcac
ttaactgatggatttctttctggaatggactgtgagcagaaaaacaaatgcgggggtcag
tttggtgaaagatcaagacgacattctcccgttggtggtagcagaccatactctgataac
tccccacacgatggcaggagaagacatgatgagccaaatgcctcgaaaggtcttcgagaa
gagcagaggatcaatgacattttcaagcgaacaagatatgaagatacagagaaacagttc
actgacattccaggatcacgatttggggtctctgatggaaagcaaagatttagttcattg
attgaggacagatctcattttgagggttctcctagacattctggcacaagggcaggtgga
gatggacaagcaggtcattttgaagggccagctaatgcaactcctcgaattgaagggcca
caagcacagactaatttaaggtttgaaggatctctaggtcagccagcctctcagtttgat
gggccccaaggacagtctggaggaaaaggttctcacatgtttgatgggccacccgcacag
cttggtggtggtcccttgaggtttgatgggccctcagggcaagttagtgcagggagtgct
atacggtttgagggtccaataggacaaccagggggaggtttaagatttgaggggccttca
ggccaatctgtgggtggaatgagatttgaagggacccatggtcaaccctcaggaggaatg
aggtttgagggacctcatggtcatgcaactgctggtattaggtttgagagtcctcatggc
cagtcttctgctggaatgagatttgacgggttgcacgatcagccttctaatataagattt
gatggccagccttcaggtggactgaggttcgaagggcctcatggccaaccttcaaatgcc
ataagatttgaaggacctcatgaccggccagtgggacctcatggtccaccaggaggtgga
ataagatttgagggaccacatggacaccctgtagggccgcttggtcaacagggatctggt
ataagattagaaggcccgcacatgcaaccagtggggtcgcttggacaaccaggaagtaat
atgcagtttgaagcaccacatgggcagcctattggtccacatgggcagcctgcaagtggt
ctgagatttgagggtcctcatgggcagcctgtagggccacatggtcaaccccttggctct
aggtttgaggggcctcacagtcagcctctgggaccacatgggcagttgggaatttctccc
aggtttgaggcaccttctgttcaaactggaggtgggcttagatttgaagggcctattaac
cagataaggtttgatggctgtcagtcaagatttgatggtcaacctggtcagccatcactt
ttacaaagactggatggattacatgtacagcctggtccaaggtttgaaatgggtcctact
caaacaccacctcgatttgatggtccacctggtcagcaggtccaaccccgttttgataca
ttacttcagcggtttgatgatcctcaacatccggcaacacgatatgacatcctccttggt
catcaaggtccaagaattgaaaatgtagccaaccatcctgcctcaagattagagacacca
ccatatggacaaactggcccttataatgaagctcccaatcagccaccttacaatggggca
tcacaaggaatgcagtttcagagacctgaccaaatatttgataacccccaaggaccaaac
ttcaatggaccacctgtttctggagcacaacactttcctagtacaattaacagggcacca
ggacctttttatgacgacaagaatcttcagggccctcagtacagaaattttagtaatata
acagtgggaaatgttcagccaccacagcaggtatccgttctgtcagtatcttctggccag
cctttcagtcaagggcagccactattgccagttcatacaccaaatcctggaggttttgtt
caaaatcagcaaggaaacatcccactttcctaccctgataatcatcttggacaacttgat
gtgaatgagttattctcaaaactactctctacaggaatcctaaaatctttacagcctgat
tcatcttcatcacaagtcagtgaagtttcaactcaaccaactccagaggaagaagaggat
gatcaagatcagaatgaggatgtcccagacttaactaattttgtgatagaagaactaaaa
caacgctatgatagtgttataaacaggctttatactggcattcagtgttactcttgtgga
atgaggtttacgacttcacaaacggatgtgtatgcagaccatttggattggcactatcgc
cagaaccgcacagaaaaagatgttagcaggaaaatcactcacagaagatggtactacagt
ttaacagattggatagagtttgaagaaatagctgatttagaggagcgtgcaaagagtcag
ttctttgaaaaagtgcatgaagaagttgtattaaaaactcaagaagctgctaaggagaag
gagtttcagagtgtccctgcaggaccagctggagtggatgagagctgtgaaatctgccag
gagcaatttgagcaatattgggatgaagaagaggaggagtggcacttgaagaatgcaatt
cgtgtagaagaaaagatctaccatccatcatgttatgaagattatcaaaagacttcatca
tttgattctaccccatctccaagcaagactcctgtagaaaacccactaaatattatgttg
aatattgtcaaacaagaagtacaggactcctgtaacagccccaaagtcaaagaagaacca
gaggaaaagcctaatgattgcattgatgggaacacacctgaatctgctgaaattaaaaca
gaaccggaaaaggttgagtcagtttaa
DBGET
integrated database retrieval system
